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The map label for this gene is yqgF [C]

Identifier: 73540412

GI number: 73540412

Start: 766432

End: 766857

Strand: Direct

Name: yqgF [C]

Synonym: Reut_A0706

Alternate gene names: 73540412

Gene position: 766432-766857 (Clockwise)

Preceding gene: 73540411

Following gene: 73540413

Centisome position: 20.13

GC content: 65.96

Gene sequence:

>426_bases
ATGCCTGACGGCGTGGGGCGCGAACTGCCCCGCGATGGCACGGTCTTGGCATTCGACTACGGCGAGAAGAAGATCGGCGT
TGCACTCGGCAACTTCGTCACGCGTCACGCGACCGCCCTGACTATCCTTCCGAACGTGTCGGTCGAAGGCCGCTTCCAGG
CCGTCGGCGAGTTGATCCGCGAGTGGACGCCCGTGCAGCTCGTAGTGGGCATGCCGGTCAACCCGGAAGGCGGCGAGCAG
CCCTCCATGCGGCTCGCACGCCGCTTCGGCAATCAGCTCAACGGACGCTATAGCCTGCCCGTCGAGTGGGTGGACGAACG
CTATTCCTCGCGTATGGCCGCCATGGGCGGCGCCCGCCGCGGCGAGCTCGATGCCGAGGCCGCACGCATCATCCTGCAAC
AGTATTTCGACCAGCTTCCGCTATGA

Upstream 100 bases:

>100_bases
GACCCCGAAATCATCTTCAGCGTGCCACCCGAAGAGCGCTTCTCGGCGGCTATCCGCCTGCTGGGCATCGATATCACCAT
GCTTTCCGGCGAGGCCGGGC

Downstream 100 bases:

>100_bases
CCCGACACACCAATCCCGACGCCGAGGCGCTTTACCGCGCCTTGCTCGACAAGGCTCAGGCGCTGATTCCGCAAGCCGAG
CGTGCGCAGTGGTCCGTGGC

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPDGVGRELPRDGTVLAFDYGEKKIGVALGNFVTRHATALTILPNVSVEGRFQAVGELIREWTPVQLVVGMPVNPEGGEQ
PSMRLARRFGNQLNGRYSLPVEWVDERYSSRMAAMGGARRGELDAEAARIILQQYFDQLPL

Sequences:

>Translated_141_residues
MPDGVGRELPRDGTVLAFDYGEKKIGVALGNFVTRHATALTILPNVSVEGRFQAVGELIREWTPVQLVVGMPVNPEGGEQ
PSMRLARRFGNQLNGRYSLPVEWVDERYSSRMAAMGGARRGELDAEAARIILQQYFDQLPL
>Mature_140_residues
PDGVGRELPRDGTVLAFDYGEKKIGVALGNFVTRHATALTILPNVSVEGRFQAVGELIREWTPVQLVVGMPVNPEGGEQP
SMRLARRFGNQLNGRYSLPVEWVDERYSSRMAAMGGARRGELDAEAARIILQQYFDQLPL

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

Organism=Escherichia coli, GI1789318, Length=134, Percent_Identity=38.8059701492537, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_CUPPJ (Q474U5)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_294932.1
- ProteinModelPortal:   Q474U5
- SMR:   Q474U5
- GeneID:   3609289
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A0706
- NMPDR:   fig|264198.3.peg.1195
- HOGENOM:   HBG607919
- OMA:   WQPDALV
- ProtClustDB:   PRK00109
- BioCyc:   REUT264198:REUT_A0706-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 15613; Mature: 15482

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGVGRELPRDGTVLAFDYGEKKIGVALGNFVTRHATALTILPNVSVEGRFQAVGELIR
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHH
EWTPVQLVVGMPVNPEGGEQPSMRLARRFGNQLNGRYSLPVEWVDERYSSRMAAMGGARR
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCC
GELDAEAARIILQQYFDQLPL
CCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDGVGRELPRDGTVLAFDYGEKKIGVALGNFVTRHATALTILPNVSVEGRFQAVGELIR
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHH
EWTPVQLVVGMPVNPEGGEQPSMRLARRFGNQLNGRYSLPVEWVDERYSSRMAAMGGARR
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCC
GELDAEAARIILQQYFDQLPL
CCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA