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The map label for this gene is hcp1 [H]

Identifier: 73541420

GI number: 73541420

Start: 1870799

End: 1871281

Strand: Reverse

Name: hcp1 [H]

Synonym: Reut_A1731

Alternate gene names: 73541420

Gene position: 1871281-1870799 (Counterclockwise)

Preceding gene: 73541421

Following gene: 73541419

Centisome position: 49.16

GC content: 58.18

Gene sequence:

>483_bases
ATGGACACCATCATCCTCGAGATCACTGATATCAAGGGCAACACCAAGATCACCGGCCATGAAGACAAGATCCAGATCAT
GTCTTTCAGCAATGGTGTATCGATGCACATGAACCGGGATGTCTCGAATTCCGAGCGCACCATGGGTCGCCCGGACTTCC
AGAACATCACCCTCAGCAAGATGACCGACCAGGCCACCCCGGGCCTGTACGGCGCCTGCGCCGGCGGCAAGGACCTTGGC
GTGGTCAAGCTGCTGATGGGTCGCAACGAGGGCGACACGTTCATGCCGCTGATGACCTACACGCTGAAGAACACCATGGT
CAGCAACATCAGCACCGGCGGTGGCGGCAGCGAAGCGATGGACACGTTCTGTCTGGATTTCACCGAGATCAAGGTCGAAT
ACACCAAGCAGGGTTCGGACTCGAAGAAGCAGGGCACGGCCGCTTTCGGCTGGGACCTGGCTACCAACAAGGCCGTTTCC
TGA

Upstream 100 bases:

>100_bases
CGACACCGCCGCGCGGTGCAAGGCGGCCGGACGATTCCGCCCCCTTGCACCGCAGCCAGCCTGCTGACATTACCCGAGTT
TCTCCGGAGCCAAACAAGCC

Downstream 100 bases:

>100_bases
GCGGCAGGCCTGCCTGGCGGACCTGAGCCCGAGGCGATTCCATGGCGACGATCATCAGCGGCGCACCCGTGCCCCTGTTC
GAACGGCTGGCGTCCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MDTIILEITDIKGNTKITGHEDKIQIMSFSNGVSMHMNRDVSNSERTMGRPDFQNITLSKMTDQATPGLYGACAGGKDLG
VVKLLMGRNEGDTFMPLMTYTLKNTMVSNISTGGGGSEAMDTFCLDFTEIKVEYTKQGSDSKKQGTAAFGWDLATNKAVS

Sequences:

>Translated_160_residues
MDTIILEITDIKGNTKITGHEDKIQIMSFSNGVSMHMNRDVSNSERTMGRPDFQNITLSKMTDQATPGLYGACAGGKDLG
VVKLLMGRNEGDTFMPLMTYTLKNTMVSNISTGGGGSEAMDTFCLDFTEIKVEYTKQGSDSKKQGTAAFGWDLATNKAVS
>Mature_160_residues
MDTIILEITDIKGNTKITGHEDKIQIMSFSNGVSMHMNRDVSNSERTMGRPDFQNITLSKMTDQATPGLYGACAGGKDLG
VVKLLMGRNEGDTFMPLMTYTLKNTMVSNISTGGGGSEAMDTFCLDFTEIKVEYTKQGSDSKKQGTAAFGWDLATNKAVS

Specific function: Required for assembly of the protein secretion apparatus HSI-I. Actively secreted during chronic infection of cystic fibrosis patients [H]

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 17325; Mature: 17325

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIILEITDIKGNTKITGHEDKIQIMSFSNGVSMHMNRDVSNSERTMGRPDFQNITLSK
CCEEEEEEEECCCCCEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEHHH
MTDQATPGLYGACAGGKDLGVVKLLMGRNEGDTFMPLMTYTLKNTMVSNISTGGGGSEAM
CCCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHH
DTFCLDFTEIKVEYTKQGSDSKKQGTAAFGWDLATNKAVS
HHHHCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MDTIILEITDIKGNTKITGHEDKIQIMSFSNGVSMHMNRDVSNSERTMGRPDFQNITLSK
CCEEEEEEEECCCCCEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEHHH
MTDQATPGLYGACAGGKDLGVVKLLMGRNEGDTFMPLMTYTLKNTMVSNISTGGGGSEAM
CCCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHH
DTFCLDFTEIKVEYTKQGSDSKKQGTAAFGWDLATNKAVS
HHHHCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]