Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is yagQ [H]
Identifier: 73540125
GI number: 73540125
Start: 458881
End: 459903
Strand: Reverse
Name: yagQ [H]
Synonym: Reut_A0419
Alternate gene names: 73540125
Gene position: 459903-458881 (Counterclockwise)
Preceding gene: 73540126
Following gene: 73540124
Centisome position: 12.08
GC content: 66.96
Gene sequence:
>1023_bases ATGGACAGCGTGGATCTCGAAGTCCTGAGAAGCAGCGTACGGTGGCAGCAGGAAGGCCACCGCGTACTGCTGGTCACCGT AGTCAGAACCTGGGGCTCGTCGCCCCGCCCCGAAGGCGCGATGCTGGCCGTGCGCGACGACGGGCTTGTCGTCGGCTCGG TCTCCGGCGGCTGCATCGAAGACGATCTCATCGACCGCGTGCGCCGGCTTGGCATCACCGCGGATCATCCCGAATCGGTC AAGTACGGCATCAGCGCCGAAGAAGCCCACCGCTTCGGCCTGCCGTGCGGTGGCACCATCGAACTGGTGACCGAGCCGCT CAAGCCGGCGAGCGGCATCGCGGAATTGCTCGACGCCGTCGAGAACGGCAGGCTGGCGACACGCACGCTCGACATGGCCA CCGGCACGGCCACGCTCGGCCCGGCCGAGGCCACCGACGGCCTCGTTTTCGACGGCAATTCGCTGCTGACCATTCATGGC CCGCGCTATCGCATGCTGGTGATCGGCGCCGGGCAGTTGTCGAAATACCTGTGCCAGATCGCCGTGGGCCTGGGCTTCCA GGTCACCGTATGCGACCCGCGCGAGGAATACACGGAAACGTGGGACATCCCCGGCGTGACGATGGTCCGCACCATGCCCG ACGACACCGTGACGGACATGAAGCTCGACGAGCGCTGCGCGGTGATCGCGCTCACGCACGACCCCAAGCTCGACGACCTG GCCCTGATGGAAGCGCTGCGCACCCGCGCGTTCTACGTCGGCGCGCTGGGTTCGCGCCGCAACAACCAGGCCCGGCGCGA ACGTCTCAAGGAATTCGACCTCAACGACGTACAGCTTGCCCGGCTGCACGGTCCGGTCGGTATCTTCATCGGCAGCCGCA CGCCGCCCGAGATCGCCATTTCCATCCTTGCCGAAGTCGTGGCCGCCAAGAACCACGTCTCGCTGCCCGACATCCTGCAG GTGGAAGGCGCCAAGGCGGCACGTGAACTGGCCGCGGGAACCGGCAGCAGCTGCGACACCTGA
Upstream 100 bases:
>100_bases CCGAGGCGCTGTCTGCGCCCGATGACGCCGCACAACAACAAGACGCCGCCCCTGAAGGCGGCGACACGCAACAAACAGAG GAACCCAAGCGGAAGCGATC
Downstream 100 bases:
>100_bases GTGTGAGTTTCGCCATGAATGCTGCCCGCAATGCTCCGCTGATCAAGACCGACCTGCCAACCGGGATTCTTCTGGCAGCC GGATTCGGCCGGCGCTTCGA
Product: sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis / sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MDSVDLEVLRSSVRWQQEGHRVLLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIEDDLIDRVRRLGITADHPESV KYGISAEEAHRFGLPCGGTIELVTEPLKPASGIAELLDAVENGRLATRTLDMATGTATLGPAEATDGLVFDGNSLLTIHG PRYRMLVIGAGQLSKYLCQIAVGLGFQVTVCDPREEYTETWDIPGVTMVRTMPDDTVTDMKLDERCAVIALTHDPKLDDL ALMEALRTRAFYVGALGSRRNNQARRERLKEFDLNDVQLARLHGPVGIFIGSRTPPEIAISILAEVVAAKNHVSLPDILQ VEGAKAARELAAGTGSSCDT
Sequences:
