Click here to switch to the map view.

The map label for this gene is cyt [H]

Identifier: 73541472

GI number: 73541472

Start: 1945858

End: 1946178

Strand: Reverse

Name: cyt [H]

Synonym: Reut_A1783

Alternate gene names: 73541472

Gene position: 1946178-1945858 (Counterclockwise)

Preceding gene: 73541473

Following gene: 73541466

Centisome position: 51.13

GC content: 64.49

Gene sequence:

>321_bases
ATGAAGATCGAATGGATGGCGCTGGTCGTGGCTTCGCTGCTGCCTTGCGCGGCACTGGCGGGCACTGCGGCCGATATGCA
GGCCGTGGCTGACAAGAATGGGTGCTTCGCTTGCCATGGCATGCAAGCGAAGGTGATCGGCCCGGGATTTGCCGAGGTGG
CGGCCAAGTACAAGGGAGACAGCCAGGCGGCCGATCGTCTGGGCAAGAAGATCCGCGAAGGGGGCAAGGGCGTGTGGGGG
CCCGTTCCAATGCCGGCGCACGGGAATCTCGGCGAGGCGGATGCCCGGAAACTGGCGGAATGGGTGCTGAGTATCGGGTA
A

Upstream 100 bases:

>100_bases
GCTGCACAAGGGCTGAACGACAGGCAGGTTGATGGCTGGAGACGCTGGCATCCCTGTGCGGATGCCAGCGTTCTCGCAAC
GCGAAACAGTGGGATACGGT

Downstream 100 bases:

>100_bases
GCGGTATGGTGGTCCGCGGCACGACCGTTGCAGTTTGTCGTGTCGGGACCCGCCCATCAAAACATCGCTTGTGTCATTCG
TTCCCGCTGCTCAGCCGCAA

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKIEWMALVVASLLPCAALAGTAADMQAVADKNGCFACHGMQAKVIGPGFAEVAAKYKGDSQAADRLGKKIREGGKGVWG
PVPMPAHGNLGEADARKLAEWVLSIG

Sequences:

>Translated_106_residues
MKIEWMALVVASLLPCAALAGTAADMQAVADKNGCFACHGMQAKVIGPGFAEVAAKYKGDSQAADRLGKKIREGGKGVWG
PVPMPAHGNLGEADARKLAEWVLSIG
>Mature_106_residues
MKIEWMALVVASLLPCAALAGTAADMQAVADKNGCFACHGMQAKVIGPGFAEVAAKYKGDSQAADRLGKKIREGGKGVWG
PVPMPAHGNLGEADARKLAEWVLSIG

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10949; Mature: 10949

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEWMALVVASLLPCAALAGTAADMQAVADKNGCFACHGMQAKVIGPGFAEVAAKYKGD
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHCCCC
SQAADRLGKKIREGGKGVWGPVPMPAHGNLGEADARKLAEWVLSIG
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIEWMALVVASLLPCAALAGTAADMQAVADKNGCFACHGMQAKVIGPGFAEVAAKYKGD
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHCCCC
SQAADRLGKKIREGGKGVWGPVPMPAHGNLGEADARKLAEWVLSIG
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]