| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73541447
Identifier: 73541447
GI number: 73541447
Start: 1913134
End: 1914744
Strand: Reverse
Name: 73541447
Synonym: Reut_A1758
Alternate gene names: NA
Gene position: 1914744-1913134 (Counterclockwise)
Preceding gene: 73541448
Following gene: 73541446
Centisome position: 50.3
GC content: 61.45
Gene sequence:
>1611_bases ATGAGCCCGACGACACGAAAGGAAGTTCCGTCCGATGAGCCGCTTATCGACACCACGCCCTATGGCTATGGCCCGGACGA TTTGGTGACCGACGTCACGGAGACCGCGGCGATTACGCAGCACACGCTGAAGCTGCATGGCAAATCGCTCGCCTACACGG CGCGCGCGGGCCATCTGGTGACAACAGACCCATACAGCGCCATGCCGGCCGCCAAGCTGTTCTATGTCGCCTTCACGCTC AATGGCACGGCGGCATCCAAGCGGCCCGTGACGTTCTTCTACAACGGTGGCCCCGGATCGTCATCGGTCTTCCTGCTGCT CGGCTCTTTCGGACCACGCCGGATCAAGACCAGCATGCCCGGCTTCACGCCACCCGCGCCCTACGAGATGGAAGACAACG AGGATTGCCTGCTCGACCATACCGACCTCGTCTTCATCAACCCCGTTGGAACGGGCTATTCCGGCGCGGTCGCACCGGGC ACCAACAAGGACTTCTGGGGCGTGGACGAAGACGCTAGCTGCATCAAGCAGTTCATCAAGCGTTATCTGACGGTGTTCAA CCGCTGGAATTCGCCGAAGTATTTGTTCGGGGAGTCTTACGGAACGCCGCGTACCTGCGTGCTGACATGGCTGCTGCATG AGGATGGCGTGGACCTCAACGGCATCGTGCTGCAATCGTCGATCCTCGACTATTCGCAGGCGGGAAATCCCATCGGGCTG CTTCCTACGCTTGCGGCCGATGCGTGGTTCCACAAGATGGTCACGCTGTCGCCGGTGCCTGCCGAACTGGCGACGTTCAT GGACGACGTGGAGGCGTTTGCCATCGATGCCTACGTCGAGGCGTTATCCGGCTTTCCGAAGTTCGACCAGAAATCGCTCG AGTACCTCAGCGCCATTCTCGGCATCCCGCAGGAAGTCCTGCGCTACTGGAAACTCGACCCCTCGACCGCAAACGGCTCG GTGTTCCTGACCAGCCTGTTGCTGGACAAGGGCCTGGCGGTCGGGGCATACGATGGCCGTGTCACGGCGCAGGACACTGG CATCGCCGAATACATCGCCCCGAATTCCGGCGGCAACGATCCCACCATGACCGCCGTGGGCGGCGTCTATACGGCGATGT GGAATGTGTATCTCAACGAGGAACTGCAGTTCACGTCGACCTCGCCTTTCATGGACCTGAACGACGAGGCCTTTCTCAAC TGGAATTTCGGCCACGTCGATCCCACTGGCGCGCAACGCGGCGGTGTCGAAAGCCTCTACACGGCCGGCGATCTTGCTGC GGCGATGGCGCTGAATCCTTACCTGCGGGTATTCTCGGCGAACGGCTACTACGACGCCGTGACGCCGTTCTTCCAGACCA TCCTCAACTTCCAGAACATGCCGGCCGCCCATGCGGGCATCGCGACGACGCTGACCGTCAGGAACTACCCATCCGGGCAC ATGATTTATCTCGACAATGCGTCCCGTACGGCGATGAAGGCGGACCTGTCCGACTTCTATGCAGGTTCGGACCGCCATGT GGAAGCCATCCAGGCCGCGTTGCCGGTGCAGGAGCAACAGGCGGCGTATGCGGCGCGGTATCGGAGGCGGCTGAGCCGGA CGCCGTATTAA
Upstream 100 bases:
>100_bases TGGGGCGTGCCCAACGGGCAGGGATTGCTCGCCGCGCTGGCTGCGGTCTGACGATCTGGCGCCAGCGGACTTCACCATTT CGCACACGGAGGACAATGCA
Downstream 100 bases:
>100_bases GGGCGGGATTTGCGGGCGCTGCCCTGGGTTGCCCGCCAAAAGTGACGAATCGTGCGTATAGCGAGGTCCCTTCGCTTTCC GAATCTCCTTCTGACATGCC
Product: putative carboxypeptidase
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MSPTTRKEVPSDEPLIDTTPYGYGPDDLVTDVTETAAITQHTLKLHGKSLAYTARAGHLVTTDPYSAMPAAKLFYVAFTL NGTAASKRPVTFFYNGGPGSSSVFLLLGSFGPRRIKTSMPGFTPPAPYEMEDNEDCLLDHTDLVFINPVGTGYSGAVAPG TNKDFWGVDEDASCIKQFIKRYLTVFNRWNSPKYLFGESYGTPRTCVLTWLLHEDGVDLNGIVLQSSILDYSQAGNPIGL LPTLAADAWFHKMVTLSPVPAELATFMDDVEAFAIDAYVEALSGFPKFDQKSLEYLSAILGIPQEVLRYWKLDPSTANGS VFLTSLLLDKGLAVGAYDGRVTAQDTGIAEYIAPNSGGNDPTMTAVGGVYTAMWNVYLNEELQFTSTSPFMDLNDEAFLN WNFGHVDPTGAQRGGVESLYTAGDLAAAMALNPYLRVFSANGYYDAVTPFFQTILNFQNMPAAHAGIATTLTVRNYPSGH MIYLDNASRTAMKADLSDFYAGSDRHVEAIQAALPVQEQQAAYAARYRRRLSRTPY
Sequences:
>Translated_536_residues MSPTTRKEVPSDEPLIDTTPYGYGPDDLVTDVTETAAITQHTLKLHGKSLAYTARAGHLVTTDPYSAMPAAKLFYVAFTL NGTAASKRPVTFFYNGGPGSSSVFLLLGSFGPRRIKTSMPGFTPPAPYEMEDNEDCLLDHTDLVFINPVGTGYSGAVAPG TNKDFWGVDEDASCIKQFIKRYLTVFNRWNSPKYLFGESYGTPRTCVLTWLLHEDGVDLNGIVLQSSILDYSQAGNPIGL LPTLAADAWFHKMVTLSPVPAELATFMDDVEAFAIDAYVEALSGFPKFDQKSLEYLSAILGIPQEVLRYWKLDPSTANGS VFLTSLLLDKGLAVGAYDGRVTAQDTGIAEYIAPNSGGNDPTMTAVGGVYTAMWNVYLNEELQFTSTSPFMDLNDEAFLN WNFGHVDPTGAQRGGVESLYTAGDLAAAMALNPYLRVFSANGYYDAVTPFFQTILNFQNMPAAHAGIATTLTVRNYPSGH MIYLDNASRTAMKADLSDFYAGSDRHVEAIQAALPVQEQQAAYAARYRRRLSRTPY >Mature_535_residues SPTTRKEVPSDEPLIDTTPYGYGPDDLVTDVTETAAITQHTLKLHGKSLAYTARAGHLVTTDPYSAMPAAKLFYVAFTLN GTAASKRPVTFFYNGGPGSSSVFLLLGSFGPRRIKTSMPGFTPPAPYEMEDNEDCLLDHTDLVFINPVGTGYSGAVAPGT NKDFWGVDEDASCIKQFIKRYLTVFNRWNSPKYLFGESYGTPRTCVLTWLLHEDGVDLNGIVLQSSILDYSQAGNPIGLL PTLAADAWFHKMVTLSPVPAELATFMDDVEAFAIDAYVEALSGFPKFDQKSLEYLSAILGIPQEVLRYWKLDPSTANGSV FLTSLLLDKGLAVGAYDGRVTAQDTGIAEYIAPNSGGNDPTMTAVGGVYTAMWNVYLNEELQFTSTSPFMDLNDEAFLNW NFGHVDPTGAQRGGVESLYTAGDLAAAMALNPYLRVFSANGYYDAVTPFFQTILNFQNMPAAHAGIATTLTVRNYPSGHM IYLDNASRTAMKADLSDFYAGSDRHVEAIQAALPVQEQQAAYAARYRRRLSRTPY
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58495; Mature: 58364
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTTRKEVPSDEPLIDTTPYGYGPDDLVTDVTETAAITQHTLKLHGKSLAYTARAGHLV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEE TTDPYSAMPAAKLFYVAFTLNGTAASKRPVTFFYNGGPGSSSVFLLLGSFGPRRIKTSMP ECCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEECCCC GFTPPAPYEMEDNEDCLLDHTDLVFINPVGTGYSGAVAPGTNKDFWGVDEDASCIKQFIK CCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RYLTVFNRWNSPKYLFGESYGTPRTCVLTWLLHEDGVDLNGIVLQSSILDYSQAGNPIGL HHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCEE LPTLAADAWFHKMVTLSPVPAELATFMDDVEAFAIDAYVEALSGFPKFDQKSLEYLSAIL HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH GIPQEVLRYWKLDPSTANGSVFLTSLLLDKGLAVGAYDGRVTAQDTGIAEYIAPNSGGND CCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEECCCCCEEEECCCCCCCC PTMTAVGGVYTAMWNVYLNEELQFTSTSPFMDLNDEAFLNWNFGHVDPTGAQRGGVESLY CCHHHHHHHHHHHHHEEECCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH TAGDLAAAMALNPYLRVFSANGYYDAVTPFFQTILNFQNMPAAHAGIATTLTVRNYPSGH HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCC MIYLDNASRTAMKADLSDFYAGSDRHVEAIQAALPVQEQQAAYAARYRRRLSRTPY EEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPTTRKEVPSDEPLIDTTPYGYGPDDLVTDVTETAAITQHTLKLHGKSLAYTARAGHLV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEE TTDPYSAMPAAKLFYVAFTLNGTAASKRPVTFFYNGGPGSSSVFLLLGSFGPRRIKTSMP ECCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEECCCC GFTPPAPYEMEDNEDCLLDHTDLVFINPVGTGYSGAVAPGTNKDFWGVDEDASCIKQFIK CCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RYLTVFNRWNSPKYLFGESYGTPRTCVLTWLLHEDGVDLNGIVLQSSILDYSQAGNPIGL HHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCEE LPTLAADAWFHKMVTLSPVPAELATFMDDVEAFAIDAYVEALSGFPKFDQKSLEYLSAIL HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH GIPQEVLRYWKLDPSTANGSVFLTSLLLDKGLAVGAYDGRVTAQDTGIAEYIAPNSGGND CCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEECCCCEEEECCCCCEEEECCCCCCCC PTMTAVGGVYTAMWNVYLNEELQFTSTSPFMDLNDEAFLNWNFGHVDPTGAQRGGVESLY CCHHHHHHHHHHHHHEEECCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH TAGDLAAAMALNPYLRVFSANGYYDAVTPFFQTILNFQNMPAAHAGIATTLTVRNYPSGH HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCC MIYLDNASRTAMKADLSDFYAGSDRHVEAIQAALPVQEQQAAYAARYRRRLSRTPY EEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA