Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is pssR [C]
Identifier: 73539812
GI number: 73539812
Start: 132084
End: 133040
Strand: Reverse
Name: pssR [C]
Synonym: Reut_A0106
Alternate gene names: 73539812
Gene position: 133040-132084 (Counterclockwise)
Preceding gene: 73539813
Following gene: 73539811
Centisome position: 3.5
GC content: 68.44
Gene sequence:
>957_bases TTGCGTCACATTGATTTCAAGGCGCTCGACGTTTTTCTCCACGTCATGCGCCACGGCAGCATCGGCAACGCCGCTGCGGC ACTCGGCATGCGCGCGCCCACGGTCGTGTATGCGATCCGCAAGCTGCGCGAAGTCACCGGCGACGAGCTGTTCCTGGAGC GTCGGGGCAACCTGGTTCCCACGGCGCGCGGGCTGAAACTGGAGAAAGCCGCATCCGGCATGCTGCAAAGCTGGCACGGC CTGATCGAACACAACCGGCAGGCGCCACGGGAAACCGGACCGCGGCAGACCATGCGCATCGGGTTGTCGATGGCGCTTGG CGATCCGGCCCTGACGCAGATCCTGGCGCGGCTGTCGGCGGCCCTGCCCGAGCGGCAGATCGTCTCCAGCGTGCTCGAAA ATGGCCGGCAGGTGGGACAGGCGCTGCGCAAGGGACTGATCGATTGCGCGGTCACGGTCGACGGCGTGGTATCGCTTGAC GGCATCGCGGCCGAGCACATGCTGATGGCACAGCGCTGCCTGATCGGCCTGCCGCTGGCGGAAACCGGAAACGAGGACCA CGATCCCCGAGAACACTGGACGCTGCTCAGCGACGACGCCGATCCCGACAGCGCCGTGCGGCGCTACCTGGCGAATACCA CGGGCGGCGTGCGGCTGACGGTGGCGCCGTCCTGGAACGGGCAGCTGGCGCTGTGGCGCTCGCGCGGCGGACTGACGCCG GTGCTGAAGTTCAACGTCCCGTGGATCGACGGTGCCAGCGCGGCGTATATCACCGAGGTGCCGCACGGCTTTCCGGCCTG GGGCAACGTGAGCCTGTTCTACCTGGCCGGCTGCGCCGAGGCACCCTGGCTGGCCACGGTGCGCAGGGAATTGCTGACGG TGCTGCGCGGCATTGCGGCGGCCACGATGCCGCTGCCGGCCAATGACGCGCTGCTGCCGCTGTTGCGCGCAGGCTGA
Upstream 100 bases:
>100_bases TGCTTCCGCAAAGTATGGAAACCACCAGATATGGCCCGCCCAAGGCCGGGCGGCAATTTCATTCAGGCACGCGGCAACAT AATCGTTGGGGGGTTCGATA
Downstream 100 bases:
>100_bases TCCGGCCGCAGCGTCGCCAAGCCGGGGTACCATTCCGGGGATGAGAAACCTGGCCCCAGACATGTCCGTACCCGCCTTCG AATCCAAACTGACCCCGCCC
Product: regulatory protein, LysR
Products: NA
Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Family Transcriptional Regulator; Transcriptional Regulator LysR
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRHIDFKALDVFLHVMRHGSIGNAAAALGMRAPTVVYAIRKLREVTGDELFLERRGNLVPTARGLKLEKAASGMLQSWHG LIEHNRQAPRETGPRQTMRIGLSMALGDPALTQILARLSAALPERQIVSSVLENGRQVGQALRKGLIDCAVTVDGVVSLD GIAAEHMLMAQRCLIGLPLAETGNEDHDPREHWTLLSDDADPDSAVRRYLANTTGGVRLTVAPSWNGQLALWRSRGGLTP VLKFNVPWIDGASAAYITEVPHGFPAWGNVSLFYLAGCAEAPWLATVRRELLTVLRGIAAATMPLPANDALLPLLRAG
Sequences:
>Translated_318_residues MRHIDFKALDVFLHVMRHGSIGNAAAALGMRAPTVVYAIRKLREVTGDELFLERRGNLVPTARGLKLEKAASGMLQSWHG LIEHNRQAPRETGPRQTMRIGLSMALGDPALTQILARLSAALPERQIVSSVLENGRQVGQALRKGLIDCAVTVDGVVSLD GIAAEHMLMAQRCLIGLPLAETGNEDHDPREHWTLLSDDADPDSAVRRYLANTTGGVRLTVAPSWNGQLALWRSRGGLTP VLKFNVPWIDGASAAYITEVPHGFPAWGNVSLFYLAGCAEAPWLATVRRELLTVLRGIAAATMPLPANDALLPLLRAG >Mature_318_residues MRHIDFKALDVFLHVMRHGSIGNAAAALGMRAPTVVYAIRKLREVTGDELFLERRGNLVPTARGLKLEKAASGMLQSWHG LIEHNRQAPRETGPRQTMRIGLSMALGDPALTQILARLSAALPERQIVSSVLENGRQVGQALRKGLIDCAVTVDGVVSLD GIAAEHMLMAQRCLIGLPLAETGNEDHDPREHWTLLSDDADPDSAVRRYLANTTGGVRLTVAPSWNGQLALWRSRGGLTP VLKFNVPWIDGASAAYITEVPHGFPAWGNVSLFYLAGCAEAPWLATVRRELLTVLRGIAAATMPLPANDALLPLLRAG
Specific function: Could be the regulatory protein for phosphatidylserine synthetase [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34411; Mature: 34411
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHIDFKALDVFLHVMRHGSIGNAAAALGMRAPTVVYAIRKLREVTGDELFLERRGNLVP CCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCC TARGLKLEKAASGMLQSWHGLIEHNRQAPRETGPRQTMRIGLSMALGDPALTQILARLSA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ALPERQIVSSVLENGRQVGQALRKGLIDCAVTVDGVVSLDGIAAEHMLMAQRCLIGLPLA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCH ETGNEDHDPREHWTLLSDDADPDSAVRRYLANTTGGVRLTVAPSWNGQLALWRSRGGLTP HCCCCCCCCHHHCEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCE VLKFNVPWIDGASAAYITEVPHGFPAWGNVSLFYLAGCAEAPWLATVRRELLTVLRGIAA EEEECCCEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ATMPLPANDALLPLLRAG HCCCCCCCCHHHHHHHCC >Mature Secondary Structure MRHIDFKALDVFLHVMRHGSIGNAAAALGMRAPTVVYAIRKLREVTGDELFLERRGNLVP CCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCC TARGLKLEKAASGMLQSWHGLIEHNRQAPRETGPRQTMRIGLSMALGDPALTQILARLSA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ALPERQIVSSVLENGRQVGQALRKGLIDCAVTVDGVVSLDGIAAEHMLMAQRCLIGLPLA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCH ETGNEDHDPREHWTLLSDDADPDSAVRRYLANTTGGVRLTVAPSWNGQLALWRSRGGLTP HCCCCCCCCHHHCEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCE VLKFNVPWIDGASAAYITEVPHGFPAWGNVSLFYLAGCAEAPWLATVRRELLTVLRGIAA EEEECCCEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ATMPLPANDALLPLLRAG HCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA