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The map label for this gene is ydhC [H]

Identifier: 73539755

GI number: 73539755

Start: 63789

End: 64526

Strand: Direct

Name: ydhC [H]

Synonym: Reut_A0049

Alternate gene names: 73539755

Gene position: 63789-64526 (Clockwise)

Preceding gene: 73539749

Following gene: 73539756

Centisome position: 1.68

GC content: 67.07

Gene sequence:

>738_bases
ATGCTGGTGACGTCCGTGACACAAACGCTTCCGAAAACCGCCCGATTGCGCACGCTGGGCATGTCCGCCGAGATCGCGGC
GCGCCTGCGCACGATGATTGAAGAGGGCGAACTGCCGCCCGGCGAACGCATCGACGAGCGGGCCTTCTGCGAGGCGTTCG
ATGTCTCGAAGACGCCGCTGCGCGAGGCGCTCAAGGTGCTGGTGGCCGAAGGGCTGGTGCTGCATCGGCAGTACATCGGC
TACCGTGTCGCGCCACTGGACCTGGACGAACTGCGGGCGACGTTCGAAACGCTGCACGGCCTGGAGGCGACTGCCGGCGA
ACTGGCCGCGCAGCGGCTGACCGATGCGGGGCGGACCAAGCTCGAGCGCCGGCACCAGGCCATGATCGAGGCGCACGCGG
CGGGCCGCCGTACCGACTATTTCCGCATCAATCAGGAAATCCACCAGCTCATCATCGACGGCGCGGCCAATCCGGTGCTG
GCCAACGTGTATGCCGCGCTGATGAGCAAGGTGCACCGCGCGCGCGGCGCCGCCAATGCCGATTCGCTGCGCTGGCAGGA
GTCGCATGAGGAACATGAGGAAATCATGGCCGCGCTGCGCGAGCCCGGCTGTCCGCGGCTGGCGCAGGTGCTGCGCCGGC
ATTCCGAGAACACCGCCAAAGAAGTGCTGACCGTGGTCGCGCGCTCGCTCGCAGGCGAGGCCGTCCGCCAAGCCAATCCA
TCGAAGGGAAAACAATGA

Upstream 100 bases:

>100_bases
TACGTAATCTGTAATTACAACTCTCGTAAGTCATTGATTTTACGTGTGCACGGTTGCACAATTTCCGGGTGTGATAGCCT
TAGAATGGTGCAAATTCCCC

Downstream 100 bases:

>100_bases
AACTGGTAAGAACTGGCCAGCCCGGCGCCGAGCGCCCGGGCCTGATCGACGCGCAGGGCAAGGTACGCGACCTGTCGGGC
GTGGTGACCGACATCAATGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLVTSVTQTLPKTARLRTLGMSAEIAARLRTMIEEGELPPGERIDERAFCEAFDVSKTPLREALKVLVAEGLVLHRQYIG
YRVAPLDLDELRATFETLHGLEATAGELAAQRLTDAGRTKLERRHQAMIEAHAAGRRTDYFRINQEIHQLIIDGAANPVL
ANVYAALMSKVHRARGAANADSLRWQESHEEHEEIMAALREPGCPRLAQVLRRHSENTAKEVLTVVARSLAGEAVRQANP
SKGKQ

Sequences:

>Translated_245_residues
MLVTSVTQTLPKTARLRTLGMSAEIAARLRTMIEEGELPPGERIDERAFCEAFDVSKTPLREALKVLVAEGLVLHRQYIG
YRVAPLDLDELRATFETLHGLEATAGELAAQRLTDAGRTKLERRHQAMIEAHAAGRRTDYFRINQEIHQLIIDGAANPVL
ANVYAALMSKVHRARGAANADSLRWQESHEEHEEIMAALREPGCPRLAQVLRRHSENTAKEVLTVVARSLAGEAVRQANP
SKGKQ
>Mature_245_residues
MLVTSVTQTLPKTARLRTLGMSAEIAARLRTMIEEGELPPGERIDERAFCEAFDVSKTPLREALKVLVAEGLVLHRQYIG
YRVAPLDLDELRATFETLHGLEATAGELAAQRLTDAGRTKLERRHQAMIEAHAAGRRTDYFRINQEIHQLIIDGAANPVL
ANVYAALMSKVHRARGAANADSLRWQESHEEHEEIMAALREPGCPRLAQVLRRHSENTAKEVLTVVARSLAGEAVRQANP
SKGKQ

Specific function: Transcriptional Repressor For The Pyruvate Dehydrogenase Complex Genes ACEef And Lpd. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000485
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27193; Mature: 27193

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTSVTQTLPKTARLRTLGMSAEIAARLRTMIEEGELPPGERIDERAFCEAFDVSKTPL
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHH
REALKVLVAEGLVLHRQYIGYRVAPLDLDELRATFETLHGLEATAGELAAQRLTDAGRTK
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LERRHQAMIEAHAAGRRTDYFRINQEIHQLIIDGAANPVLANVYAALMSKVHRARGAANA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
DSLRWQESHEEHEEIMAALREPGCPRLAQVLRRHSENTAKEVLTVVARSLAGEAVRQANP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SKGKQ
CCCCC
>Mature Secondary Structure
MLVTSVTQTLPKTARLRTLGMSAEIAARLRTMIEEGELPPGERIDERAFCEAFDVSKTPL
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHH
REALKVLVAEGLVLHRQYIGYRVAPLDLDELRATFETLHGLEATAGELAAQRLTDAGRTK
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LERRHQAMIEAHAAGRRTDYFRINQEIHQLIIDGAANPVLANVYAALMSKVHRARGAANA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
DSLRWQESHEEHEEIMAALREPGCPRLAQVLRRHSENTAKEVLTVVARSLAGEAVRQANP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SKGKQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]