Click here to switch to the map view.

The map label for this gene is rfaG [C]

Identifier: 73540446

GI number: 73540446

Start: 801872

End: 803032

Strand: Reverse

Name: rfaG [C]

Synonym: Reut_A0742

Alternate gene names: 73540446

Gene position: 803032-801872 (Counterclockwise)

Preceding gene: 73540447

Following gene: 73540445

Centisome position: 21.1

GC content: 65.89

Gene sequence:

>1161_bases
ATGCCCGCGCAGCGGCCCATGCGGATCCTGCTGCTTTGTACCGGCCTCAAGATGGGTGGCGCGGAACAGCAGATTGCCGC
GCTTGCACGGCAATTCCTGCGTGACGGGCATGCGGTGGCCGTTGTGAGCCTGACGGCGGAGCAAGAGGTATCGTTGCCGG
AGGGCGCCACGGTGCTGCACCTCGGCATGCGCAAGACCTTGCCGTCGTTTGCGATGGCGCTCTGGCGGCTGAATCGGTTT
GTACGGCAGTGGCGGCCCGATGTCATCCACGCCCATATGGTCCACGCCAATCTTGCTGCGCGGGTCCTCGCCGCACTGAC
CGACGGGCCGCCCGTGCTTTGCTCGGCGCACAGCGCGCGCGAAGGCGGACAGGCACGCATGCTCGCCTATCGCCTGACCG
ACCGGTGGGCGTCGCTGACCACGCACGTCAGCGAGGCAGGACGACTGGCCATGATTGCCGCCGGCGCCGTCGCTCCGGAA
CGCATCCGCGTTGTGCCCAACGGCATCGACACCGCTCTTTTCCGTCCAGATCCGGCACGGCGGCAGTCGACACGCGCAGC
GTTGGGCGTGGACGCAGACACGCGAGTCATCATCAACGTGGGCCGGCTGGTGCCCGAGAAGGCCCAGCACGTTCTGATCG
AAGCCTTTGCGCGATTGGTGCGCCAAGCAGATTCCGCAACGCCATCGGGAGCCATGCGCTTGTTCATCGTAGGAGCGGGT
CAGGTACGAAGCACGCTCGAGGCGACCATCGACCGCCTCGGCGTGCAGAGTGTCGTCACATTGCTGGGCATGCGCAACGA
CGTACCGGCGTTGCTGAATGCCGCCGACGTGTTCGCCTTGTCGTCCGATATTGAAGGCATGCCGCTTGTGATTGGCGAAG
CGTTGGCCAGCGGCTGTGCCGTGGTGGCCACAGATGCGGCAGGCGTAGCGGAACTGCTCGGCGATGCCGGGAAGATCGTG
CCTTGCGGTAGCGTAGAGGCATTGGCTGACGCCCTCGACCGGGCCATGGCGTGCGGCGTCGGCATGTCAGGGGAACAGAT
GGCCCGACGTCAGCGCATTGTGGACAAGTTCAGCCTCGAAGCCGTCGCCCGGCAATGGATTGGTTGCTACGCCGCGCTGA
CCGGTGTGGCAGGCAACGGCATACCGGAGCCTGCCCGATGA

Upstream 100 bases:

>100_bases
AGCATTGCTCGTTTGCGCTGGACCTGCTGATTGCCCTGAAGACGATGCAGACGATCCTGACCGGGTACGGTGCCCGGTGA
CGGTGCAAGCATCGACCGGC

Downstream 100 bases:

>100_bases
GACGGCAAGTTGCGAGCAACCTCGCATGGATGCTGACGGAGCGCGGTCTGCAGGTCGCAGGCGGCATCGGCATCGTCGCC
ATGCTGGCACGGGGGTTGGG

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MPAQRPMRILLLCTGLKMGGAEQQIAALARQFLRDGHAVAVVSLTAEQEVSLPEGATVLHLGMRKTLPSFAMALWRLNRF
VRQWRPDVIHAHMVHANLAARVLAALTDGPPVLCSAHSAREGGQARMLAYRLTDRWASLTTHVSEAGRLAMIAAGAVAPE
RIRVVPNGIDTALFRPDPARRQSTRAALGVDADTRVIINVGRLVPEKAQHVLIEAFARLVRQADSATPSGAMRLFIVGAG
QVRSTLEATIDRLGVQSVVTLLGMRNDVPALLNAADVFALSSDIEGMPLVIGEALASGCAVVATDAAGVAELLGDAGKIV
PCGSVEALADALDRAMACGVGMSGEQMARRQRIVDKFSLEAVARQWIGCYAALTGVAGNGIPEPAR