>Translated_340_residues MDSVDLEVLRSSVRWQQEGHRVLLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIEDDLIDRVRRLGITADHPESV KYGISAEEAHRFGLPCGGTIELVTEPLKPASGIAELLDAVENGRLATRTLDMATGTATLGPAEATDGLVFDGNSLLTIHG PRYRMLVIGAGQLSKYLCQIAVGLGFQVTVCDPREEYTETWDIPGVTMVRTMPDDTVTDMKLDERCAVIALTHDPKLDDL ALMEALRTRAFYVGALGSRRNNQARRERLKEFDLNDVQLARLHGPVGIFIGSRTPPEIAISILAEVVAAKNHVSLPDILQ VEGAKAARELAAGTGSSCDT >Mature_340_residues MDSVDLEVLRSSVRWQQEGHRVLLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIEDDLIDRVRRLGITADHPESV KYGISAEEAHRFGLPCGGTIELVTEPLKPASGIAELLDAVENGRLATRTLDMATGTATLGPAEATDGLVFDGNSLLTIHG PRYRMLVIGAGQLSKYLCQIAVGLGFQVTVCDPREEYTETWDIPGVTMVRTMPDDTVTDMKLDERCAVIALTHDPKLDDL ALMEALRTRAFYVGALGSRRNNQARRERLKEFDLNDVQLARLHGPVGIFIGSRTPPEIAISILAEVVAAKNHVSLPDILQ VEGAKAARELAAGTGSSCDT
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786477, Length=305, Percent_Identity=26.5573770491803, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789240, Length=308, Percent_Identity=25.3246753246753, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003777 [H]
Pfam domain/function: PF02625 XdhC_CoxI [H]
EC number: NA
Molecular weight: Translated: 36648; Mature: 36648
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSVDLEVLRSSVRWQQEGHRVLLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIE CCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCCCEEEEECCCEEEECCCCCCCC DDLIDRVRRLGITADHPESVKYGISAEEAHRFGLPCGGTIELVTEPLKPASGIAELLDAV HHHHHHHHHHCCCCCCCCCEEECCCHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHH ENGRLATRTLDMATGTATLGPAEATDGLVFDGNSLLTIHGPRYRMLVIGAGQLSKYLCQI HCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCEEEEEEECCHHHHHHHHH AVGLGFQVTVCDPREEYTETWDIPGVTMVRTMPDDTVTDMKLDERCAVIALTHDPKLDDL HHCCCEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCCCEECCCEEEEEEECCCCCHHH ALMEALRTRAFYVGALGSRRNNQARRERLKEFDLNDVQLARLHGPVGIFIGSRTPPEIAI HHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCHHHHH SILAEVVAAKNHVSLPDILQVEGAKAARELAAGTGSSCDT HHHHHHHHHCCCCCCCHHHEECCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDSVDLEVLRSSVRWQQEGHRVLLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIE CCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCCCEEEEECCCEEEECCCCCCCC DDLIDRVRRLGITADHPESVKYGISAEEAHRFGLPCGGTIELVTEPLKPASGIAELLDAV HHHHHHHHHHCCCCCCCCCEEECCCHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHH ENGRLATRTLDMATGTATLGPAEATDGLVFDGNSLLTIHGPRYRMLVIGAGQLSKYLCQI HCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCEEEEEEECCHHHHHHHHH AVGLGFQVTVCDPREEYTETWDIPGVTMVRTMPDDTVTDMKLDERCAVIALTHDPKLDDL HHCCCEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCCCEECCCEEEEEEECCCCCHHH ALMEALRTRAFYVGALGSRRNNQARRERLKEFDLNDVQLARLHGPVGIFIGSRTPPEIAI HHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCHHHHH SILAEVVAAKNHVSLPDILQVEGAKAARELAAGTGSSCDT HHHHHHHHHCCCCCCCHHHEECCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]