Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73539867
Identifier: 73539867
GI number: 73539867
Start: 188156
End: 189358
Strand: Reverse
Name: 73539867
Synonym: Reut_A0161
Alternate gene names: NA
Gene position: 189358-188156 (Counterclockwise)
Preceding gene: 73539868
Following gene: 73539866
Centisome position: 4.97
GC content: 66.42
Gene sequence:
>1203_bases ATGGCCGATCGCCTGCCCATCACCGTGCTGTCCGGATATACCGGTGCCGGCAAGACCACCTTGCTGCAGCACGTCCTTGC TGCGACAGTCGGCAAGCGCGTGGGCGTGGCTGGCAGCCTCCAGCAGGCCGGCGAGCTCGCCGTCCGTGGCGGCTTCGACC ATCTGCTGCTCGAGCCCGCAGGCACGGACGACCCGATGGCAATCGCCGAGGCCGTGCTGTTCGAGGATGAACATGGTGGC AGGGCCACGCTGAGTCTCGACACGCTGGTGACGGTTGTCGATGCATCGACGTTCCTGCGCGACGTCAACGATGCCGAGTT CCTGCACGGCAGCGACGATGTGCACGACAACGGGATCGAGGAAGACGACCGCACCGTGGTCGACGTGCTGATCGCCCAAG TCGAGTTCGCCGACGTGATCGTGCTTAACAAGTCGGATCTCGTCGACGCGAGCGCGCTGGCGCAGCTGGAGGCGATCCTT CGCGCGCTCAACCCGCGTGCGGACATTGTCGCGGCGAGCTTCGGCAAGATTGCTGCCGAACGCGTGCTCGGCACCGGCCG GTTCGACTTCGAAGACACCGCAAGCGCCACGGGCTGGCTGGCCCTGCAGCGTGGCGAGACGCTGCCCGAAGCACACGGCA TCAGCGGCTTCCTCTACCGCCGTCGCCGCCCCTTCCATCCCGCACGCTTTGCCGAGCTGATCCACACCGAGTGGATGCGC GAGCATGGCAGCGTGCTGCGTTCCAAGGGCCTGTTCTGGCTGGCGAGCCGCATGGGCATCGCAGGCGACTGGGCACAGGC CGGAGGCGTATGCCGTCCCGCTGCGGCTGGTGCGTGGTGGGCAGCTCTCGATGCTTCCGAATGGCCGACTGATGCAGCAG ACCTCGCAGCGCTTGAAGCCGACATGCTGGACGAAGGACAGCCTGCCGCCTACGGCGACCGCCGCCAGGAAATCGCGCTG ATCGGCGCAGACCTCGATCGCTCCGCACTGGAGGCTTGTCTCGATGCCTGCCTGCTGACCGATGCCGAGATGGCGGCCGG GCCCGAAGCCTGGGCCGCGTATGCCGATCCGTTCCCGGCATGGGAAGACGCCTTCGACGACGAAGATCACGATCACGATC ACGATCACGATCATGGTCGCCACCATGGCCATGACCACCACCACGGCGGCGACTGCGACTGTGGCCATCCGCATGATCAC TGA
Upstream 100 bases:
>100_bases CCTGCCGGCTGTCGGGCGAAGGGCCTTTCTGGTACAGTCGCAACTTTGTTGCAATAACAGGCGCATCTCACCGGGCGCCC TCTTTCGCGTTCACATCGCC
Downstream 100 bases:
>100_bases GATCGCCGGGCACTTCGCCCGCCTGCGCACACGTGGTCCAGGGCTGTGGATGGCCCTGTGGCTGGCGCTGAGCCTGCTGC TCGCACAGCATGCGGGCCTG
Product: cobalamin synthesis protein/P47K:cobalamin synthesis CobW, C-terminal
Products: NA
Alternate protein names: P47K [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MADRLPITVLSGYTGAGKTTLLQHVLAATVGKRVGVAGSLQQAGELAVRGGFDHLLLEPAGTDDPMAIAEAVLFEDEHGG RATLSLDTLVTVVDASTFLRDVNDAEFLHGSDDVHDNGIEEDDRTVVDVLIAQVEFADVIVLNKSDLVDASALAQLEAIL RALNPRADIVAASFGKIAAERVLGTGRFDFEDTASATGWLALQRGETLPEAHGISGFLYRRRRPFHPARFAELIHTEWMR EHGSVLRSKGLFWLASRMGIAGDWAQAGGVCRPAAAGAWWAALDASEWPTDAADLAALEADMLDEGQPAAYGDRRQEIAL IGADLDRSALEACLDACLLTDAEMAAGPEAWAAYADPFPAWEDAFDDEDHDHDHDHDHGRHHGHDHHHGGDCDCGHPHDH
Sequences:
