Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is yxxF [H]
Identifier: 73539895
GI number: 73539895
Start: 213650
End: 214537
Strand: Direct
Name: yxxF [H]
Synonym: Reut_A0189
Alternate gene names: 73539895
Gene position: 213650-214537 (Clockwise)
Preceding gene: 73539893
Following gene: 73539896
Centisome position: 5.61
GC content: 66.33
Gene sequence:
>888_bases ATGGGCAATCAACAAGCAGGCACAGGCGGTACGTGGCGCATGGTCGCCGCGATGGCGTTGTCGGGCACCATCGGCTGGTT CGTCGTCACCAGCGGCCAGCCGACCATCGACGTGGTGTTCTTCCGCTGCTTGCTCGGCGGCGCGTCGCTGCTGAGCGTGC TGACGCTGCAGCGCGGCTGGGTGCGCATGGACAACGCGCGCATGGGCTGGCTCGCGCTGGGCGGCGTCACTCTGATCCTC AACTGGCTGTGCCTGTTTTCGGCCTATGCGTATAGCGGGATCTCGATCGCGACCGTGGTCTATCACACGCAGCCGTTCTT CCTGCTGATCCTGACTGCGGTGTTCCAGCGCGAGCCGTTTCCCTTCGGCCGGTTGCCATGGCTGCTGCTGGCATTTGCTG GCGTGATGCTGATCACGGGGCTGGAGCACGGCGCGCAGGGGACGGCGATGCTGGCTGGTATCGGGCTGGCCATGCTGGCG GCGCTGTTGTATGCGATCACCACCATGGCGACGCGGCGGCTGCAGGGCATTCCGCCGGGCCAGATCGCAGGGCTGCAGAT GGTGATCGGCGTGCTGATGCTGGCACCGCTGGCGCATCCGGCAGTGGGCACCTTGACGGGGCAGGCATGGGGCGCGCTGC TCGCGCTCGGGTTGATCCACACGGGCGTGATGTACACGCTGCTGTATGGCGCGTTCCAGCGGCTGAGTGTGGTGTCGATC GCGACGCTGTCGTTCATCTACCCACTGGTCGCGATCGTCATTGATGTGGCGGTGTTCGATGTGGTGCTTGGGCCGCTGCA GCTCGCCGGCATGGCGTTGGTGCTGCTTGGCGTGATCGCGAACCAGCTCGGCTGGAGCGTGCCGCTGCGAACGCGTGCCC GAGGCTGA
Upstream 100 bases:
>100_bases CATTCTTTGACTTAGAGTCAAATACTAATTGAGTTCTTGCGGGATTGTTGATCTCTGATCATGATGGAACAATGCACGCA AAGATTCTGCGGAGCACTTC
Downstream 100 bases:
>100_bases CGCGGATATGCATTGACGCGAACCCTGACTACGGCTAATGTAGGCAGGGTAATCGAACGACCGTGCTATTTGCTATGACC ACCGCGCCCCAGACTGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGNQQAGTGGTWRMVAAMALSGTIGWFVVTSGQPTIDVVFFRCLLGGASLLSVLTLQRGWVRMDNARMGWLALGGVTLIL NWLCLFSAYAYSGISIATVVYHTQPFFLLILTAVFQREPFPFGRLPWLLLAFAGVMLITGLEHGAQGTAMLAGIGLAMLA ALLYAITTMATRRLQGIPPGQIAGLQMVIGVLMLAPLAHPAVGTLTGQAWGALLALGLIHTGVMYTLLYGAFQRLSVVSI ATLSFIYPLVAIVIDVAVFDVVLGPLQLAGMALVLLGVIANQLGWSVPLRTRARG
Sequences:
>Translated_295_residues MGNQQAGTGGTWRMVAAMALSGTIGWFVVTSGQPTIDVVFFRCLLGGASLLSVLTLQRGWVRMDNARMGWLALGGVTLIL NWLCLFSAYAYSGISIATVVYHTQPFFLLILTAVFQREPFPFGRLPWLLLAFAGVMLITGLEHGAQGTAMLAGIGLAMLA ALLYAITTMATRRLQGIPPGQIAGLQMVIGVLMLAPLAHPAVGTLTGQAWGALLALGLIHTGVMYTLLYGAFQRLSVVSI ATLSFIYPLVAIVIDVAVFDVVLGPLQLAGMALVLLGVIANQLGWSVPLRTRARG >Mature_294_residues GNQQAGTGGTWRMVAAMALSGTIGWFVVTSGQPTIDVVFFRCLLGGASLLSVLTLQRGWVRMDNARMGWLALGGVTLILN WLCLFSAYAYSGISIATVVYHTQPFFLLILTAVFQREPFPFGRLPWLLLAFAGVMLITGLEHGAQGTAMLAGIGLAMLAA LLYAITTMATRRLQGIPPGQIAGLQMVIGVLMLAPLAHPAVGTLTGQAWGALLALGLIHTGVMYTLLYGAFQRLSVVSIA TLSFIYPLVAIVIDVAVFDVVLGPLQLAGMALVLLGVIANQLGWSVPLRTRARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31254; Mature: 31123
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNQQAGTGGTWRMVAAMALSGTIGWFVVTSGQPTIDVVFFRCLLGGASLLSVLTLQRGW CCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHCC VRMDNARMGWLALGGVTLILNWLCLFSAYAYSGISIATVVYHTQPFFLLILTAVFQREPF EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCHHHHHHHHHHHHCCCC PFGRLPWLLLAFAGVMLITGLEHGAQGTAMLAGIGLAMLAALLYAITTMATRRLQGIPPG CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QIAGLQMVIGVLMLAPLAHPAVGTLTGQAWGALLALGLIHTGVMYTLLYGAFQRLSVVSI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLSFIYPLVAIVIDVAVFDVVLGPLQLAGMALVLLGVIANQLGWSVPLRTRARG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GNQQAGTGGTWRMVAAMALSGTIGWFVVTSGQPTIDVVFFRCLLGGASLLSVLTLQRGW CCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHCC VRMDNARMGWLALGGVTLILNWLCLFSAYAYSGISIATVVYHTQPFFLLILTAVFQREPF EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCHHHHHHHHHHHHCCCC PFGRLPWLLLAFAGVMLITGLEHGAQGTAMLAGIGLAMLAALLYAITTMATRRLQGIPPG CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QIAGLQMVIGVLMLAPLAHPAVGTLTGQAWGALLALGLIHTGVMYTLLYGAFQRLSVVSI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLSFIYPLVAIVIDVAVFDVVLGPLQLAGMALVLLGVIANQLGWSVPLRTRARG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377; 8316082 [H]