| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yfjG [H]
Identifier: 73541549
GI number: 73541549
Start: 2036174
End: 2036611
Strand: Reverse
Name: yfjG [H]
Synonym: Reut_A1860
Alternate gene names: 73541549
Gene position: 2036611-2036174 (Counterclockwise)
Preceding gene: 73541551
Following gene: 73541548
Centisome position: 53.5
GC content: 57.08
Gene sequence:
>438_bases ATGGCAGACGTCCATAAATCCGTCCTGCTCGGCTATTCGGCTGCGCAGATGTACGACCTGGTCACGCGCGTGGAGGACTA TCCGAAGTTCCTCCCGTGGTGTGGCGGCGTGGAGGTCTTCGAGCAGACCGATACCACGCTGGATGCAAAGATCCACATCC AGTTCAAGGGTATCCAACAGTTCTTCCACACGCGCAATTCGCAGGAGCGGCCCACACGCATCGACATGACTTTCGCCGAT GGACCGTTCAAGACCTTCAATGGGTCCTGGCGCTTCACGCCGCTGCGCGAGGACGCGTGCAAGATCGAGTTTCACCTTCA CTACGAGTTTTCCAGCCTTCTGCTGGAAAAGATCATCGGTCCTGTATTCAGCATCATCGCGAATACCTTCGTGGATGCCT TCGTCAAGCGCGCCGAGGTGGTCTATGGCGCAAGCTGA
Upstream 100 bases:
>100_bases GCAAACCAGCCCCGGTACCGGTCCATGCCCGCCGCGCGCGAGATTCGACCTCGCGTGATATTGCGGTGCAGTATGGCCGG GAACCTGATTTTCCCCATTC
Downstream 100 bases:
>100_bases CATGGTGCGCATTTCGGTGTGCTACGCCAGGCCGGACTCGGTGTTCCTCAAGGAGTTCGACGTGCTGCAAGGTACGACGA TTGCCGCTGCCATTGTGAGT
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MADVHKSVLLGYSAAQMYDLVTRVEDYPKFLPWCGGVEVFEQTDTTLDAKIHIQFKGIQQFFHTRNSQERPTRIDMTFAD GPFKTFNGSWRFTPLREDACKIEFHLHYEFSSLLLEKIIGPVFSIIANTFVDAFVKRAEVVYGAS
Sequences:
>Translated_145_residues MADVHKSVLLGYSAAQMYDLVTRVEDYPKFLPWCGGVEVFEQTDTTLDAKIHIQFKGIQQFFHTRNSQERPTRIDMTFAD GPFKTFNGSWRFTPLREDACKIEFHLHYEFSSLLLEKIIGPVFSIIANTFVDAFVKRAEVVYGAS >Mature_144_residues ADVHKSVLLGYSAAQMYDLVTRVEDYPKFLPWCGGVEVFEQTDTTLDAKIHIQFKGIQQFFHTRNSQERPTRIDMTFADG PFKTFNGSWRFTPLREDACKIEFHLHYEFSSLLLEKIIGPVFSIIANTFVDAFVKRAEVVYGAS
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Homo sapiens, GI13376737, Length=139, Percent_Identity=30.2158273381295, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI151101386, Length=139, Percent_Identity=28.0575539568345, Blast_Score=74, Evalue=6e-14, Organism=Homo sapiens, GI151101384, Length=139, Percent_Identity=28.0575539568345, Blast_Score=74, Evalue=7e-14, Organism=Escherichia coli, GI1788972, Length=144, Percent_Identity=43.75, Blast_Score=133, Evalue=4e-33, Organism=Caenorhabditis elegans, GI115532702, Length=140, Percent_Identity=29.2857142857143, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16678; Mature: 16547
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVHKSVLLGYSAAQMYDLVTRVEDYPKFLPWCGGVEVFEQTDTTLDAKIHIQFKGIQQ CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEEEEEHHHHH FFHTRNSQERPTRIDMTFADGPFKTFNGSWRFTPLREDACKIEFHLHYEFSSLLLEKIIG HHHCCCCCCCCCEEEEEECCCCCEECCCCEEECCCCCCCEEEEEEEEECHHHHHHHHHHH PVFSIIANTFVDAFVKRAEVVYGAS HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADVHKSVLLGYSAAQMYDLVTRVEDYPKFLPWCGGVEVFEQTDTTLDAKIHIQFKGIQQ CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEEEEEHHHHH FFHTRNSQERPTRIDMTFADGPFKTFNGSWRFTPLREDACKIEFHLHYEFSSLLLEKIIG HHHCCCCCCCCCEEEEEECCCCCEECCCCEEECCCCCCCEEEEEEEEECHHHHHHHHHHH PVFSIIANTFVDAFVKRAEVVYGAS HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7524073; 9205837; 9278503 [H]