Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is qheDH [H]
Identifier: 73541155
GI number: 73541155
Start: 1578412
End: 1580568
Strand: Direct
Name: qheDH [H]
Synonym: Reut_A1461
Alternate gene names: 73541155
Gene position: 1578412-1580568 (Clockwise)
Preceding gene: 73541154
Following gene: 73541162
Centisome position: 41.47
GC content: 65.37
Gene sequence:
>2157_bases ATGAACACCTCACAGATGCGTTCCCGCAACCGGTCACGCCGGCCGCACGGCCTGGTGCTGGCCGGCATTGCCGCCGCCAT GGCCATGGCTGGCGTGACCGCGCAAGGCGCAGACGGCCGGCCCGCGACCGCGCAGAAGATACGCGCGAGCACCGCCCGCG TGGACGGTGCGGCCATCCGCGCCAACGAGACTGCTACGCCGAACTGGCCGACCTATGGCCTGGACTATGCCGAGACGCGC TTCAGCAAGCTTGACCAGATCCACGCCGGCAACGTGAAGGACCTCGGCCTGGTCTGGTCCTACAACCTTGAATCCACGCG CGGCGTGGAGGCCACGCCGCTGGTTGTCGATGGCGTGATGTACGTATCCGCGCCGTGGAGCGTCGTGCATGCCATCAACG TGCGCACCGGCAAGACGCTGTGGACCTACGACCCCAAGGTCCCACGCGACCAGGCCTACAAGGGCTGCTGTGACGTCGTG AACCGTGGCGTGGCGCTCTACAAGGGCAAGGTGTTCGTGGGTTCGTTCGACGGCCGCCTCGTGGCCATCGACGCGGCCAC CGGCAAGAAGGTCTGGGAGCAGGACACCATCGCCGACCGCAGCCATTCCTACACCATCACGGGCGCGCCGCGCGTGTACA AGGGCAAGGTCATCATCGGCAACGGCGGCGCCGAATATGGCGTGCGCGGGTACATCACCGCCTATGACGCCGAAACCGGC AAGCAGCAGTGGCGCTGGTTCACGGTGCCGGGCGATCCGTCTAAGCCGTTCGAGAATGACGCCATGGCAAAGGCCGCGGC TACGTGGGACCCGGCCGGGAAATACTGGGTCAACGGCGGGGGTGGCACGGTGTGGAACACGATGGCGTTCGATCCCGACC TGAACCTGATGTACATCGGCACGGGCAATGCCGGCCCGTGGAGCCGCAAGGCACGCAGCCCCGGCGGTGGCGACAACCTG TACGCGGCTTCGGTGGTTGCGCTCAATCCGGACACGGGCGAATACGTCTGGCACTACCAGGAAACGCCCGGCGACAACTG GGACTACACCTCGACCCAGGACATCATCCTGGCGGACCTGCCAATCGACGGCCAGCCGCGCAAGGTGATCCTGCACGCGC CCAAGAACGGCTTCTTCTTCGTGATCGACCGGACCAACGGCAAGTTCATCTCCGCGAAGAACTTTGTCGACGTGAACTGG GCATCGGGCTATGACAAGAACGGACGCCCGATCGAAACGTCGCAGGCGGATACCTCTGGCAAGCCCGTCGATGTCGTGCC GGGTCCGTTCGGCGCCCACAACTGGCATGCGATGTCGTTCAACCCGCGTCTCGGGCTGGCCTTCATCCCGGCGCAGCATG TGCCGCTGACGCTGGCCGACAACAAGGGATGGGAGCATAACCAGAAGGATTCCCCCGAAGCTCACCGCGGCGTGGGCTGG AACCTCGGCATGCTGGTCAACGCCGAGCCGCCGAAGAGCAAGCCGATGGGCCGCCTGATCGCGTGGGACCCGATTCTGCA GAAGGCGGTCTGGCACCAGGACTACACCGGCCCATGGAATGGCGGCACGCTGACCACCGCGGGGAACCTCGTGTTCCAGG GCACTGCGGACGGACGCTTTATCGCCTATCACGCCCAGACCGGCGAAAAGCTGTGGGAAACACCGACCGGCACCGGCGTG GTGGCGCCGCCTGTGACCTACCTGGTCGATGGCAAGCAGTACGTGTCGGTTGCCGTGGGCTGGGGCGGCGTGTTTGGCCT