Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is mreD [C]
Identifier: 73539784
GI number: 73539784
Start: 96886
End: 97398
Strand: Direct
Name: mreD [C]
Synonym: Reut_A0078
Alternate gene names: 73539784
Gene position: 96886-97398 (Clockwise)
Preceding gene: 73539783
Following gene: 73539785
Centisome position: 2.55
GC content: 66.08
Gene sequence:
>513_bases ATGACCAATCCCCAGTACCTGCTGCGTCCGGTGAACCCGGTGTTCATCGCGTTCAGCTTCGTCATGGCCTTCCTGTTCAA CCTGATGCCGTGGGGCATCACCCTGTGGATCCCGGACATGGTGGCGCTGGTGCTGGTGTTCTGGAACATCCACCAGCCGC GCAAGGTCGGCATGGGCGTGGCGTTCGCGCTGGGCCTGTTGATGGACGTGCATGATGCGCGCCTGCTCGGCGAACACGCG GTGGCCTATACGCTGCTGGCCTACTTCGCCATTACCATCCATCGCCGTGTGCTGTGGTTCACGGTCTATACGCAGGCGCT GCACGTGCTGCCGCTGCTGTTTATCGCGCATGCGGTGCCGGTGGTGATCCGCCTGGCCATGGGCGCGCCGCTGCCGGGCT GGCCGCTGCTTGTCGCCCCAGGCATCGAGGCGCTGCTGTGGCCATTGGCCACGGCAGTGCTGCTCGCGCCGCAGCGCCGC TCGGTCGACGTCGACGAGACGCGCCCGATCTGA
Upstream 100 bases:
>100_bases CCCCGGCCAAGGGTGCCCGCTCGGCGGCCGCGCGTGCCGCTGCGGCCAGCGCGGCGGCGGCAAAGGCCGCATCCGCTCCC GCCGCCAAGGAGGCCCAGCA
Downstream 100 bases:
>100_bases GCGCGACCCACGCATCCTATCCGGCAGTACCATGACCGAAATCCGCAACGTCGAACTGGAAATCGGCCGCTTCCGCCTCC GCGTGGCGGCCGCGGCGCTG
Product: rod shape-determining MreD transmembrane protein
Products: NA
Alternate protein names: Rod Shape-Determining MreD Transmembrane Protein; Rod Shape-Determining Protein; MreD Rod Shape-Determining Protein; Rod Shape-Determining MreD; Rod Shape-Determining Protein Mred; Rod Shape-Determining MRED Transmembrane Protein
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTNPQYLLRPVNPVFIAFSFVMAFLFNLMPWGITLWIPDMVALVLVFWNIHQPRKVGMGVAFALGLLMDVHDARLLGEHA VAYTLLAYFAITIHRRVLWFTVYTQALHVLPLLFIAHAVPVVIRLAMGAPLPGWPLLVAPGIEALLWPLATAVLLAPQRR SVDVDETRPI
Sequences:
>Translated_170_residues MTNPQYLLRPVNPVFIAFSFVMAFLFNLMPWGITLWIPDMVALVLVFWNIHQPRKVGMGVAFALGLLMDVHDARLLGEHA VAYTLLAYFAITIHRRVLWFTVYTQALHVLPLLFIAHAVPVVIRLAMGAPLPGWPLLVAPGIEALLWPLATAVLLAPQRR SVDVDETRPI >Mature_169_residues TNPQYLLRPVNPVFIAFSFVMAFLFNLMPWGITLWIPDMVALVLVFWNIHQPRKVGMGVAFALGLLMDVHDARLLGEHAV AYTLLAYFAITIHRRVLWFTVYTQALHVLPLLFIAHAVPVVIRLAMGAPLPGWPLLVAPGIEALLWPLATAVLLAPQRRS VDVDETRPI
Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]
COG id: COG2891
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19067; Mature: 18936
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPQYLLRPVNPVFIAFSFVMAFLFNLMPWGITLWIPDMVALVLVFWNIHQPRKVGMGV CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AFALGLLMDVHDARLLGEHAVAYTLLAYFAITIHRRVLWFTVYTQALHVLPLLFIAHAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIRLAMGAPLPGWPLLVAPGIEALLWPLATAVLLAPQRRSVDVDETRPI HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TNPQYLLRPVNPVFIAFSFVMAFLFNLMPWGITLWIPDMVALVLVFWNIHQPRKVGMGV CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AFALGLLMDVHDARLLGEHAVAYTLLAYFAITIHRRVLWFTVYTQALHVLPLLFIAHAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIRLAMGAPLPGWPLLVAPGIEALLWPLATAVLLAPQRRSVDVDETRPI HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA