Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73541162
Identifier: 73541162
GI number: 73541162
Start: 1589396
End: 1590178
Strand: Direct
Name: 73541162
Synonym: Reut_A1468
Alternate gene names: NA
Gene position: 1589396-1590178 (Clockwise)
Preceding gene: 73541155
Following gene: 73541167
Centisome position: 41.75
GC content: 66.16
Gene sequence:
>783_bases ATGGCGGCGCTTGGGCGGGAAGCCGCACTTATAATGCGGCCGTCGTCACTATCACCACGCAAGGACACGTCGATGCAGCA GATTGCGGGACAACGCCGGGTGCCGGCACGGGCCAAGGCCGAGCAGCGCATGCGCGACATCCTGCGGGTCGGCCGCGAGG TGTTTTCCGAGCTTGGCTACGAACGCGCGACCACGACCGAGATCGCGCAGCGGCTCGGCATCTCCGAAGGCACCGTCTTT ACGTACTTCCACAGTAAGCGCGACCTGTGTGTCCGGGTGATCCAGGACTGGTATGACGAGATCATTGCCGCGATCGAGAA TGGCCTGCCGCGCGAGCAGAGCACCAAGGTGCAGCTCGAGTTCTTCGTGCGCACGCATTTGCGGCTGTTCCTGATACAGG GCACGGGACTGTGCGCACTGGTGCTGTCGGAGGGGCGGGCCAAAGGCCAGGGCCTGGATGAAGTGTTCGTGCCGCTGCAA CGGCGCTACACGGCGCCGTTGATGGACCTGCTGGCGCGGGCCCAGGCACGTAAGGAAATCCGGACGGACCTGTCGCTGCG GCTACTGCGTTCGGCCATCCTCGGGCCGATGGAGCACGTCCTGTGGGATGCGGTGGTGAGCGGGCGTCCAGTGGACATCG ACCGGACGGCGAGCGACCTGATCGCGCTGCTCTGGCCAGCGCTGCAACCGCCCGATCTGGATGCCGTCGCGCTCAAGCAG TTCTACGGCGAGGTGGGCGCAGCGCTGGCGCGGGTCAAGCAGGCGGAACCGCCGGCGGAGTAA
Upstream 100 bases:
>100_bases TTTTTCTTTCTGTGCGGTAAAGTTATACCTGCGCTCAGAAAAAATCAACAAAAATTGAGTGTTGGTCAACTATCGTATAA AGTGGATCGACAGGCCTGCA
Downstream 100 bases:
>100_bases CGCTGCGCCTTACCACACGGTCTGGATCATGCCTGGCAGTCGTGCTCCGAAATCTTCCTTGATGGTGTCGGTCTCACCGG CGAGGAAGAGGGTTGCCAGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; TetR Family Regulatory
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAALGREAALIMRPSSLSPRKDTSMQQIAGQRRVPARAKAEQRMRDILRVGREVFSELGYERATTTEIAQRLGISEGTVF TYFHSKRDLCVRVIQDWYDEIIAAIENGLPREQSTKVQLEFFVRTHLRLFLIQGTGLCALVLSEGRAKGQGLDEVFVPLQ RRYTAPLMDLLARAQARKEIRTDLSLRLLRSAILGPMEHVLWDAVVSGRPVDIDRTASDLIALLWPALQPPDLDAVALKQ FYGEVGAALARVKQAEPPAE
Sequences:
>Translated_260_residues MAALGREAALIMRPSSLSPRKDTSMQQIAGQRRVPARAKAEQRMRDILRVGREVFSELGYERATTTEIAQRLGISEGTVF TYFHSKRDLCVRVIQDWYDEIIAAIENGLPREQSTKVQLEFFVRTHLRLFLIQGTGLCALVLSEGRAKGQGLDEVFVPLQ RRYTAPLMDLLARAQARKEIRTDLSLRLLRSAILGPMEHVLWDAVVSGRPVDIDRTASDLIALLWPALQPPDLDAVALKQ FYGEVGAALARVKQAEPPAE >Mature_259_residues AALGREAALIMRPSSLSPRKDTSMQQIAGQRRVPARAKAEQRMRDILRVGREVFSELGYERATTTEIAQRLGISEGTVFT YFHSKRDLCVRVIQDWYDEIIAAIENGLPREQSTKVQLEFFVRTHLRLFLIQGTGLCALVLSEGRAKGQGLDEVFVPLQR RYTAPLMDLLARAQARKEIRTDLSLRLLRSAILGPMEHVLWDAVVSGRPVDIDRTASDLIALLWPALQPPDLDAVALKQF YGEVGAALARVKQAEPPAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29101; Mature: 28970
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALGREAALIMRPSSLSPRKDTSMQQIAGQRRVPARAKAEQRMRDILRVGREVFSELGY CCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ERATTTEIAQRLGISEGTVFTYFHSKRDLCVRVIQDWYDEIIAAIENGLPREQSTKVQLE CCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH FFVRTHLRLFLIQGTGLCALVLSEGRAKGQGLDEVFVPLQRRYTAPLMDLLARAQARKEI HHHHHHHHHEEECCCCCEEHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RTDLSLRLLRSAILGPMEHVLWDAVVSGRPVDIDRTASDLIALLWPALQPPDLDAVALKQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH FYGEVGAALARVKQAEPPAE HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AALGREAALIMRPSSLSPRKDTSMQQIAGQRRVPARAKAEQRMRDILRVGREVFSELGY CCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ERATTTEIAQRLGISEGTVFTYFHSKRDLCVRVIQDWYDEIIAAIENGLPREQSTKVQLE CCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH FFVRTHLRLFLIQGTGLCALVLSEGRAKGQGLDEVFVPLQRRYTAPLMDLLARAQARKEI HHHHHHHHHEEECCCCCEEHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RTDLSLRLLRSAILGPMEHVLWDAVVSGRPVDIDRTASDLIALLWPALQPPDLDAVALKQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH FYGEVGAALARVKQAEPPAE HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA