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The map label for this gene is ybgJ [H]

Identifier: 73539793

GI number: 73539793

Start: 106384

End: 107034

Strand: Direct

Name: ybgJ [H]

Synonym: Reut_A0087

Alternate gene names: 73539793

Gene position: 106384-107034 (Clockwise)

Preceding gene: 73539792

Following gene: 73539794

Centisome position: 2.79

GC content: 69.28

Gene sequence:

>651_bases
ATGACTTCCTGTACCGTCCACCGTCTTGCCGAACAGGCGCTGCTTTGCAGCGCGCCGCCGCCGGCCTCGCTTGAGGTCCA
GCGCCGCATCTGGGCCATGGCAGCGCGCGCCGAAGACTGGCGCGGCGTGGTCGATGTCGTGCCCGGCATGAACAACCTGA
CGGTGATCTTCGACGGCACGGCCGATGTCGCGGCGCTGGAGCGCAACCTGAAGCTCGCCTGGGCTTCTGGCGAGGCGCAC
AACGCGACAGGGCGGCTCGTGGAGATTCCGGTTCGCTACGGCGGCGAGCATGGGCCCGACCTGGCCGATGTGGCCGCGCA
TACGGGGCTGAGCGCGCAGGAAGTCGTGCGCCGTCACAGCGCTGGCGAGTACGTTGTGTATTTCCTCGGCTTCCAGCCCG
GCTTTGCGTACATGGGTGGACTCGCACCGGAGCTCGCCACGCCACGGCGGCGCGAGCCGCGGCTCGCGGTGCCGGCAGGT
TCAGTCGGCATTGGCGGCGAGCAGACGGGCATCTATCCGGCCGTCGCGCCGGGCGGCTGGCAACTGATCGGGCGTACCGA
TGCCGCGCTGTTCGTGGCGGACCGCGATCCGCCTTCCTTGTTCGCCCCCGGCGACACGGTGCGCTTTATTGCCGAGGAGG
TCATCGCGTGA

Upstream 100 bases:

>100_bases
ATGATGATTCATCGATAAATTGTCGATGAAAAGCTGATGAGTCACATCTGGAGCCATCCCGGCTTACACTGATCAGCAGT
GTTCCAGCCGGTGTTGCCTC

Downstream 100 bases:

>100_bases
TCGAGATCATCCGACCGGGTGCGCTGGCTTCCGTACAAGACCTCGGCCGCACCGGCTTTCGCCGCTTCGGCGTCGGACGC
TCCGGCGCCATGGACCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTSCTVHRLAEQALLCSAPPPASLEVQRRIWAMAARAEDWRGVVDVVPGMNNLTVIFDGTADVAALERNLKLAWASGEAH
NATGRLVEIPVRYGGEHGPDLADVAAHTGLSAQEVVRRHSAGEYVVYFLGFQPGFAYMGGLAPELATPRRREPRLAVPAG
SVGIGGEQTGIYPAVAPGGWQLIGRTDAALFVADRDPPSLFAPGDTVRFIAEEVIA

Sequences:

>Translated_216_residues
MTSCTVHRLAEQALLCSAPPPASLEVQRRIWAMAARAEDWRGVVDVVPGMNNLTVIFDGTADVAALERNLKLAWASGEAH
NATGRLVEIPVRYGGEHGPDLADVAAHTGLSAQEVVRRHSAGEYVVYFLGFQPGFAYMGGLAPELATPRRREPRLAVPAG
SVGIGGEQTGIYPAVAPGGWQLIGRTDAALFVADRDPPSLFAPGDTVRFIAEEVIA
>Mature_215_residues
TSCTVHRLAEQALLCSAPPPASLEVQRRIWAMAARAEDWRGVVDVVPGMNNLTVIFDGTADVAALERNLKLAWASGEAHN
ATGRLVEIPVRYGGEHGPDLADVAAHTGLSAQEVVRRHSAGEYVVYFLGFQPGFAYMGGLAPELATPRRREPRLAVPAGS
VGIGGEQTGIYPAVAPGGWQLIGRTDAALFVADRDPPSLFAPGDTVRFIAEEVIA

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=215, Percent_Identity=53.4883720930233, Blast_Score=221, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 22936; Mature: 22805

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSCTVHRLAEQALLCSAPPPASLEVQRRIWAMAARAEDWRGVVDVVPGMNNLTVIFDGT
CCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHCCCEEECCCCCCEEEEEECC
ADVAALERNLKLAWASGEAHNATGRLVEIPVRYGGEHGPDLADVAAHTGLSAQEVVRRHS
CCHHHHHCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHCC
AGEYVVYFLGFQPGFAYMGGLAPELATPRRREPRLAVPAGSVGIGGEQTGIYPAVAPGGW
CCCEEEEEEECCCCHHHHCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCE
QLIGRTDAALFVADRDPPSLFAPGDTVRFIAEEVIA
EEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHCC
>Mature Secondary Structure 
TSCTVHRLAEQALLCSAPPPASLEVQRRIWAMAARAEDWRGVVDVVPGMNNLTVIFDGT
CCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHCCCEEECCCCCCEEEEEECC
ADVAALERNLKLAWASGEAHNATGRLVEIPVRYGGEHGPDLADVAAHTGLSAQEVVRRHS
CCHHHHHCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHCC
AGEYVVYFLGFQPGFAYMGGLAPELATPRRREPRLAVPAGSVGIGGEQTGIYPAVAPGGW
CCCEEEEEEECCCCHHHHCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCE
QLIGRTDAALFVADRDPPSLFAPGDTVRFIAEEVIA
EEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]