Sequences:

>Translated_386_residues
MPAQRPMRILLLCTGLKMGGAEQQIAALARQFLRDGHAVAVVSLTAEQEVSLPEGATVLHLGMRKTLPSFAMALWRLNRF
VRQWRPDVIHAHMVHANLAARVLAALTDGPPVLCSAHSAREGGQARMLAYRLTDRWASLTTHVSEAGRLAMIAAGAVAPE
RIRVVPNGIDTALFRPDPARRQSTRAALGVDADTRVIINVGRLVPEKAQHVLIEAFARLVRQADSATPSGAMRLFIVGAG
QVRSTLEATIDRLGVQSVVTLLGMRNDVPALLNAADVFALSSDIEGMPLVIGEALASGCAVVATDAAGVAELLGDAGKIV
PCGSVEALADALDRAMACGVGMSGEQMARRQRIVDKFSLEAVARQWIGCYAALTGVAGNGIPEPAR
>Mature_385_residues
PAQRPMRILLLCTGLKMGGAEQQIAALARQFLRDGHAVAVVSLTAEQEVSLPEGATVLHLGMRKTLPSFAMALWRLNRFV
RQWRPDVIHAHMVHANLAARVLAALTDGPPVLCSAHSAREGGQARMLAYRLTDRWASLTTHVSEAGRLAMIAAGAVAPER
IRVVPNGIDTALFRPDPARRQSTRAALGVDADTRVIINVGRLVPEKAQHVLIEAFARLVRQADSATPSGAMRLFIVGAGQ
VRSTLEATIDRLGVQSVVTLLGMRNDVPALLNAADVFALSSDIEGMPLVIGEALASGCAVVATDAAGVAELLGDAGKIVP
CGSVEALADALDRAMACGVGMSGEQMARRQRIVDKFSLEAVARQWIGCYAALTGVAGNGIPEPAR

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=379, Percent_Identity=26.3852242744063, Blast_Score=83, Evalue=4e-16,
Organism=Escherichia coli, GI1790061, Length=242, Percent_Identity=28.5123966942149, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788357, Length=216, Percent_Identity=31.9444444444444, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17532709, Length=338, Percent_Identity=27.810650887574, Blast_Score=84, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40796; Mature: 40665

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQRPMRILLLCTGLKMGGAEQQIAALARQFLRDGHAVAVVSLTAEQEVSLPEGATVLH
CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEE
LGMRKTLPSFAMALWRLNRFVRQWRPDVIHAHMVHANLAARVLAALTDGPPVLCSAHSAR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
EGGQARMLAYRLTDRWASLTTHVSEAGRLAMIAAGAVAPERIRVVPNGIDTALFRPDPAR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCHHH
RQSTRAALGVDADTRVIINVGRLVPEKAQHVLIEAFARLVRQADSATPSGAMRLFIVGAG
HHHHHHHCCCCCCCEEEEEECHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECH
QVRSTLEATIDRLGVQSVVTLLGMRNDVPALLNAADVFALSSDIEGMPLVIGEALASGCA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCE
VVATDAAGVAELLGDAGKIVPCGSVEALADALDRAMACGVGMSGEQMARRQRIVDKFSLE
EEEECHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AVARQWIGCYAALTGVAGNGIPEPAR
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PAQRPMRILLLCTGLKMGGAEQQIAALARQFLRDGHAVAVVSLTAEQEVSLPEGATVLH
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEE
LGMRKTLPSFAMALWRLNRFVRQWRPDVIHAHMVHANLAARVLAALTDGPPVLCSAHSAR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
EGGQARMLAYRLTDRWASLTTHVSEAGRLAMIAAGAVAPERIRVVPNGIDTALFRPDPAR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCHHH
RQSTRAALGVDADTRVIINVGRLVPEKAQHVLIEAFARLVRQADSATPSGAMRLFIVGAG
HHHHHHHCCCCCCCEEEEEECHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECH
QVRSTLEATIDRLGVQSVVTLLGMRNDVPALLNAADVFALSSDIEGMPLVIGEALASGCA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCE
VVATDAAGVAELLGDAGKIVPCGSVEALADALDRAMACGVGMSGEQMARRQRIVDKFSLE
EEEECHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AVARQWIGCYAALTGVAGNGIPEPAR
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]