>Translated_400_residues MADRLPITVLSGYTGAGKTTLLQHVLAATVGKRVGVAGSLQQAGELAVRGGFDHLLLEPAGTDDPMAIAEAVLFEDEHGG RATLSLDTLVTVVDASTFLRDVNDAEFLHGSDDVHDNGIEEDDRTVVDVLIAQVEFADVIVLNKSDLVDASALAQLEAIL RALNPRADIVAASFGKIAAERVLGTGRFDFEDTASATGWLALQRGETLPEAHGISGFLYRRRRPFHPARFAELIHTEWMR EHGSVLRSKGLFWLASRMGIAGDWAQAGGVCRPAAAGAWWAALDASEWPTDAADLAALEADMLDEGQPAAYGDRRQEIAL IGADLDRSALEACLDACLLTDAEMAAGPEAWAAYADPFPAWEDAFDDEDHDHDHDHDHGRHHGHDHHHGGDCDCGHPHDH >Mature_399_residues ADRLPITVLSGYTGAGKTTLLQHVLAATVGKRVGVAGSLQQAGELAVRGGFDHLLLEPAGTDDPMAIAEAVLFEDEHGGR ATLSLDTLVTVVDASTFLRDVNDAEFLHGSDDVHDNGIEEDDRTVVDVLIAQVEFADVIVLNKSDLVDASALAQLEAILR ALNPRADIVAASFGKIAAERVLGTGRFDFEDTASATGWLALQRGETLPEAHGISGFLYRRRRPFHPARFAELIHTEWMRE HGSVLRSKGLFWLASRMGIAGDWAQAGGVCRPAAAGAWWAALDASEWPTDAADLAALEADMLDEGQPAAYGDRRQEIALI GADLDRSALEACLDACLLTDAEMAAGPEAWAAYADPFPAWEDAFDDEDHDHDHDHDHGRHHGHDHHHGGDCDCGHPHDH
Specific function: The presence of P47K is critical for the expression of the nitrile hydratase genes. May stabilize or activate the nitrile hydratase proteins [H]
COG id: COG0523
COG function: function code R; Putative GTPases (G3E family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cobW C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR011629 [H]
Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]
EC number: NA
Molecular weight: Translated: 43049; Mature: 42918
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRLPITVLSGYTGAGKTTLLQHVLAATVGKRVGVAGSLQQAGELAVRGGFDHLLLEPA CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCEEEECCC GTDDPMAIAEAVLFEDEHGGRATLSLDTLVTVVDASTFLRDVNDAEFLHGSDDVHDNGIE CCCCHHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCC EDDRTVVDVLIAQVEFADVIVLNKSDLVDASALAQLEAILRALNPRADIVAASFGKIAAE CCHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RVLGTGRFDFEDTASATGWLALQRGETLPEAHGISGFLYRRRRPFHPARFAELIHTEWMR HHHCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHH EHGSVLRSKGLFWLASRMGIAGDWAQAGGVCRPAAAGAWWAALDASEWPTDAADLAALEA HHHHHHHHCCHHEEHHHCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH DMLDEGQPAAYGDRRQEIALIGADLDRSALEACLDACLLTDAEMAAGPEAWAAYADPFPA HHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCC WEDAFDDEDHDHDHDHDHGRHHGHDHHHGGDCDCGHPHDH HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADRLPITVLSGYTGAGKTTLLQHVLAATVGKRVGVAGSLQQAGELAVRGGFDHLLLEPA CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCEEEECCC GTDDPMAIAEAVLFEDEHGGRATLSLDTLVTVVDASTFLRDVNDAEFLHGSDDVHDNGIE CCCCHHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCC EDDRTVVDVLIAQVEFADVIVLNKSDLVDASALAQLEAILRALNPRADIVAASFGKIAAE CCHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RVLGTGRFDFEDTASATGWLALQRGETLPEAHGISGFLYRRRRPFHPARFAELIHTEWMR HHHCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHH EHGSVLRSKGLFWLASRMGIAGDWAQAGGVCRPAAAGAWWAALDASEWPTDAADLAALEA HHHHHHHHCCHHEEHHHCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH DMLDEGQPAAYGDRRQEIALIGADLDRSALEACLDACLLTDAEMAAGPEAWAAYADPFPA HHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCC WEDAFDDEDHDHDHDHDHGRHHGHDHHHGGDCDCGHPHDH HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2013568 [H]