Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73539803
Identifier: 73539803
GI number: 73539803
Start: 123957
End: 125207
Strand: Reverse
Name: 73539803
Synonym: Reut_A0097
Alternate gene names: NA
Gene position: 125207-123957 (Counterclockwise)
Preceding gene: 73539804
Following gene: 73539789
Centisome position: 3.29
GC content: 67.15
Gene sequence:
>1251_bases ATGGTGCCGGCCCCCACGCCGCCCGCCATGCCGCCGCAGGCGCCACTGCCTGAGGCGGTCGAGCCCAAGTACTCGCCGCT CGCGCGCGTGGGCGTGGTGTGCTTCACGCTGCTGGTGGTCTACGCCAGCCTGTACCCGTTCACCGGCTGGGTCGATAACG GCGTCTCGCCGTTTGCGTTCCTGACCGCGCCCAAGCCGCGCTACATCACCGAGTTCGATCTGCTGACCAATGTGCTGGGC TACTGTCCGTTCGGCGCGCTCGTCGTGCTCGCGCTGCATCCGCGCATATCGGGCGCGCGCGCCACGCTGATCGCACTGGT CGCGGGCGCCCTGCTCTCCGGCTGCATGGAGGCGCTGCAGACCTGGCTGCCGAGCCGCATCTCGTCGAATATCGACCTCA TCACCAACGCACTGGGCGCGCTGCTCGGCGGCGCCGTGGTCGCGCCGTTCACCTCCGCGCTGATCGACCGCGGCACGCTC ACGCAGTTGCGCACCGCGTGGTTCGAGCCGCACGCAAGTTTCGCCATCATCCTGCTGATGCTGTGGCCGTTCGCGCAGAT ATTCCCGCAGGAACACCTGTTCGGCATGGGCGGCATCGTGCGCGAATGGCTGACCGACCCGGACTCATGGCCGATGCAGG TACTGCAGATGCTAGTGCCGGATCTGCCCGCGTGGCAGGAAAGCATCGGCCTGCGTCCGGACGACATGCAGAGCCAGCAG TTGCTCGAAACGCTCGTGACGGCGAGCAGCTGGCTCGGCACGGGACTGTTCGCATCGATCTCGATGCGGCGGAACGCGCC GATGCTACGCATTCTCGCCGGCTTGCTCGCCGCGGCGCTGCTGCTGAAGGCTGCGGTAGCGGAACTGCAGTTTCCCGATG GCAACGCTTTCATCTGGCTGTCCGAAGGCGGCCGCTTCGCGCTGCTGACCAGCTCGCTGGCGCTGGCGCTGTTGCTATAC GTGCCGCGCTGGCTGCGCGCGGTGCTGGCCATGGCGGCGCTGATCACGCTGGTCGTGCTCACCAATGTGCTGCCGTCGAA TCCGTATGCGTGGATCTCCGAGCAAGGCTGGCGCATGGGGCGGTTTGTGCATTTCAACAGCCTGGCGCAGTGGCTGGGGT GGCTGTGGCCGTTCCTCGCGTTCTGCTATGTGATGTGGCGGTTTGAGCAGGTGAGCCTGAAGCGGCATGAGCGGCGCAAG GCGGCCGCGGCGCGGAGGGAGGCTGGGAAGAGGGAGAAGGAGGTGGTGTGA
Upstream 100 bases:
>100_bases CGGCGTCAAGGCACTGGCGGACGCGACCGACAAGGTCATTGCCGACATGCTGGCGTGGGCGGCCGGGCTGCCCTTGCAGG GCAAGTAAGGAAGCAACGCC
Downstream 100 bases:
>100_bases GGCGGGCCGGCAGCGCGCATCGGCGCTCCGCCCCTCCTGTGCGAGCAGGCAGAAGACTGCCTGCGCCGAGTATCAGACGT TGAGTGACTGACCCGCATCG
Product: VanZ like protein
Products: NA
Alternate protein names: VanZ Like Protein; Transmembrane Protein; Vanz Family Protein
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MVPAPTPPAMPPQAPLPEAVEPKYSPLARVGVVCFTLLVVYASLYPFTGWVDNGVSPFAFLTAPKPRYITEFDLLTNVLG YCPFGALVVLALHPRISGARATLIALVAGALLSGCMEALQTWLPSRISSNIDLITNALGALLGGAVVAPFTSALIDRGTL TQLRTAWFEPHASFAIILLMLWPFAQIFPQEHLFGMGGIVREWLTDPDSWPMQVLQMLVPDLPAWQESIGLRPDDMQSQQ LLETLVTASSWLGTGLFASISMRRNAPMLRILAGLLAAALLLKAAVAELQFPDGNAFIWLSEGGRFALLTSSLALALLLY VPRWLRAVLAMAALITLVVLTNVLPSNPYAWISEQGWRMGRFVHFNSLAQWLGWLWPFLAFCYVMWRFEQVSLKRHERRK AAAARREAGKREKEVV
Sequences:
>Translated_416_residues MVPAPTPPAMPPQAPLPEAVEPKYSPLARVGVVCFTLLVVYASLYPFTGWVDNGVSPFAFLTAPKPRYITEFDLLTNVLG YCPFGALVVLALHPRISGARATLIALVAGALLSGCMEALQTWLPSRISSNIDLITNALGALLGGAVVAPFTSALIDRGTL TQLRTAWFEPHASFAIILLMLWPFAQIFPQEHLFGMGGIVREWLTDPDSWPMQVLQMLVPDLPAWQESIGLRPDDMQSQQ LLETLVTASSWLGTGLFASISMRRNAPMLRILAGLLAAALLLKAAVAELQFPDGNAFIWLSEGGRFALLTSSLALALLLY VPRWLRAVLAMAALITLVVLTNVLPSNPYAWISEQGWRMGRFVHFNSLAQWLGWLWPFLAFCYVMWRFEQVSLKRHERRK AAAARREAGKREKEVV >Mature_416_residues MVPAPTPPAMPPQAPLPEAVEPKYSPLARVGVVCFTLLVVYASLYPFTGWVDNGVSPFAFLTAPKPRYITEFDLLTNVLG YCPFGALVVLALHPRISGARATLIALVAGALLSGCMEALQTWLPSRISSNIDLITNALGALLGGAVVAPFTSALIDRGTL TQLRTAWFEPHASFAIILLMLWPFAQIFPQEHLFGMGGIVREWLTDPDSWPMQVLQMLVPDLPAWQESIGLRPDDMQSQQ LLETLVTASSWLGTGLFASISMRRNAPMLRILAGLLAAALLLKAAVAELQFPDGNAFIWLSEGGRFALLTSSLALALLLY VPRWLRAVLAMAALITLVVLTNVLPSNPYAWISEQGWRMGRFVHFNSLAQWLGWLWPFLAFCYVMWRFEQVSLKRHERRK AAAARREAGKREKEVV
Specific function: Unknown
COG id: COG5652
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45904; Mature: 45904
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPAPTPPAMPPQAPLPEAVEPKYSPLARVGVVCFTLLVVYASLYPFTGWVDNGVSPFAF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE LTAPKPRYITEFDLLTNVLGYCPFGALVVLALHPRISGARATLIALVAGALLSGCMEALQ EECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TWLPSRISSNIDLITNALGALLGGAVVAPFTSALIDRGTLTQLRTAWFEPHASFAIILLM HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH LWPFAQIFPQEHLFGMGGIVREWLTDPDSWPMQVLQMLVPDLPAWQESIGLRPDDMQSQQ HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCHHHH LLETLVTASSWLGTGLFASISMRRNAPMLRILAGLLAAALLLKAAVAELQFPDGNAFIWL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE SEGGRFALLTSSLALALLLYVPRWLRAVLAMAALITLVVLTNVLPSNPYAWISEQGWRMG ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHH RFVHFNSLAQWLGWLWPFLAFCYVMWRFEQVSLKRHERRKAAAARREAGKREKEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MVPAPTPPAMPPQAPLPEAVEPKYSPLARVGVVCFTLLVVYASLYPFTGWVDNGVSPFAF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE LTAPKPRYITEFDLLTNVLGYCPFGALVVLALHPRISGARATLIALVAGALLSGCMEALQ EECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TWLPSRISSNIDLITNALGALLGGAVVAPFTSALIDRGTLTQLRTAWFEPHASFAIILLM HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH LWPFAQIFPQEHLFGMGGIVREWLTDPDSWPMQVLQMLVPDLPAWQESIGLRPDDMQSQQ HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCHHHH LLETLVTASSWLGTGLFASISMRRNAPMLRILAGLLAAALLLKAAVAELQFPDGNAFIWL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE SEGGRFALLTSSLALALLLYVPRWLRAVLAMAALITLVVLTNVLPSNPYAWISEQGWRMG ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHH RFVHFNSLAQWLGWLWPFLAFCYVMWRFEQVSLKRHERRKAAAARREAGKREKEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA