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The map label for this gene is slmA [H]

Identifier: 73539888

GI number: 73539888

Start: 206201

End: 206863

Strand: Direct

Name: slmA [H]

Synonym: Reut_A0182

Alternate gene names: 73539888

Gene position: 206201-206863 (Clockwise)

Preceding gene: 73539887

Following gene: 73539892

Centisome position: 5.42

GC content: 69.08

Gene sequence:

>663_bases
ATGGAAAGCAACGGAAACCCGCCGGAAGCGGTCCTGCCGGGCGGGCAGGATGCCGCGCCGGCTACTGAAACCGCGCCGCC
TGCGCGCAAGCGGCCGCGGCCGGGCGAGCGCCGCGTGCAGATCCTGCAGACGCTGGCAGCGATGCTCGAGCACCCGCGCG
GGGAAAAGATCACCACCGCCGCGCTGGCAGCACGCCTGAGCGTGTCGGAGGCCGCGCTGTACCGCCATTTCGCGAGCAAG
GCGCAGATGTACGAAGGCCTGATCGCCTTCATCGAGCAGACCGTGTTCGGCCTGATCAACCAGATCACGACGACCGAGGA
GCATGGCCTGCGCCAGGTGCAGGCCATCGTGCGCATGCTGCTGTCGTTCGCGGAGAAGAACCCCGGCATGACGCGCGTGT
TGACCGGCGAGGCGCTCGTCGGCGAGCACGAGCGCCTGCAGGACCGCATCAACCAGATGGTCGACCGCATCGAGGCCTCG
CTGCGCCAGTGCCTGAAGATCGCCGTGACGCAGGGCGCGTTCCCGGCCGATGCCGATGTCGCGCTGCGCGCCGCGCTGGT
CATGGCGTACGTGCAGGGCCAGTGGCATCGTTATGCCAAGAGCGGTTTCCGCAAGTCGCCGGGCGAGCGCGTGGACGCGC
AGTTGCGCGTGCTGCTCGGCTAG

Upstream 100 bases:

>100_bases
CGCGGGTACGGGCGCGCGTGCCGAACCGGCCGGCGTATGTGGACATAAAAGTACAATCGATGCATCAACTACAACAAAGA
TTGCGGAGAACCGGGTCATG

Downstream 100 bases:

>100_bases
ACCGCACCCTCTCCCGCCGCCGCAACGGCGGCGGGCTTGTCGCGCTGCGGCTGCAAGGCCGCGCCGGCGGCATACCAGTC
CACCTTGCGCGTCACGACCA

Product: nucleoid occlusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MESNGNPPEAVLPGGQDAAPATETAPPARKRPRPGERRVQILQTLAAMLEHPRGEKITTAALAARLSVSEAALYRHFASK
AQMYEGLIAFIEQTVFGLINQITTTEEHGLRQVQAIVRMLLSFAEKNPGMTRVLTGEALVGEHERLQDRINQMVDRIEAS
LRQCLKIAVTQGAFPADADVALRAALVMAYVQGQWHRYAKSGFRKSPGERVDAQLRVLLG

Sequences:

>Translated_220_residues
MESNGNPPEAVLPGGQDAAPATETAPPARKRPRPGERRVQILQTLAAMLEHPRGEKITTAALAARLSVSEAALYRHFASK
AQMYEGLIAFIEQTVFGLINQITTTEEHGLRQVQAIVRMLLSFAEKNPGMTRVLTGEALVGEHERLQDRINQMVDRIEAS
LRQCLKIAVTQGAFPADADVALRAALVMAYVQGQWHRYAKSGFRKSPGERVDAQLRVLLG
>Mature_220_residues
MESNGNPPEAVLPGGQDAAPATETAPPARKRPRPGERRVQILQTLAAMLEHPRGEKITTAALAARLSVSEAALYRHFASK
AQMYEGLIAFIEQTVFGLINQITTTEEHGLRQVQAIVRMLLSFAEKNPGMTRVLTGEALVGEHERLQDRINQMVDRIEAS
LRQCLKIAVTQGAFPADADVALRAALVMAYVQGQWHRYAKSGFRKSPGERVDAQLRVLLG

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082302, Length=188, Percent_Identity=45.2127659574468, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24146; Mature: 24146

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESNGNPPEAVLPGGQDAAPATETAPPARKRPRPGERRVQILQTLAAMLEHPRGEKITTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
ALAARLSVSEAALYRHFASKAQMYEGLIAFIEQTVFGLINQITTTEEHGLRQVQAIVRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LSFAEKNPGMTRVLTGEALVGEHERLQDRINQMVDRIEASLRQCLKIAVTQGAFPADADV
HHHHHCCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALRAALVMAYVQGQWHRYAKSGFRKSPGERVDAQLRVLLG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MESNGNPPEAVLPGGQDAAPATETAPPARKRPRPGERRVQILQTLAAMLEHPRGEKITTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
ALAARLSVSEAALYRHFASKAQMYEGLIAFIEQTVFGLINQITTTEEHGLRQVQAIVRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LSFAEKNPGMTRVLTGEALVGEHERLQDRINQMVDRIEASLRQCLKIAVTQGAFPADADV
HHHHHCCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALRAALVMAYVQGQWHRYAKSGFRKSPGERVDAQLRVLLG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA