Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 73540375

GI number: 73540375

Start: 717515

End: 718405

Strand: Reverse

Name: scpA [H]

Synonym: Reut_A0669

Alternate gene names: 73540375

Gene position: 718405-717515 (Counterclockwise)

Preceding gene: 73540376

Following gene: 73540374

Centisome position: 18.87

GC content: 63.3

Gene sequence:

>891_bases
ATGAACCAGAGCGATCAGGACAAGCTGCTTGCCGTGGAACTGCCCGCTGCGCCGCAGGCCGCATCGGCCGGCGAGGACGG
CCCCACCGACGTGGTCGACGGCATGGCGTTCGCACGCCTGTATGGCGAGCCGCTGTTCAAGCTGCCGCAGGACCTGTACA
TCCCGCCCGATGCGCTCGAGATCTTCCTCGAAGCGTTCGAAGGCCCGCTGGACCTGCTGCTGTACCTGATCCGCAAGCAG
AACTTCAACGTCCTCGACATTCCGATGTCGCAGGTCACGCGGCAGTACCTGTCGTACATCGAGCAGATCCGCAAGACCAA
TCTGGAATTGGCGGCGGAATACCTGCTGATGGCGGCGATGCTCATCGAGATCAAGTCGCGCATGCTGCTGCCGGTCAAGA
AGGCCGACAGCGACGAGGATGCCGAAGATCCGCGCGCCGAGCTGGTGCGCCGCCTGCTTGAATACGAACAGATGAAGCTG
GCCGCGCAGCGCCTGGATACCGTGCCGCAGCTCGGCCGCGATTTTCTGCGCTCGCAGGTCTATATCGAACAGAGCCTGGC
GCCGCGCTTCCCGGACGTGGAAGCGGTCGACCTCCAGTCGGCCTGGGCCGACGTGCTCAAGCGCGCCAAGCTCAACCAGC
ACCACAAGATCTCGCGTGAAGAACTCTCGGTGCGCGAGCACATGAGCCAGATCCTGCGCCGGCTGCAGCACGCGCGCTTC
ATGGAATTCACCGAGCTGTTCGATGACGCGATCCGTTCCGGCAAGGGCGTGCCCATCGTGGTGGTGAACTTCATCGCCAT
GCTGGAGCTGTCGCGCGAGTCGCTCGTGGAGATCACGCAGGCCGAGCCGTTCGCGCCAATTTATGTTCGATTGGCGTACA
CCCCTACCTGA

Upstream 100 bases:

>100_bases
GAACGGTCCCGCGCCCAGGCTTCCCGTGTGGCGCAAAAGCCCTACGTGTATTCGCTGGACAACTGATCGCGCCTGACGTG
CCGTATAGCGCACGCCACTC

Downstream 100 bases:

>100_bases
CCTCCCCGTCGCGCCGCGCCCACCGCGGTGCCACATGTTCTACAATCCGCCGACAACCGCGAAGAGCCCGGACAGGGTCC
GCCGAGACTTGTCGATGCGC

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNQSDQDKLLAVELPAAPQAASAGEDGPTDVVDGMAFARLYGEPLFKLPQDLYIPPDALEIFLEAFEGPLDLLLYLIRKQ
NFNVLDIPMSQVTRQYLSYIEQIRKTNLELAAEYLLMAAMLIEIKSRMLLPVKKADSDEDAEDPRAELVRRLLEYEQMKL
AAQRLDTVPQLGRDFLRSQVYIEQSLAPRFPDVEAVDLQSAWADVLKRAKLNQHHKISREELSVREHMSQILRRLQHARF
MEFTELFDDAIRSGKGVPIVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTPT

Sequences:

>Translated_296_residues
MNQSDQDKLLAVELPAAPQAASAGEDGPTDVVDGMAFARLYGEPLFKLPQDLYIPPDALEIFLEAFEGPLDLLLYLIRKQ
NFNVLDIPMSQVTRQYLSYIEQIRKTNLELAAEYLLMAAMLIEIKSRMLLPVKKADSDEDAEDPRAELVRRLLEYEQMKL
AAQRLDTVPQLGRDFLRSQVYIEQSLAPRFPDVEAVDLQSAWADVLKRAKLNQHHKISREELSVREHMSQILRRLQHARF
MEFTELFDDAIRSGKGVPIVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTPT
>Mature_296_residues
MNQSDQDKLLAVELPAAPQAASAGEDGPTDVVDGMAFARLYGEPLFKLPQDLYIPPDALEIFLEAFEGPLDLLLYLIRKQ
NFNVLDIPMSQVTRQYLSYIEQIRKTNLELAAEYLLMAAMLIEIKSRMLLPVKKADSDEDAEDPRAELVRRLLEYEQMKL
AAQRLDTVPQLGRDFLRSQVYIEQSLAPRFPDVEAVDLQSAWADVLKRAKLNQHHKISREELSVREHMSQILRRLQHARF
MEFTELFDDAIRSGKGVPIVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTPT

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 33830; Mature: 33830

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSDQDKLLAVELPAAPQAASAGEDGPTDVVDGMAFARLYGEPLFKLPQDLYIPPDALE
CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHH
IFLEAFEGPLDLLLYLIRKQNFNVLDIPMSQVTRQYLSYIEQIRKTNLELAAEYLLMAAM
HHHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIEIKSRMLLPVKKADSDEDAEDPRAELVRRLLEYEQMKLAAQRLDTVPQLGRDFLRSQV
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIEQSLAPRFPDVEAVDLQSAWADVLKRAKLNQHHKISREELSVREHMSQILRRLQHARF
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MEFTELFDDAIRSGKGVPIVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTPT
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MNQSDQDKLLAVELPAAPQAASAGEDGPTDVVDGMAFARLYGEPLFKLPQDLYIPPDALE
CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHH
IFLEAFEGPLDLLLYLIRKQNFNVLDIPMSQVTRQYLSYIEQIRKTNLELAAEYLLMAAM
HHHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIEIKSRMLLPVKKADSDEDAEDPRAELVRRLLEYEQMKLAAQRLDTVPQLGRDFLRSQV
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIEQSLAPRFPDVEAVDLQSAWADVLKRAKLNQHHKISREELSVREHMSQILRRLQHARF
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MEFTELFDDAIRSGKGVPIVVVNFIAMLELSRESLVEITQAEPFAPIYVRLAYTPT
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]