GAGCGCGCGTGGCACTGACCGGCAGTCGCCGGGCACGGTGTACACCTTCGCTGTCGGGGGCAAGGCCAAGGCGCCGGCAT TCACGCCGTATCCGATGGCCGAGCTGGTGTCAGGCGTCAAATACGACGCGGGCAAGGTGCAGGAAGGGCAGAAGCTCTAC GTCAACAACTGCGTGTTCTGCCATGGCGTGCCGGGCGTGGACAAGGGCGGCAACATTCCCAACCTCGCTTACGTCGGTGC CCCGGTCATCGAGCATCTGGACAAGTTCGTGTTCAACGGGCCGTTCGTGCAAAAGGGCATGCCCGACTTCACGGGCAAGC TGACAGCCGAGGATGTGACCAAGATCCAGGCCTTCATCCTTGGCACCGCGGATGCCGTGCGGCCGAAGAAGCCGTAA
Upstream 100 bases:
>100_bases ACATCTCCGTACGCAACGGCCCCATGGAGAATAATCGCTTCAATGTGCGCTTGCTCAAAGTGTTCTGACCCCACATTCCA ACGACAAAGAGGAGATTTCG
Downstream 100 bases:
>100_bases CCATGTAAAACGCCCGGGACGCTGCGGCGACCCGGGCGATGTGGGCAGGCGCAAGCATCAGGCTCAGGCGCTTTGCTGCT GGCAACTGCATTCGAGCAAT
Product: Pyrrolo-quinoline quinone
Products: NA
Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MNTSQMRSRNRSRRPHGLVLAGIAAAMAMAGVTAQGADGRPATAQKIRASTARVDGAAIRANETATPNWPTYGLDYAETR FSKLDQIHAGNVKDLGLVWSYNLESTRGVEATPLVVDGVMYVSAPWSVVHAINVRTGKTLWTYDPKVPRDQAYKGCCDVV NRGVALYKGKVFVGSFDGRLVAIDAATGKKVWEQDTIADRSHSYTITGAPRVYKGKVIIGNGGAEYGVRGYITAYDAETG KQQWRWFTVPGDPSKPFENDAMAKAAATWDPAGKYWVNGGGGTVWNTMAFDPDLNLMYIGTGNAGPWSRKARSPGGGDNL YAASVVALNPDTGEYVWHYQETPGDNWDYTSTQDIILADLPIDGQPRKVILHAPKNGFFFVIDRTNGKFISAKNFVDVNW ASGYDKNGRPIETSQADTSGKPVDVVPGPFGAHNWHAMSFNPRLGLAFIPAQHVPLTLADNKGWEHNQKDSPEAHRGVGW NLGMLVNAEPPKSKPMGRLIAWDPILQKAVWHQDYTGPWNGGTLTTAGNLVFQGTADGRFIAYHAQTGEKLWETPTGTGV VAPPVTYLVDGKQYVSVAVGWGGVFGLSARGTDRQSPGTVYTFAVGGKAKAPAFTPYPMAELVSGVKYDAGKVQEGQKLY VNNCVFCHGVPGVDKGGNIPNLAYVGAPVIEHLDKFVFNGPFVQKGMPDFTGKLTAEDVTKIQAFILGTADAVRPKKP
Sequences:
>Translated_718_residues MNTSQMRSRNRSRRPHGLVLAGIAAAMAMAGVTAQGADGRPATAQKIRASTARVDGAAIRANETATPNWPTYGLDYAETR FSKLDQIHAGNVKDLGLVWSYNLESTRGVEATPLVVDGVMYVSAPWSVVHAINVRTGKTLWTYDPKVPRDQAYKGCCDVV NRGVALYKGKVFVGSFDGRLVAIDAATGKKVWEQDTIADRSHSYTITGAPRVYKGKVIIGNGGAEYGVRGYITAYDAETG KQQWRWFTVPGDPSKPFENDAMAKAAATWDPAGKYWVNGGGGTVWNTMAFDPDLNLMYIGTGNAGPWSRKARSPGGGDNL YAASVVALNPDTGEYVWHYQETPGDNWDYTSTQDIILADLPIDGQPRKVILHAPKNGFFFVIDRTNGKFISAKNFVDVNW ASGYDKNGRPIETSQADTSGKPVDVVPGPFGAHNWHAMSFNPRLGLAFIPAQHVPLTLADNKGWEHNQKDSPEAHRGVGW NLGMLVNAEPPKSKPMGRLIAWDPILQKAVWHQDYTGPWNGGTLTTAGNLVFQGTADGRFIAYHAQTGEKLWETPTGTGV