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The map label for this gene is omp85 [H]

Identifier: 73541562

GI number: 73541562

Start: 2048245

End: 2050599

Strand: Reverse

Name: omp85 [H]

Synonym: Reut_A1873

Alternate gene names: 73541562

Gene position: 2050599-2048245 (Counterclockwise)

Preceding gene: 73541563

Following gene: 73541561

Centisome position: 53.87

GC content: 60.85

Gene sequence:

>2355_bases
ATGGAATCAAAGAGGGGATCAAGATTGATCAGACATAAGCGCGTCTCGCTGGGCTTGCTCGCGAGTGCCGTTATTGCAGC
CTGGAGCCCGGCGGGCTGGGCCGCCGATCCGTTTGTCGTCAAGGACATCCGTGTTGAGGGCCTGCAACGCGTGGAACCTG
GTACGGTCTTCGGCTACCTTCCGGTCCGCGTCGGCGAAACGTTCACCGACGACAAGGGCGCCGACGCCATCCGCGCGCTG
TATAACACCGGTTTCTTCAAGGACGTGCAGATCCGCGCCGAAGAGGGCGTGCTGGTCGTGCAGGTCGAAGAACGTCCCGC
CATTTCGCAGCTTGAGTTCGTCGGCATCAAGGAATTCGACAAGGACACGCTGCGCCGCTCGCTGCGTGCCGTGGGCGTTG
CTGAAGCGCGTTACTACGACAAGGCCCTGATCGACAAGGCCGAGCAGGAACTCAAGCGCCAGTACGTGGCCCGCGGCTAC
TACGCGGCCGACGTGCAGACCACGGTGACGCCGGTGGACCGCAACCGCGTGTCGGTGGTGTTCAACGTGGAAGAAGGCCC
GGTCGCCAAGATCAAGCAGATCAATATCGTCGGCAACAAGGCTTTCAAGGAAAGCACGCTGCGCGACGAGATGCAGCTGT
CGACGCCGAACTGGCTGTCCTGGTACACCAAGAACGACCTCTATTCCAAGCAGAAGCTCACGGCTGACCTGGAAGCACTG
CGTTCGTACTACCTGAACCGCGGCTACCTGGAATTCGCCATCGAGTCGACGCAGGTGTCGATCACGCCGGACAAGAAGGA
CATCTACCTGACGCTGAACATCAAGGAAGGCGAACAGTACAAGGTGTCCGATATCCGTCTGGCCGGCGAACTGCTGGGCA
AGCAGGAGGAAATGGAAAAGCTGCTGCAGCTGAAGAAGGGCGACATTTTCTCGTCCGAGAAGCTGACGGCAAGCACCAAG
TCCATTACCGACCTGCTCGGCACCTATGGCTATGCGTTCACCACGATCAACCCGCAGCCGCAGATCGACCAGGAAAAGCG
TGAAGTCGCGCTGACGCTGATGGTCGACCCGGGCCGCCGCGTGTATGTGCGCCGCGTCAACGTGGTCGGCAACAGCAAGA
CCCGCGACGAAGTGGTGCGCCGTGAAATGCGGCAGATGGAAAGCTCCTGGTTCGACAGCGAGAAGCTGACGCAGTCGCAG
GCGCGTATCAACCGCACGGGCTACTTCACCGACACCAACATCACCACTGAAGACGTGCCGGGCGCGCCCGACCAGGTCGA
TGTGAACGTCAACGTGACCGAGAAGCCGACCGGCCAGATCAGCCTCGGCGTGGGCTTCTCGTCCACGGACAAGCTGGTGC
TGCAGGCTGGCCTGCGCCAGGACAACGTGTTCGGTTCCGGTACCAGTCTCGGTCTGGACGTGAACACCGCCAAGTCGTTC
CGTACCATCGCGCTGACGCAGTACGACCCGTATTTCACGGTGGACGGCATCAGCCGCTCGACTGACGTCTACTACCGTAC
GTCCCGCCCGCTGTACTACACGGGCGACCAGGACTACAAGATCGAAACGGCCGGCGGCGGCTTCAAGTTCGGTGTGCCGT
TCTCGGAAGTCGATACCGTTTTCTTCGGCATCGGCTACGAATGGACCCGTATCTCGGTGTCGCCGAACACGCCGAGCCAG
TACGTGAAGTTCCTGCACGACATCGGCAAGATGCCGGCAGGCCAGACGACCGGCACGGCTTCGCCGATCAACAACTTTCC
GTTCACGATCGGCTGGGCGCGTGACCGCCGTGACTCGGCGCTCGTGCCGACCAAGGGCCCCTACACGCAGGCCAACCTGG
AAGTCGGCATCCCGGGCGGCGACGTGCAGTACTACCGTGCCAGCGTTCAGCAGCAGTACTTCTATCCGATTTCGAAGGCC
TTCACGCTGGCCCTTAACGGTGAAGTCGCCTACGGCCATGGCTACGGCAACACGCCGTTCCCGGTGTACAAGTACTTCTA
TGCCGGTGGTATCGGCTCGGTGCGCGGCTACCAGACCAGCACGCTGGGTCCGAAGGACCAGAACGGCAACCCTGTCGGTG
GCGCGTCCAAGATGATCGGTAACGTCGAATTCATCTTCCCGCTGCCGGGTTCGGGTGTGGATCGTACGCTGCGTCTCTTC
ACGTTCTTCGACTTCGGTAACGTGTATCAGGAAGGTGCACCGCTGTCGTTCAGCGAGCTGAAGTATTCCACCGGTTTCGG
TATGTCGTGGTTGTCGCCGATCGGTCCGCTGAAGATCAGCATGGGCTTCCCGCTGAAGAAGGACAATACCGACAAGGTTC
AGCGCTTCCAGTTCCAGATCGGCACTGCGTTCTGA

