| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yfeH [H]
Identifier: 73540291
GI number: 73540291
Start: 636858
End: 637883
Strand: Reverse
Name: yfeH [H]
Synonym: Reut_A0585
Alternate gene names: 73540291
Gene position: 637883-636858 (Counterclockwise)
Preceding gene: 73540293
Following gene: 73540288
Centisome position: 16.76
GC content: 63.26
Gene sequence:
>1026_bases ATGTCCAGCATGTTTACCAAGCTCAAGAAACTCTACGACCTGATCGACGGCTTCGTCCTGATCATGCTGACCGCCATCGG CATCGCGTTGCTCGCCCCTGAGTTCGGCAGCAGCCGCGGTCCGCTGCATCTCGGCACCATCACCAGCCTCGGCGTGGCGC TCGTGTTTTTCTTGCATGGCGCAGCGTTGTCGCGCGACAAGCTCGTGTCCGGGGCCAGGCACTGGCGCCTGCATGTATTC GTGCAGGTCTTCACGTACGTCGTGTTCCCGGTGGTGGGCTTGCTGCTGATGCTGTCGCTTCGCAACACACTGCCGGCGGA CCTGCTGCTGGGCGTGTTCTACCTGTGCGCGCTGCCGTCGACCGTTTCATCGTCAGTCGCCATGACGTCGATGGCACGCG GCAACGTGCCGGGCGCCATCTTCAACGCCACCATCTCGGGCCTGATCGGCATGGCCGTCACGCCGCTGCTGATGGGTCTG GTCATCAGCGCGAGCGGCGCTTCCATGCCGCTCGGCAAGGCGCTCATGGGCGTGGCGCTGCAACTGCTGCTGCCGTTCGC GCTGGGCCAGTTGCTGCGCCCGCTGATCGGTAGCTGGCTGGCGAAGAAAAAGCACATCACCAACAAGATCGACCGCGGCG TGATCGTGCTGATCGTCTACTCGTCGTTCTGCGACGCGACCGCCGAAGGCCTGTGGCACCACTACCAGTGGCAGACCATT GCCGCAGTGATGGCGCTGGCCGCCGTGCTGCTGTTTGTCGTGCTTGGCACGACCACCTTTGTCGCGCGCCGGCTGCATTT CAGCGTCGAAGACGAAATTACCGCAGTCTTCTGCGGCTCCAAGAAGAGCCTGGCCAACGGCATCCCGATGGCCAACATTC TGTTCGCCGGGCATCCCGCGCTGGGGCTGTTGGTGTTGCCGCTGATGGTCTATCACCAGTTGCAGCTGATTGTGTGTTCG GTGATTGCGGCACGGTATGCGAATCGTGATGCGCTGGTGGAGGATCGGGCTGCGGCGCGGGCCTGA
Upstream 100 bases:
>100_bases GACGGAGTGTGTAATTCATGCAACGACGAGATAAATGAATGCGATAAATGAATTTGCATTCTAGACCCGGGTAGCGTCCA ATACTAGGCTAAACCCTTAG
Downstream 100 bases:
>100_bases AACCTGGCATTCGCATAAAAAACGGGGGACATGTCCCCCGTTTTTATTTTCCTCGCCTCGCCCCCATCAAACCGACGGAT TTTTCGACAACGGTGGATTC
Product: lipoprotein transmembrane
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSSMFTKLKKLYDLIDGFVLIMLTAIGIALLAPEFGSSRGPLHLGTITSLGVALVFFLHGAALSRDKLVSGARHWRLHVF VQVFTYVVFPVVGLLLMLSLRNTLPADLLLGVFYLCALPSTVSSSVAMTSMARGNVPGAIFNATISGLIGMAVTPLLMGL VISASGASMPLGKALMGVALQLLLPFALGQLLRPLIGSWLAKKKHITNKIDRGVIVLIVYSSFCDATAEGLWHHYQWQTI AAVMALAAVLLFVVLGTTTFVARRLHFSVEDEITAVFCGSKKSLANGIPMANILFAGHPALGLLVLPLMVYHQLQLIVCS VIAARYANRDALVEDRAAARA
Sequences:
>Translated_341_residues MSSMFTKLKKLYDLIDGFVLIMLTAIGIALLAPEFGSSRGPLHLGTITSLGVALVFFLHGAALSRDKLVSGARHWRLHVF VQVFTYVVFPVVGLLLMLSLRNTLPADLLLGVFYLCALPSTVSSSVAMTSMARGNVPGAIFNATISGLIGMAVTPLLMGL VISASGASMPLGKALMGVALQLLLPFALGQLLRPLIGSWLAKKKHITNKIDRGVIVLIVYSSFCDATAEGLWHHYQWQTI AAVMALAAVLLFVVLGTTTFVARRLHFSVEDEITAVFCGSKKSLANGIPMANILFAGHPALGLLVLPLMVYHQLQLIVCS VIAARYANRDALVEDRAAARA >Mature_340_residues SSMFTKLKKLYDLIDGFVLIMLTAIGIALLAPEFGSSRGPLHLGTITSLGVALVFFLHGAALSRDKLVSGARHWRLHVFV QVFTYVVFPVVGLLLMLSLRNTLPADLLLGVFYLCALPSTVSSSVAMTSMARGNVPGAIFNATISGLIGMAVTPLLMGLV ISASGASMPLGKALMGVALQLLLPFALGQLLRPLIGSWLAKKKHITNKIDRGVIVLIVYSSFCDATAEGLWHHYQWQTIA AVMALAAVLLFVVLGTTTFVARRLHFSVEDEITAVFCGSKKSLANGIPMANILFAGHPALGLLVLPLMVYHQLQLIVCSV IAARYANRDALVEDRAAARA
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71725371, Length=311, Percent_Identity=33.1189710610932, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI14149785, Length=131, Percent_Identity=36.6412213740458, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1788749, Length=334, Percent_Identity=43.4131736526946, Blast_Score=268, Evalue=5e-73, Organism=Saccharomyces cerevisiae, GI6323677, Length=386, Percent_Identity=23.3160621761658, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016833 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36494; Mature: 36363
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMFTKLKKLYDLIDGFVLIMLTAIGIALLAPEFGSSRGPLHLGTITSLGVALVFFLHG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHH AALSRDKLVSGARHWRLHVFVQVFTYVVFPVVGLLLMLSLRNTLPADLLLGVFYLCALPS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH TVSSSVAMTSMARGNVPGAIFNATISGLIGMAVTPLLMGLVISASGASMPLGKALMGVAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH QLLLPFALGQLLRPLIGSWLAKKKHITNKIDRGVIVLIVYSSFCDATAEGLWHHYQWQTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AAVMALAAVLLFVVLGTTTFVARRLHFSVEDEITAVFCGSKKSLANGIPMANILFAGHPA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCHHHHHCCCCHHHHHCCCCHH LGLLVLPLMVYHQLQLIVCSVIAARYANRDALVEDRAAARA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure SSMFTKLKKLYDLIDGFVLIMLTAIGIALLAPEFGSSRGPLHLGTITSLGVALVFFLHG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHH AALSRDKLVSGARHWRLHVFVQVFTYVVFPVVGLLLMLSLRNTLPADLLLGVFYLCALPS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH TVSSSVAMTSMARGNVPGAIFNATISGLIGMAVTPLLMGLVISASGASMPLGKALMGVAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH QLLLPFALGQLLRPLIGSWLAKKKHITNKIDRGVIVLIVYSSFCDATAEGLWHHYQWQTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AAVMALAAVLLFVVLGTTTFVARRLHFSVEDEITAVFCGSKKSLANGIPMANILFAGHPA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCHHHHHCCCCHHHHHCCCCHH LGLLVLPLMVYHQLQLIVCSVIAARYANRDALVEDRAAARA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 7984428 [H]