VAPPVTYLVDGKQYVSVAVGWGGVFGLSARGTDRQSPGTVYTFAVGGKAKAPAFTPYPMAELVSGVKYDAGKVQEGQKLY VNNCVFCHGVPGVDKGGNIPNLAYVGAPVIEHLDKFVFNGPFVQKGMPDFTGKLTAEDVTKIQAFILGTADAVRPKKP >Mature_718_residues MNTSQMRSRNRSRRPHGLVLAGIAAAMAMAGVTAQGADGRPATAQKIRASTARVDGAAIRANETATPNWPTYGLDYAETR FSKLDQIHAGNVKDLGLVWSYNLESTRGVEATPLVVDGVMYVSAPWSVVHAINVRTGKTLWTYDPKVPRDQAYKGCCDVV NRGVALYKGKVFVGSFDGRLVAIDAATGKKVWEQDTIADRSHSYTITGAPRVYKGKVIIGNGGAEYGVRGYITAYDAETG KQQWRWFTVPGDPSKPFENDAMAKAAATWDPAGKYWVNGGGGTVWNTMAFDPDLNLMYIGTGNAGPWSRKARSPGGGDNL YAASVVALNPDTGEYVWHYQETPGDNWDYTSTQDIILADLPIDGQPRKVILHAPKNGFFFVIDRTNGKFISAKNFVDVNW ASGYDKNGRPIETSQADTSGKPVDVVPGPFGAHNWHAMSFNPRLGLAFIPAQHVPLTLADNKGWEHNQKDSPEAHRGVGW NLGMLVNAEPPKSKPMGRLIAWDPILQKAVWHQDYTGPWNGGTLTTAGNLVFQGTADGRFIAYHAQTGEKLWETPTGTGV VAPPVTYLVDGKQYVSVAVGWGGVFGLSARGTDRQSPGTVYTFAVGGKAKAPAFTPYPMAELVSGVKYDAGKVQEGQKLY VNNCVFCHGVPGVDKGGNIPNLAYVGAPVIEHLDKFVFNGPFVQKGMPDFTGKLTAEDVTKIQAFILGTADAVRPKKP
Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=656, Percent_Identity=25.1524390243902, Blast_Score=150, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.98.1 [H]
Molecular weight: Translated: 77514; Mature: 77514
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS00364 BACTERIAL_PQQ_2 ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSQMRSRNRSRRPHGLVLAGIAAAMAMAGVTAQGADGRPATAQKIRASTARVDGAAIR CCHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHCCCCEEEE ANETATPNWPTYGLDYAETRFSKLDQIHAGNVKDLGLVWSYNLESTRGVEATPLVVDGVM ECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEE YVSAPWSVVHAINVRTGKTLWTYDPKVPRDQAYKGCCDVVNRGVALYKGKVFVGSFDGRL EEECCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECEEEEEECCCEE VAIDAATGKKVWEQDTIADRSHSYTITGAPRVYKGKVIIGNGGAEYGVRGYITAYDAETG EEEECCCCCCHHCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEECCCC KQQWRWFTVPGDPSKPFENDAMAKAAATWDPAGKYWVNGGGGTVWNTMAFDPDLNLMYIG CCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCEEEEEEEECCCCCEEEEE TGNAGPWSRKARSPGGGDNLYAASVVALNPDTGEYVWHYQETPGDNWDYTSTQDIILADL CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEC PIDGQPRKVILHAPKNGFFFVIDRTNGKFISAKNFVDVNWASGYDKNGRPIETSQADTSG CCCCCCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECCCCCCCCCCEEECCCCCCCC KPVDVVPGPFGAHNWHAMSFNPRLGLAFIPAQHVPLTLADNKGWEHNQKDSPEAHRGVGW CCEEECCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCC NLGMLVNAEPPKSKPMGRLIAWDPILQKAVWHQDYTGPWNGGTLTTAGNLVFQGTADGRF CEEEEEECCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCEE IAYHAQTGEKLWETPTGTGVVAPPVTYLVDGKQYVSVAVGWGGVFGLSARGTDRQSPGTV EEEECCCCCHHHCCCCCCEEECCCEEEEECCCEEEEEEEECCCEEEECCCCCCCCCCCCE YTFAVGGKAKAPAFTPYPMAELVSGVKYDAGKVQEGQKLYVNNCVFCHGVPGVDKGGNIP EEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCC NLAYVGAPVIEHLDKFVFNGPFVQKGMPDFTGKLTAEDVTKIQAFILGTADAVRPKKP CEEEECCHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCC >Mature Secondary Structure MNTSQMRSRNRSRRPHGLVLAGIAAAMAMAGVTAQGADGRPATAQKIRASTARVDGAAIR CCHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHCCCCEEEE ANETATPNWPTYGLDYAETRFSKLDQIHAGNVKDLGLVWSYNLESTRGVEATPLVVDGVM ECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEE YVSAPWSVVHAINVRTGKTLWTYDPKVPRDQAYKGCCDVVNRGVALYKGKVFVGSFDGRL EEECCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECEEEEEECCCEE VAIDAATGKKVWEQDTIADRSHSYTITGAPRVYKGKVIIGNGGAEYGVRGYITAYDAETG EEEECCCCCCHHCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEECCCC KQQWRWFTVPGDPSKPFENDAMAKAAATWDPAGKYWVNGGGGTVWNTMAFDPDLNLMYIG CCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCEEEEEEEECCCCCEEEEE TGNAGPWSRKARSPGGGDNLYAASVVALNPDTGEYVWHYQETPGDNWDYTSTQDIILADL CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEC PIDGQPRKVILHAPKNGFFFVIDRTNGKFISAKNFVDVNWASGYDKNGRPIETSQADTSG CCCCCCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECCCCCCCCCCEEECCCCCCCC KPVDVVPGPFGAHNWHAMSFNPRLGLAFIPAQHVPLTLADNKGWEHNQKDSPEAHRGVGW CCEEECCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCC NLGMLVNAEPPKSKPMGRLIAWDPILQKAVWHQDYTGPWNGGTLTTAGNLVFQGTADGRF CEEEEEECCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCEE IAYHAQTGEKLWETPTGTGVVAPPVTYLVDGKQYVSVAVGWGGVFGLSARGTDRQSPGTV EEEECCCCCHHHCCCCCCEEECCCEEEEECCCEEEEEEEECCCEEEECCCCCCCCCCCCE YTFAVGGKAKAPAFTPYPMAELVSGVKYDAGKVQEGQKLYVNNCVFCHGVPGVDKGGNIP EEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCC NLAYVGAPVIEHLDKFVFNGPFVQKGMPDFTGKLTAEDVTKIQAFILGTADAVRPKKP CEEEECCHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]