| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73540445
Identifier: 73540445
GI number: 73540445
Start: 800616
End: 801875
Strand: Reverse
Name: 73540445
Synonym: Reut_A0741
Alternate gene names: NA
Gene position: 801875-800616 (Counterclockwise)
Preceding gene: 73540446
Following gene: 73540444
Centisome position: 21.07
GC content: 61.11
Gene sequence:
>1260_bases ATGAGACGGCAAGTTGCGAGCAACCTCGCATGGATGCTGACGGAGCGCGGTCTGCAGGTCGCAGGCGGCATCGGCATCGT CGCCATGCTGGCACGGGGGTTGGGGCCGGAGGGATTTGCGCATTTTCAGTATGCGCAGGCGGTGGTGTATATCGCGGCGT CGGTGGCGTTGATTTGCGGTGGTGAGGTAGTGATTCCACGGCTGGTGGCGAATACGGATCCGGCCGCACAGCATCGGTTG GTGGTGCATGCCTTTGGGTTGCGGTTTGGGGCGGGCGTGCTGGCGTATCTGATGATTGGCGCCTTCATGCTCGTGACCCA ACAAGGACCGGAGACATGGATCCCGGCCTTGATACTCGGTATCGCCGTCCTGCTGCGCGAGCCTTCCGGCATCGTGACGG CATGGATGCAGTCCCATACGCGCACGCGGCCAAACGCGGTCATCAATATTTCTTCACTGATCGTCAAGGCTGCTGCTGTC GGGCTGTTGTTCTGGCTCGGCAACGAGAGTGTGCCGGCCTACGCGGCGGCGATTTCGATCGAACCCATTTTTGCAGCATT GCTGTTGGCGCAGTTTTATCTGTCCCGCGCACCCAAGGCGCGTGTCAGCGCGGATGCCGGCCTGGCAAGGGAGCTGTTCA GCAACGGCACGCTGTTCTGGGTCAGTTTCATGCTGATGATGGGCTCACGCCGCGTGGACCAGCTACTGCTCAAGCCCTTC GTTTCGTTGTCCGAATTCGGCGCCTACGCGGCGACGATGCAGATATTGGATAACTTCGTGACCGTGGCCAGCATCCTGGC CGCGGGCATCGCGCCAATCTATGTGTATGCGCAGCCGACGTTGGCCCAGGTCCGTCGCAACATCGCGCGAATTGTAGGGG GCATGGTAGTGGTTGGCGTCACGGGTGGATTCGTGATCGCCATATCCGCGCACTGGATCATCCAACTGCTCTACGGCTCG GCGTTTGCCTCTGCCGCGGAGTTGTTGCAGCTTGCAGCCATGGTCTCCGCGCTCGTGTTCGCGGACGTGGGCCTTACGCT GCTACCCGTCTATATGCGCCGGCCGCAGTTGGTCGCCATCAAGTGGGGCATTGTGTTCGCTACCACCATCGTTGTGGATA GCATCGCGATCCCGCATTTGGGAGCGCGCGGGGCGATTCTCGGATATGCGGTGGCAAATCTGCTCGCTATTGCCTTCGGT ATCGCGATCTGGCTACGTCAGACACAAGGGACACCTGCGCCGCACGGGGCAAAGGCATGA
Upstream 100 bases:
>100_bases TTGTGGACAAGTTCAGCCTCGAAGCCGTCGCCCGGCAATGGATTGGTTGCTACGCCGCGCTGACCGGTGTGGCAGGCAAC GGCATACCGGAGCCTGCCCG
Downstream 100 bases:
>100_bases GCAAAGGTCGTCATGTCTGCTTTCTGACCGGGACGCTGAATGCGATGGCTGGGGCTGAACGGATGACTGCGGTCATTGCT AACGCGCTGGCCGAATCCGG
Product: putative lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: Lipopolysaccharide Biosynthesis Protein; O-Antigen Export Protein; Oligosaccharide Translocase; O Antigen Flippase; Lipopolysaccharide/O-Antigen Transporter
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MRRQVASNLAWMLTERGLQVAGGIGIVAMLARGLGPEGFAHFQYAQAVVYIAASVALICGGEVVIPRLVANTDPAAQHRL VVHAFGLRFGAGVLAYLMIGAFMLVTQQGPETWIPALILGIAVLLREPSGIVTAWMQSHTRTRPNAVINISSLIVKAAAV GLLFWLGNESVPAYAAAISIEPIFAALLLAQFYLSRAPKARVSADAGLARELFSNGTLFWVSFMLMMGSRRVDQLLLKPF VSLSEFGAYAATMQILDNFVTVASILAAGIAPIYVYAQPTLAQVRRNIARIVGGMVVVGVTGGFVIAISAHWIIQLLYGS AFASAAELLQLAAMVSALVFADVGLTLLPVYMRRPQLVAIKWGIVFATTIVVDSIAIPHLGARGAILGYAVANLLAIAFG IAIWLRQTQGTPAPHGAKA
Sequences:
>Translated_419_residues MRRQVASNLAWMLTERGLQVAGGIGIVAMLARGLGPEGFAHFQYAQAVVYIAASVALICGGEVVIPRLVANTDPAAQHRL VVHAFGLRFGAGVLAYLMIGAFMLVTQQGPETWIPALILGIAVLLREPSGIVTAWMQSHTRTRPNAVINISSLIVKAAAV GLLFWLGNESVPAYAAAISIEPIFAALLLAQFYLSRAPKARVSADAGLARELFSNGTLFWVSFMLMMGSRRVDQLLLKPF VSLSEFGAYAATMQILDNFVTVASILAAGIAPIYVYAQPTLAQVRRNIARIVGGMVVVGVTGGFVIAISAHWIIQLLYGS AFASAAELLQLAAMVSALVFADVGLTLLPVYMRRPQLVAIKWGIVFATTIVVDSIAIPHLGARGAILGYAVANLLAIAFG IAIWLRQTQGTPAPHGAKA >Mature_419_residues MRRQVASNLAWMLTERGLQVAGGIGIVAMLARGLGPEGFAHFQYAQAVVYIAASVALICGGEVVIPRLVANTDPAAQHRL VVHAFGLRFGAGVLAYLMIGAFMLVTQQGPETWIPALILGIAVLLREPSGIVTAWMQSHTRTRPNAVINISSLIVKAAAV GLLFWLGNESVPAYAAAISIEPIFAALLLAQFYLSRAPKARVSADAGLARELFSNGTLFWVSFMLMMGSRRVDQLLLKPF VSLSEFGAYAATMQILDNFVTVASILAAGIAPIYVYAQPTLAQVRRNIARIVGGMVVVGVTGGFVIAISAHWIIQLLYGS AFASAAELLQLAAMVSALVFADVGLTLLPVYMRRPQLVAIKWGIVFATTIVVDSIAIPHLGARGAILGYAVANLLAIAFG IAIWLRQTQGTPAPHGAKA
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44424; Mature: 44424
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQVASNLAWMLTERGLQVAGGIGIVAMLARGLGPEGFAHFQYAQAVVYIAASVALICG CCCHHHHHHHHHHHHCCCHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC GEVVIPRLVANTDPAAQHRLVVHAFGLRFGAGVLAYLMIGAFMLVTQQGPETWIPALILG CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IAVLLREPSGIVTAWMQSHTRTRPNAVINISSLIVKAAAVGLLFWLGNESVPAYAAAISI HHHHHCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCCHHHHHEEH EPIFAALLLAQFYLSRAPKARVSADAGLARELFSNGTLFWVSFMLMMGSRRVDQLLLKPF HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHH VSLSEFGAYAATMQILDNFVTVASILAAGIAPIYVYAQPTLAQVRRNIARIVGGMVVVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEE TGGFVIAISAHWIIQLLYGSAFASAAELLQLAAMVSALVFADVGLTLLPVYMRRPQLVAI CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE KWGIVFATTIVVDSIAIPHLGARGAILGYAVANLLAIAFGIAIWLRQTQGTPAPHGAKA EHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRRQVASNLAWMLTERGLQVAGGIGIVAMLARGLGPEGFAHFQYAQAVVYIAASVALICG CCCHHHHHHHHHHHHCCCHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC GEVVIPRLVANTDPAAQHRLVVHAFGLRFGAGVLAYLMIGAFMLVTQQGPETWIPALILG CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IAVLLREPSGIVTAWMQSHTRTRPNAVINISSLIVKAAAVGLLFWLGNESVPAYAAAISI HHHHHCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCCHHHHHEEH EPIFAALLLAQFYLSRAPKARVSADAGLARELFSNGTLFWVSFMLMMGSRRVDQLLLKPF HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHH VSLSEFGAYAATMQILDNFVTVASILAAGIAPIYVYAQPTLAQVRRNIARIVGGMVVVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEE TGGFVIAISAHWIIQLLYGSAFASAAELLQLAAMVSALVFADVGLTLLPVYMRRPQLVAI CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE KWGIVFATTIVVDSIAIPHLGARGAILGYAVANLLAIAFGIAIWLRQTQGTPAPHGAKA EHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA