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The map label for this gene is yoaA [H]

Identifier: 73541036

GI number: 73541036

Start: 1441614

End: 1443878

Strand: Direct

Name: yoaA [H]

Synonym: Reut_A1342

Alternate gene names: 73541036

Gene position: 1441614-1443878 (Clockwise)

Preceding gene: 73541035

Following gene: 73541038

Centisome position: 37.87

GC content: 66.45

Gene sequence:

>2265_bases
ATGGCGCGCTATCCCGCTATCCCGCCATCCCGAGCCTTACCAGCCTTGACCACCGTTACCGAGCCGACCGACCTGCCAGA
GCCGAACGCAGATACCGACATCGACGCCGCCGTCTCTGCCGTCGCCGCCGATAACCCGGTCCCGGCGCAGACTGAACTGG
TTCCCGCGTCCGCGGTGCCTGCCGACCACGCCAGCGAACTGGCAAGGATTTTTGCCGACACCGGCACCCTGGCGCAGGGC
ATCCCGGGCTATCGTCCGCGCGCCTCGCAGCAGAAGATGGCCGAAGCCGTTGCAGGAGCGATCGAAGCGAGCGACACGGT
GATCGTCGAAGCCGGGACGGGCACGGGCAAGACCTTTGCCTACCTTGTGCCTGCCATGCTGTGGGGCGGCAAGGTCATCC
TGTCCACGGGAACGAAGAACCTTCAGGACCAGCTCTTCCTGCGCGACATTCCGACCGTGCGGCGCGCGCTGAATGTGCCG
ATCTCGGTATCGCTGCTCAAGGGGCGCGCCAACTACCTGTGCCACTATCACCTCGAGCGCGCGGAGGCCAATGGCCGGCT
CGCGTCCAAGCAGGATGCCGCGTGGCTGCGGGAAATCGCACGCTTTGCCAAGGTCACGTCGTCTGGCGACAAGGCCGAAC
TGGCCGCGGTGCCCGAGAACGCGCCCGTGTGGCAGATGGTGACTTCCACGCGTGACAACTGCCTCGGATCGGAGTGCCCG
AACTACAAGGACTGCTTCGTCATGCGGGCGCGCAAGGAAGCCCAGCAGGCGGACGTGGTCGTGGTGAACCACCACCTGTT
CTTTGCCGATGTCGTGCTGCGCGACAGCGGCATGGCCGAACTGCTGCCCGCGGCGAACACGATCATCTTCGACGAAGCGC
ACCAGTTGCCCGATACGGCGACGCTGTTCTTCGGCGAAACGCTGTCGACGAGCCAGTTGCTCGAAATCTGCCGCGATACC
GTGGCCGAAGGGCTTTCGCACGCGCGCGACGCAGTGGATTGGGTCGGTATCGCGGCGCCGCTAGAGCGTGCCACGCGCGA
TCTGCGCCTGGCATTTGGCAAGGAGAACGCGCGGCTGGCACTGGGACAGATCGAGGCGGACCGGCGCATCGGCGAACCGT
TCTTCGACACGCTCGACGCGCTCGAAGAGGCGCTGTCGACTTTCGTCGAGCATCTCGAAAGCCAGGCCGAACGTGCCGAG
ACGCTGCAGCAATGCCACCGCCGCGCGGTAGAATTGCAACAGCGCCTCGAAGCATGGCGGGACGAAGGCAAGGCCTTTGA
GACACCCGCGCCGCAAGCGCCGGACAGCGGCGGAAACGCCGCGCCGGAAGCCGATGCGCCGCCGCCTCCTGCCGCGCCCG
CGCAGTTCGGGCCGGACACGGTGCGCTGGGTGGAGGTCTTTTCGCATACGGTGCAATTGCATCGCACGCCGCTTTCGATC
GCGCCGATCTTCACGCGCCAGCGCGAAGGCCACCCGCGCGCCTGGGTGTTCACGTCGGCCACGCTGTCGGTAAAGGGCAA
CTTCACGCACTACGCCGCGCAACTTGGGCTCAACAAGGACAACTCGCTGACGCTGCCGAGCCCGTTCGACTACGGCAAGC
AGGGGCTGCTCTACGTGCCGCGCGACATGCCGCCGCCGAACTCACCCCAGTTCACGGACGCCGTGGTGCAGGCGGCGCTG
CCGCTGATCGAGGCTGCCGGCGGCCGCACGTTCCTGCTGTGCACGACCTTGCGGGCCGTACAGCGCGCGTCTGACCTGCT
TTACGACGCCTTTGCCGAGCGTGGCCTGGAATTGCCGCTGCTCGTGCAGGGCCAGGCCAGCCGCACGGAATTGCTCGACC
GCTTCCGCGAACTTGGCAATGCTGTGCTGGTGGGCAGCCAGAGTTTCTGGGAAGGCGTGGATGTGCGCGGCGAGGCGCTG
TCGCTCGTGATCATCGACAAGCTGCCGTTCGCGCCGCCCGATGATCCGGTACTGGCCGCGCGCATGGAGGTGCTGCAGAA
GAAGGGACTCAGCCCGTTCGCGGTCCACCAGTTGCCGCATGCCGTCATCACGCTGAAGCAGGGCGCGGGGCGGCTGATCC
GCTCGGAATCTGATCGTGGCGTGCTGGCCATCTGTGACACACGGCTGGTCGAAAAGCCCTATGGCCGCCAGATCTGGCAA
AGCCTGCCGCCGTTCACGCGCACGCGTGAGGCGCCGACCGTCGTACGCTTCCTGGAGTCCTTGAGGGAAGGGAAGAAAGG
CGAGGCACAGGCGCAGCCGGACTGA

Upstream 100 bases:

>100_bases
ACGCCGCCTCAAGCTGAAGGACGCCATCACCCTGCTGCAACTGCAGCTCGAACCCGACGTGCCGGCCTGAGCGCCGCTGC
GCCGACGTAGTCTGCGCCGC

Downstream 100 bases:

>100_bases
GCGGCTTCGCCGATCCGGTCCGCGATCCGGGCCGGACAACGAGAAACGGGGCAGATCCTTGCGGATCTGCCCCGTTTTGT
ATGAGCCGCGGAATCAGTGC

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 754; Mature: 753

Protein sequence:

>754_residues
MARYPAIPPSRALPALTTVTEPTDLPEPNADTDIDAAVSAVAADNPVPAQTELVPASAVPADHASELARIFADTGTLAQG
IPGYRPRASQQKMAEAVAGAIEASDTVIVEAGTGTGKTFAYLVPAMLWGGKVILSTGTKNLQDQLFLRDIPTVRRALNVP
ISVSLLKGRANYLCHYHLERAEANGRLASKQDAAWLREIARFAKVTSSGDKAELAAVPENAPVWQMVTSTRDNCLGSECP
NYKDCFVMRARKEAQQADVVVVNHHLFFADVVLRDSGMAELLPAANTIIFDEAHQLPDTATLFFGETLSTSQLLEICRDT
VAEGLSHARDAVDWVGIAAPLERATRDLRLAFGKENARLALGQIEADRRIGEPFFDTLDALEEALSTFVEHLESQAERAE
TLQQCHRRAVELQQRLEAWRDEGKAFETPAPQAPDSGGNAAPEADAPPPPAAPAQFGPDTVRWVEVFSHTVQLHRTPLSI
APIFTRQREGHPRAWVFTSATLSVKGNFTHYAAQLGLNKDNSLTLPSPFDYGKQGLLYVPRDMPPPNSPQFTDAVVQAAL
PLIEAAGGRTFLLCTTLRAVQRASDLLYDAFAERGLELPLLVQGQASRTELLDRFRELGNAVLVGSQSFWEGVDVRGEAL
SLVIIDKLPFAPPDDPVLAARMEVLQKKGLSPFAVHQLPHAVITLKQGAGRLIRSESDRGVLAICDTRLVEKPYGRQIWQ
SLPPFTRTREAPTVVRFLESLREGKKGEAQAQPD

Sequences:

>Translated_754_residues
MARYPAIPPSRALPALTTVTEPTDLPEPNADTDIDAAVSAVAADNPVPAQTELVPASAVPADHASELARIFADTGTLAQG
IPGYRPRASQQKMAEAVAGAIEASDTVIVEAGTGTGKTFAYLVPAMLWGGKVILSTGTKNLQDQLFLRDIPTVRRALNVP
ISVSLLKGRANYLCHYHLERAEANGRLASKQDAAWLREIARFAKVTSSGDKAELAAVPENAPVWQMVTSTRDNCLGSECP
NYKDCFVMRARKEAQQADVVVVNHHLFFADVVLRDSGMAELLPAANTIIFDEAHQLPDTATLFFGETLSTSQLLEICRDT
VAEGLSHARDAVDWVGIAAPLERATRDLRLAFGKENARLALGQIEADRRIGEPFFDTLDALEEALSTFVEHLESQAERAE
TLQQCHRRAVELQQRLEAWRDEGKAFETPAPQAPDSGGNAAPEADAPPPPAAPAQFGPDTVRWVEVFSHTVQLHRTPLSI
APIFTRQREGHPRAWVFTSATLSVKGNFTHYAAQLGLNKDNSLTLPSPFDYGKQGLLYVPRDMPPPNSPQFTDAVVQAAL
PLIEAAGGRTFLLCTTLRAVQRASDLLYDAFAERGLELPLLVQGQASRTELLDRFRELGNAVLVGSQSFWEGVDVRGEAL
SLVIIDKLPFAPPDDPVLAARMEVLQKKGLSPFAVHQLPHAVITLKQGAGRLIRSESDRGVLAICDTRLVEKPYGRQIWQ
SLPPFTRTREAPTVVRFLESLREGKKGEAQAQPD
>Mature_753_residues
ARYPAIPPSRALPALTTVTEPTDLPEPNADTDIDAAVSAVAADNPVPAQTELVPASAVPADHASELARIFADTGTLAQGI
PGYRPRASQQKMAEAVAGAIEASDTVIVEAGTGTGKTFAYLVPAMLWGGKVILSTGTKNLQDQLFLRDIPTVRRALNVPI
SVSLLKGRANYLCHYHLERAEANGRLASKQDAAWLREIARFAKVTSSGDKAELAAVPENAPVWQMVTSTRDNCLGSECPN
YKDCFVMRARKEAQQADVVVVNHHLFFADVVLRDSGMAELLPAANTIIFDEAHQLPDTATLFFGETLSTSQLLEICRDTV
AEGLSHARDAVDWVGIAAPLERATRDLRLAFGKENARLALGQIEADRRIGEPFFDTLDALEEALSTFVEHLESQAERAET
LQQCHRRAVELQQRLEAWRDEGKAFETPAPQAPDSGGNAAPEADAPPPPAAPAQFGPDTVRWVEVFSHTVQLHRTPLSIA
PIFTRQREGHPRAWVFTSATLSVKGNFTHYAAQLGLNKDNSLTLPSPFDYGKQGLLYVPRDMPPPNSPQFTDAVVQAALP
LIEAAGGRTFLLCTTLRAVQRASDLLYDAFAERGLELPLLVQGQASRTELLDRFRELGNAVLVGSQSFWEGVDVRGEALS
LVIIDKLPFAPPDDPVLAARMEVLQKKGLSPFAVHQLPHAVITLKQGAGRLIRSESDRGVLAICDTRLVEKPYGRQIWQS
LPPFTRTREAPTVVRFLESLREGKKGEAQAQPD

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=671, Percent_Identity=44.8584202682563, Blast_Score=535, Evalue=1e-153,
Organism=Escherichia coli, GI1787018, Length=241, Percent_Identity=35.6846473029046, Blast_Score=119, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 82070; Mature: 81939

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYPAIPPSRALPALTTVTEPTDLPEPNADTDIDAAVSAVAADNPVPAQTELVPASAVP
CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
ADHASELARIFADTGTLAQGIPGYRPRASQQKMAEAVAGAIEASDTVIVEAGTGTGKTFA
CHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
YLVPAMLWGGKVILSTGTKNLQDQLFLRDIPTVRRALNVPISVSLLKGRANYLCHYHLER
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHH
AEANGRLASKQDAAWLREIARFAKVTSSGDKAELAAVPENAPVWQMVTSTRDNCLGSECP
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCHHHCCCCCCC
NYKDCFVMRARKEAQQADVVVVNHHLFFADVVLRDSGMAELLPAANTIIFDEAHQLPDTA
CHHHHHHHHHHHHHHHCCEEEEECHHEEEHHHHCCCCHHHHHCCCCEEEECCHHCCCCCE
TLFFGETLSTSQLLEICRDTVAEGLSHARDAVDWVGIAAPLERATRDLRLAFGKENARLA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
LGQIEADRRIGEPFFDTLDALEEALSTFVEHLESQAERAETLQQCHRRAVELQQRLEAWR
EEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEGKAFETPAPQAPDSGGNAAPEADAPPPPAAPAQFGPDTVRWVEVFSHTVQLHRTPLSI
HCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
APIFTRQREGHPRAWVFTSATLSVKGNFTHYAAQLGLNKDNSLTLPSPFDYGKQGLLYVP
CHHHHHCCCCCCCEEEEEEEEEEECCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCEECC
RDMPPPNSPQFTDAVVQAALPLIEAAGGRTFLLCTTLRAVQRASDLLYDAFAERGLELPL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LVQGQASRTELLDRFRELGNAVLVGSQSFWEGVDVRGEALSLVIIDKLPFAPPDDPVLAA
EECCCCHHHHHHHHHHHHCCEEEECCHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHH
RMEVLQKKGLSPFAVHQLPHAVITLKQGAGRLIRSESDRGVLAICDTRLVEKPYGRQIWQ
HHHHHHHCCCCCHHHHHCCHHEEEEECCCCHHHCCCCCCCEEEEECCHHHCCCCHHHHHH
SLPPFTRTREAPTVVRFLESLREGKKGEAQAQPD
HCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ARYPAIPPSRALPALTTVTEPTDLPEPNADTDIDAAVSAVAADNPVPAQTELVPASAVP
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
ADHASELARIFADTGTLAQGIPGYRPRASQQKMAEAVAGAIEASDTVIVEAGTGTGKTFA
CHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
YLVPAMLWGGKVILSTGTKNLQDQLFLRDIPTVRRALNVPISVSLLKGRANYLCHYHLER
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHH
AEANGRLASKQDAAWLREIARFAKVTSSGDKAELAAVPENAPVWQMVTSTRDNCLGSECP
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCHHHCCCCCCC
NYKDCFVMRARKEAQQADVVVVNHHLFFADVVLRDSGMAELLPAANTIIFDEAHQLPDTA
CHHHHHHHHHHHHHHHCCEEEEECHHEEEHHHHCCCCHHHHHCCCCEEEECCHHCCCCCE
TLFFGETLSTSQLLEICRDTVAEGLSHARDAVDWVGIAAPLERATRDLRLAFGKENARLA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
LGQIEADRRIGEPFFDTLDALEEALSTFVEHLESQAERAETLQQCHRRAVELQQRLEAWR
EEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEGKAFETPAPQAPDSGGNAAPEADAPPPPAAPAQFGPDTVRWVEVFSHTVQLHRTPLSI
HCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
APIFTRQREGHPRAWVFTSATLSVKGNFTHYAAQLGLNKDNSLTLPSPFDYGKQGLLYVP
CHHHHHCCCCCCCEEEEEEEEEEECCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCEECC
RDMPPPNSPQFTDAVVQAALPLIEAAGGRTFLLCTTLRAVQRASDLLYDAFAERGLELPL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LVQGQASRTELLDRFRELGNAVLVGSQSFWEGVDVRGEALSLVIIDKLPFAPPDDPVLAA
EECCCCHHHHHHHHHHHHCCEEEECCHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHH
RMEVLQKKGLSPFAVHQLPHAVITLKQGAGRLIRSESDRGVLAICDTRLVEKPYGRQIWQ
HHHHHHHCCCCCHHHHHCCHHEEEEECCCCHHHCCCCCCCEEEEECCHHHCCCCHHHHHH
SLPPFTRTREAPTVVRFLESLREGKKGEAQAQPD
HCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]