Upstream 100 bases:

>100_bases
AGGAGCAGTACTGGCAAACAGGGCGATCGTGTTGCCGACACCGTCGCCCGGGATGCTATTGACAGGCGCAGTCCCACGAA
GCATCGGAGCGCAATCCTGG

Downstream 100 bases:

>100_bases
TTCTGTAAAAGGATCTGTTTCATGAATACAAAATCCAAACTGGTCAAATCCCTGAGCGCCGCCGCTGTGGCAGCTGCAGC
GCTGTGTGCCGCGGCTCCGG

Product: surface antigen (D15):surface antigen variable number

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MESKRGSRLIRHKRVSLGLLASAVIAAWSPAGWAADPFVVKDIRVEGLQRVEPGTVFGYLPVRVGETFTDDKGADAIRAL
YNTGFFKDVQIRAEEGVLVVQVEERPAISQLEFVGIKEFDKDTLRRSLRAVGVAEARYYDKALIDKAEQELKRQYVARGY
YAADVQTTVTPVDRNRVSVVFNVEEGPVAKIKQINIVGNKAFKESTLRDEMQLSTPNWLSWYTKNDLYSKQKLTADLEAL
RSYYLNRGYLEFAIESTQVSITPDKKDIYLTLNIKEGEQYKVSDIRLAGELLGKQEEMEKLLQLKKGDIFSSEKLTASTK
SITDLLGTYGYAFTTINPQPQIDQEKREVALTLMVDPGRRVYVRRVNVVGNSKTRDEVVRREMRQMESSWFDSEKLTQSQ
ARINRTGYFTDTNITTEDVPGAPDQVDVNVNVTEKPTGQISLGVGFSSTDKLVLQAGLRQDNVFGSGTSLGLDVNTAKSF
RTIALTQYDPYFTVDGISRSTDVYYRTSRPLYYTGDQDYKIETAGGGFKFGVPFSEVDTVFFGIGYEWTRISVSPNTPSQ
YVKFLHDIGKMPAGQTTGTASPINNFPFTIGWARDRRDSALVPTKGPYTQANLEVGIPGGDVQYYRASVQQQYFYPISKA
FTLALNGEVAYGHGYGNTPFPVYKYFYAGGIGSVRGYQTSTLGPKDQNGNPVGGASKMIGNVEFIFPLPGSGVDRTLRLF
TFFDFGNVYQEGAPLSFSELKYSTGFGMSWLSPIGPLKISMGFPLKKDNTDKVQRFQFQIGTAF

Sequences:

>Translated_784_residues
MESKRGSRLIRHKRVSLGLLASAVIAAWSPAGWAADPFVVKDIRVEGLQRVEPGTVFGYLPVRVGETFTDDKGADAIRAL
YNTGFFKDVQIRAEEGVLVVQVEERPAISQLEFVGIKEFDKDTLRRSLRAVGVAEARYYDKALIDKAEQELKRQYVARGY
YAADVQTTVTPVDRNRVSVVFNVEEGPVAKIKQINIVGNKAFKESTLRDEMQLSTPNWLSWYTKNDLYSKQKLTADLEAL
RSYYLNRGYLEFAIESTQVSITPDKKDIYLTLNIKEGEQYKVSDIRLAGELLGKQEEMEKLLQLKKGDIFSSEKLTASTK
SITDLLGTYGYAFTTINPQPQIDQEKREVALTLMVDPGRRVYVRRVNVVGNSKTRDEVVRREMRQMESSWFDSEKLTQSQ
ARINRTGYFTDTNITTEDVPGAPDQVDVNVNVTEKPTGQISLGVGFSSTDKLVLQAGLRQDNVFGSGTSLGLDVNTAKSF
RTIALTQYDPYFTVDGISRSTDVYYRTSRPLYYTGDQDYKIETAGGGFKFGVPFSEVDTVFFGIGYEWTRISVSPNTPSQ
YVKFLHDIGKMPAGQTTGTASPINNFPFTIGWARDRRDSALVPTKGPYTQANLEVGIPGGDVQYYRASVQQQYFYPISKA
FTLALNGEVAYGHGYGNTPFPVYKYFYAGGIGSVRGYQTSTLGPKDQNGNPVGGASKMIGNVEFIFPLPGSGVDRTLRLF
TFFDFGNVYQEGAPLSFSELKYSTGFGMSWLSPIGPLKISMGFPLKKDNTDKVQRFQFQIGTAF
>Mature_784_residues
MESKRGSRLIRHKRVSLGLLASAVIAAWSPAGWAADPFVVKDIRVEGLQRVEPGTVFGYLPVRVGETFTDDKGADAIRAL
YNTGFFKDVQIRAEEGVLVVQVEERPAISQLEFVGIKEFDKDTLRRSLRAVGVAEARYYDKALIDKAEQELKRQYVARGY
YAADVQTTVTPVDRNRVSVVFNVEEGPVAKIKQINIVGNKAFKESTLRDEMQLSTPNWLSWYTKNDLYSKQKLTADLEAL
RSYYLNRGYLEFAIESTQVSITPDKKDIYLTLNIKEGEQYKVSDIRLAGELLGKQEEMEKLLQLKKGDIFSSEKLTASTK
SITDLLGTYGYAFTTINPQPQIDQEKREVALTLMVDPGRRVYVRRVNVVGNSKTRDEVVRREMRQMESSWFDSEKLTQSQ
ARINRTGYFTDTNITTEDVPGAPDQVDVNVNVTEKPTGQISLGVGFSSTDKLVLQAGLRQDNVFGSGTSLGLDVNTAKSF
RTIALTQYDPYFTVDGISRSTDVYYRTSRPLYYTGDQDYKIETAGGGFKFGVPFSEVDTVFFGIGYEWTRISVSPNTPSQ
YVKFLHDIGKMPAGQTTGTASPINNFPFTIGWARDRRDSALVPTKGPYTQANLEVGIPGGDVQYYRASVQQQYFYPISKA
FTLALNGEVAYGHGYGNTPFPVYKYFYAGGIGSVRGYQTSTLGPKDQNGNPVGGASKMIGNVEFIFPLPGSGVDRTLRLF
TFFDFGNVYQEGAPLSFSELKYSTGFGMSWLSPIGPLKISMGFPLKKDNTDKVQRFQFQIGTAF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=816, Percent_Identity=36.5196078431373, Blast_Score=508, Evalue=1e-145,
Organism=Drosophila melanogaster, GI45552629, Length=448, Percent_Identity=22.9910714285714, Blast_Score=69, Evalue=2e-11,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 87526; Mature: 87526

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESKRGSRLIRHKRVSLGLLASAVIAAWSPAGWAADPFVVKDIRVEGLQRVEPGTVFGYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEE
PVRVGETFTDDKGADAIRALYNTGFFKDVQIRAEEGVLVVQVEERPAISQLEFVGIKEFD
EEEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCC
KDTLRRSLRAVGVAEARYYDKALIDKAEQELKRQYVARGYYAADVQTTVTPVDRNRVSVV
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCCEEEEE
FNVEEGPVAKIKQINIVGNKAFKESTLRDEMQLSTPNWLSWYTKNDLYSKQKLTADLEAL
EEECCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHH
RSYYLNRGYLEFAIESTQVSITPDKKDIYLTLNIKEGEQYKVSDIRLAGELLGKQEEMEK
HHHHHCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEHHHHHHHHHHCCHHHHHH
LLQLKKGDIFSSEKLTASTKSITDLLGTYGYAFTTINPQPQIDQEKREVALTLMVDPGRR
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCE
VYVRRVNVVGNSKTRDEVVRREMRQMESSWFDSEKLTQSQARINRTGYFTDTNITTEDVP
EEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCC
GAPDQVDVNVNVTEKPTGQISLGVGFSSTDKLVLQAGLRQDNVFGSGTSLGLDVNTAKSF
CCCCEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCE
RTIALTQYDPYFTVDGISRSTDVYYRTSRPLYYTGDQDYKIETAGGGFKFGVPFSEVDTV
EEEEEEECCCEEEECCCCCCCEEEEECCCCEEEECCCCEEEEECCCCEEECCCHHHHCEE
FFGIGYEWTRISVSPNTPSQYVKFLHDIGKMPAGQTTGTASPINNFPFTIGWARDRRDSA
EEECCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
LVPTKGPYTQANLEVGIPGGDVQYYRASVQQQYFYPISKAFTLALNGEVAYGHGYGNTPF
CCCCCCCCEECEEEEECCCCCHHHHHHHHHHHHEEECCCEEEEEECCEEEECCCCCCCCC
PVYKYFYAGGIGSVRGYQTSTLGPKDQNGNPVGGASKMIGNVEFIFPLPGSGVDRTLRLF
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCEEEEE
TFFDFGNVYQEGAPLSFSELKYSTGFGMSWLSPIGPLKISMGFPLKKDNTDKVQRFQFQI
EEECCCHHHHCCCCCCHHHEEECCCCCCHHHCCCCCEEEEECCCCCCCCHHHHEEEEEEE
GTAF
CCCC
>Mature Secondary Structure
MESKRGSRLIRHKRVSLGLLASAVIAAWSPAGWAADPFVVKDIRVEGLQRVEPGTVFGYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEE
PVRVGETFTDDKGADAIRALYNTGFFKDVQIRAEEGVLVVQVEERPAISQLEFVGIKEFD
EEEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCC
KDTLRRSLRAVGVAEARYYDKALIDKAEQELKRQYVARGYYAADVQTTVTPVDRNRVSVV
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCCEEEEE
FNVEEGPVAKIKQINIVGNKAFKESTLRDEMQLSTPNWLSWYTKNDLYSKQKLTADLEAL
EEECCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHH
RSYYLNRGYLEFAIESTQVSITPDKKDIYLTLNIKEGEQYKVSDIRLAGELLGKQEEMEK
HHHHHCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEHHHHHHHHHHCCHHHHHH
LLQLKKGDIFSSEKLTASTKSITDLLGTYGYAFTTINPQPQIDQEKREVALTLMVDPGRR
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCE
VYVRRVNVVGNSKTRDEVVRREMRQMESSWFDSEKLTQSQARINRTGYFTDTNITTEDVP
EEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCC
GAPDQVDVNVNVTEKPTGQISLGVGFSSTDKLVLQAGLRQDNVFGSGTSLGLDVNTAKSF
CCCCEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCE
RTIALTQYDPYFTVDGISRSTDVYYRTSRPLYYTGDQDYKIETAGGGFKFGVPFSEVDTV
EEEEEEECCCEEEECCCCCCCEEEEECCCCEEEECCCCEEEEECCCCEEECCCHHHHCEE
FFGIGYEWTRISVSPNTPSQYVKFLHDIGKMPAGQTTGTASPINNFPFTIGWARDRRDSA
EEECCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
LVPTKGPYTQANLEVGIPGGDVQYYRASVQQQYFYPISKAFTLALNGEVAYGHGYGNTPF
CCCCCCCCEECEEEEECCCCCHHHHHHHHHHHHEEECCCEEEEEECCEEEECCCCCCCCC
PVYKYFYAGGIGSVRGYQTSTLGPKDQNGNPVGGASKMIGNVEFIFPLPGSGVDRTLRLF
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCEEEEE
TFFDFGNVYQEGAPLSFSELKYSTGFGMSWLSPIGPLKISMGFPLKKDNTDKVQRFQFQI
EEECCCHHHHCCCCCCHHHEEECCCCCCHHHCCCCCEEEEECCCCCCCCHHHHEEEEEEE
GTAF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]