Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is otsA [H]
Identifier: 73540122
GI number: 73540122
Start: 456389
End: 457780
Strand: Direct
Name: otsA [H]
Synonym: Reut_A0416
Alternate gene names: 73540122
Gene position: 456389-457780 (Clockwise)
Preceding gene: 73540121
Following gene: 73540123
Centisome position: 11.99
GC content: 64.87
Gene sequence:
>1392_bases ATGCCAAGACTAGTAGCGGTATCCAACCGGGTTGCCGATCCGCGCAACGTTGCCGCGGGCGGCCTCGCCGTGGCCTTGTC CGAAGCGCTGCGCCAGACTGGCGGGATGTGGTTTGGCTGGAGCGGCAAGGCGCTGGAAACGAACCATGGCGGCACGCCTG GCGAAGGGGAGCTGCACTTGCAGCAAGCGGGCAATGTCACGCTGGCCACTGTGGACATGTGCCGCGAAGACCATGACGCC TACTACCTCGGCTACAGCAACGGTGTCCTGTGGCCCGCATTCCACTACCGGCTGGATCTGGCGGACTTCGACTCGAACTA TCTCAACGGCTACCGTCGCGTGAACCAGCTGTTCGCGCGCAAGCTGGCGCCGCTGCTCAAGCCCGATGACATCATCTGGA TCCACGACTACCACCTGATCCCTCTAGCGGCGGAATTGCGCGCCATCGGCTGCGGACAGCGCATCGGCTTCTTCCTGCAT ATCCCGCTGCCGCCACCGCTGATCCTGGCCGCCATCCCGCAGCATGACTGGCTCATGCGCGCGCTGTTCGCGTACGACCT CATCGGCTTCCAGAGCCACACCGACCTGGAGCATTTCTCGCGCTACGTGCAGAACGAAGCGTTCGCCGAGCCAATGGGCG AACACCGCTATCGCGCGTTCCATCGCACCGTACGTGCCGAGGCGTTCCCGATCGGCATCGATGTGGAGGAGTTTCGGGAA CTCGGTCGGGGCGCTGAAGCACAGGAGACCTTCGAGATGATGCGCGCGCAGTACGCGAGCCGCAGGCTGCTGCTCGGCAT CGACCGACTCGATTACTCCAAGGGCCTGCCGCAGCGGCTCAAGGCCTTCTACCGGCTGCTGGCCGAGTATCCGGAGAACC GCATGAGCGCGACGCTGGTGCAGATCGCGGCGCCGTCGCGCGAATCGGTAGATGCCTATGCCGACCTGCGCAGCGAGATG GAACGGCTGAGTGGTGCCATCAACGGTGAATTCGGCGAGCTGGACTGGATGCCGGTGCGCTATATCCATCGCACCACGGC ACGCAAGAGGCTGCCGGGCTTGTGCCGTGCGAGCCGCGTAGCGCTCGTGACACCGCTGCGCGATGGCATGAATCTCGTGG CGAAGGAATTCATCGCTGCGCAGGATCGTGAAGACCCTGGCGTGCTCGTGCTGTCGCGCTTTGCGGGCGCGGCCGAGCAG CTCAAGGAAGCGCTGCTGGTGAACCCCTACGACACGCACGCCACCGCGCAGGCGATCCAGCAGGCATTGCACATGCCGCT GGCCGAGCGGCAGGCGCGGCATGAGAAGCTGCTGGAGCGCATTCGTACGCAGGACGTGCACTGGTGGAGCCAGGAGTTTC TGCGCGCGCTGACGGAAACGGACGGCGGCTGA
Upstream 100 bases:
>100_bases CGGGCTGATCAACGGCGCCACGCGCCTGTCGGCGCCGTGGGACAGCGTGATCTGAGCGGAACGGGACGGGACGGGGCATG ACAAACACGATCAACCATCT
Downstream 100 bases:
>100_bases AGGCGCTGGGTTTTGCCTGCCGCTGCTGAAGGAGTGTTGCCATGAGCGAGAAACTGGAATCGCAGACTTGCACGCCTTGC CGTGGGGGTATTCCTCCGCT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MPRLVAVSNRVADPRNVAAGGLAVALSEALRQTGGMWFGWSGKALETNHGGTPGEGELHLQQAGNVTLATVDMCREDHDA YYLGYSNGVLWPAFHYRLDLADFDSNYLNGYRRVNQLFARKLAPLLKPDDIIWIHDYHLIPLAAELRAIGCGQRIGFFLH IPLPPPLILAAIPQHDWLMRALFAYDLIGFQSHTDLEHFSRYVQNEAFAEPMGEHRYRAFHRTVRAEAFPIGIDVEEFRE LGRGAEAQETFEMMRAQYASRRLLLGIDRLDYSKGLPQRLKAFYRLLAEYPENRMSATLVQIAAPSRESVDAYADLRSEM ERLSGAINGEFGELDWMPVRYIHRTTARKRLPGLCRASRVALVTPLRDGMNLVAKEFIAAQDREDPGVLVLSRFAGAAEQ LKEALLVNPYDTHATAQAIQQALHMPLAERQARHEKLLERIRTQDVHWWSQEFLRALTETDGG
Sequences:
>Translated_463_residues MPRLVAVSNRVADPRNVAAGGLAVALSEALRQTGGMWFGWSGKALETNHGGTPGEGELHLQQAGNVTLATVDMCREDHDA YYLGYSNGVLWPAFHYRLDLADFDSNYLNGYRRVNQLFARKLAPLLKPDDIIWIHDYHLIPLAAELRAIGCGQRIGFFLH IPLPPPLILAAIPQHDWLMRALFAYDLIGFQSHTDLEHFSRYVQNEAFAEPMGEHRYRAFHRTVRAEAFPIGIDVEEFRE LGRGAEAQETFEMMRAQYASRRLLLGIDRLDYSKGLPQRLKAFYRLLAEYPENRMSATLVQIAAPSRESVDAYADLRSEM ERLSGAINGEFGELDWMPVRYIHRTTARKRLPGLCRASRVALVTPLRDGMNLVAKEFIAAQDREDPGVLVLSRFAGAAEQ LKEALLVNPYDTHATAQAIQQALHMPLAERQARHEKLLERIRTQDVHWWSQEFLRALTETDGG >Mature_462_residues PRLVAVSNRVADPRNVAAGGLAVALSEALRQTGGMWFGWSGKALETNHGGTPGEGELHLQQAGNVTLATVDMCREDHDAY YLGYSNGVLWPAFHYRLDLADFDSNYLNGYRRVNQLFARKLAPLLKPDDIIWIHDYHLIPLAAELRAIGCGQRIGFFLHI PLPPPLILAAIPQHDWLMRALFAYDLIGFQSHTDLEHFSRYVQNEAFAEPMGEHRYRAFHRTVRAEAFPIGIDVEEFREL GRGAEAQETFEMMRAQYASRRLLLGIDRLDYSKGLPQRLKAFYRLLAEYPENRMSATLVQIAAPSRESVDAYADLRSEME RLSGAINGEFGELDWMPVRYIHRTTARKRLPGLCRASRVALVTPLRDGMNLVAKEFIAAQDREDPGVLVLSRFAGAAEQL KEALLVNPYDTHATAQAIQQALHMPLAERQARHEKLLERIRTQDVHWWSQEFLRALTETDGG
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=461, Percent_Identity=46.6377440347072, Blast_Score=389, Evalue=1e-109, Organism=Caenorhabditis elegans, GI115533560, Length=425, Percent_Identity=29.6470588235294, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI115533558, Length=425, Percent_Identity=29.6470588235294, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI71987012, Length=434, Percent_Identity=28.8018433179723, Blast_Score=163, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6319602, Length=474, Percent_Identity=35.2320675105485, Blast_Score=284, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6320279, Length=436, Percent_Identity=26.605504587156, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6323537, Length=412, Percent_Identity=26.6990291262136, Blast_Score=180, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6323917, Length=373, Percent_Identity=28.4182305630027, Blast_Score=168, Evalue=2e-42, Organism=Drosophila melanogaster, GI19920676, Length=495, Percent_Identity=37.1717171717172, Blast_Score=294, Evalue=1e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 52424; Mature: 52293
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLVAVSNRVADPRNVAAGGLAVALSEALRQTGGMWFGWSGKALETNHGGTPGEGELHL CCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCCCCCCCCEEE QQAGNVTLATVDMCREDHDAYYLGYSNGVLWPAFHYRLDLADFDSNYLNGYRRVNQLFAR EECCCEEEEEHHHHHCCCCEEEEEECCCCCCCCHHEEEEHHHCCCHHHHHHHHHHHHHHH KLAPLLKPDDIIWIHDYHLIPLAAELRAIGCGQRIGFFLHIPLPPPLILAAIPQHDWLMR HHHHHCCCCCEEEEECCEECHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCHHHHHH ALFAYDLIGFQSHTDLEHFSRYVQNEAFAEPMGEHRYRAFHRTVRAEAFPIGIDVEEFRE HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LGRGAEAQETFEMMRAQYASRRLLLGIDRLDYSKGLPQRLKAFYRLLAEYPENRMSATLV HCCCCCHHHHHHHHHHHHHCCHHEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH QIAAPSRESVDAYADLRSEMERLSGAINGEFGELDWMPVRYIHRTTARKRLPGLCRASRV EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCE ALVTPLRDGMNLVAKEFIAAQDREDPGVLVLSRFAGAAEQLKEALLVNPYDTHATAQAIQ EEEECCHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH QALHMPLAERQARHEKLLERIRTQDVHWWSQEFLRALTETDGG HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure PRLVAVSNRVADPRNVAAGGLAVALSEALRQTGGMWFGWSGKALETNHGGTPGEGELHL CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCCCCCCCCEEE QQAGNVTLATVDMCREDHDAYYLGYSNGVLWPAFHYRLDLADFDSNYLNGYRRVNQLFAR EECCCEEEEEHHHHHCCCCEEEEEECCCCCCCCHHEEEEHHHCCCHHHHHHHHHHHHHHH KLAPLLKPDDIIWIHDYHLIPLAAELRAIGCGQRIGFFLHIPLPPPLILAAIPQHDWLMR HHHHHCCCCCEEEEECCEECHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCHHHHHH ALFAYDLIGFQSHTDLEHFSRYVQNEAFAEPMGEHRYRAFHRTVRAEAFPIGIDVEEFRE HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LGRGAEAQETFEMMRAQYASRRLLLGIDRLDYSKGLPQRLKAFYRLLAEYPENRMSATLV HCCCCCHHHHHHHHHHHHHCCHHEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH QIAAPSRESVDAYADLRSEMERLSGAINGEFGELDWMPVRYIHRTTARKRLPGLCRASRV EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCE ALVTPLRDGMNLVAKEFIAAQDREDPGVLVLSRFAGAAEQLKEALLVNPYDTHATAQAIQ EEEECCHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH QALHMPLAERQARHEKLLERIRTQDVHWWSQEFLRALTETDGG HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA