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The map label for this gene is yedU [C]

Identifier: 73539732

GI number: 73539732

Start: 39188

End: 39925

Strand: Direct

Name: yedU [C]

Synonym: Reut_A0026

Alternate gene names: 73539732

Gene position: 39188-39925 (Clockwise)

Preceding gene: 73539731

Following gene: 73539735

Centisome position: 1.03

GC content: 61.65

Gene sequence:

>738_bases
ATGCTTACTCATACCGCCCACGCCCTCAGGAGACCCGCCATGAAAGTCCTGATCGTCCTCACCTCACACGACCAACTCGG
CAACACCGGCGAGAAAACCGGCTTCTGGCTCGAAGAACTCGCCGCGCCGTACTATGTGCTGAAAGATGCCGGCGTCAACG
TCACGCTGGCATCCGTGAAAGGCGGCCAACCGCCACTCGACCCCAAGAGCAACGACCCCTCGTTCCAGACAACCGCGACG
CGGCGCTTCGAAGATGATGCCGACGCGAAAGCCGCCTTGTCATCGACGCAGAAACTCTCCGATGTATCGGCCGGCGACTA
CGACGCGGTGTTCTATCCCGGCGGCCACGGTCCGATGTGGGATCTGGCCGAAGATGCAGACTCCAAAGCGCTGATCGAAG
CGACGTTTGCCAGTGGCAAGCCGGTTGCATTGGTATGCCATGCGCCGGGCGTACTGCGCCACGTGAAAGCGCAGGACGGC
AGCCCACTGGTCAAGGGCAAGAACGTTACGGGATTCACGAACAGCGAGGAGGAGGCCGTCGGCCTGACTGAAGTGGTTCC
GTTCCTCGTCGAAGACATGCTGAAGGCGAACGGCGCGAATTACTCCAAGGCCGGCGACTGGCAGCCGTATGTGGTGACGG
ATGGATTGCTGATCACCGGTCAGAATCCGGCGTCGTCGGATCCCGCTGCCAATGCGCTGCTGACGATGCTGAAGCATCGC
GGGGGCGGGAAAGGCTGA

Upstream 100 bases:

>100_bases
GGCACCCGCATTGCTGACGCCAATTCGCTAGCCTGCCGCGAGCGCCGCAAGCGCCGCCTGCGGGCGGCGTTGTTCTTTGA
TTTTGCAGGTGTCATGCACC

Downstream 100 bases:

>100_bases
TCGGCGCCGGACGATGGTGGCGCATTGCGAGTCGTCTATCGATCAGGCGACCGCTGCGACAGTAGCCACAGCATCGTGCT
GACTGCCTCGGTCTTGGAAC

Product: ThiJ/PfpI

Products: NA

Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; Intracellular Protease/Amidase; DJ-1/PfpI Family Protein; DJ-1/PfpI Family; NonF-Related Protein; Peptidase; DJ-1/PfpI-Family Transcriptional Regulator; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Transcriptional Regulator Fis Family; Intracellular Protease Amidase; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; ThiJ/PfpI Protein; Regulatory Protein; Fis Family Transcriptional Regulator; DJ-1/PfpI Family Transcriptional Regulator; ThiJ Protein; NonF Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLTHTAHALRRPAMKVLIVLTSHDQLGNTGEKTGFWLEELAAPYYVLKDAGVNVTLASVKGGQPPLDPKSNDPSFQTTAT
RRFEDDADAKAALSSTQKLSDVSAGDYDAVFYPGGHGPMWDLAEDADSKALIEATFASGKPVALVCHAPGVLRHVKAQDG
SPLVKGKNVTGFTNSEEEAVGLTEVVPFLVEDMLKANGANYSKAGDWQPYVVTDGLLITGQNPASSDPAANALLTMLKHR
GGGKG

Sequences:

>Translated_245_residues
MLTHTAHALRRPAMKVLIVLTSHDQLGNTGEKTGFWLEELAAPYYVLKDAGVNVTLASVKGGQPPLDPKSNDPSFQTTAT
RRFEDDADAKAALSSTQKLSDVSAGDYDAVFYPGGHGPMWDLAEDADSKALIEATFASGKPVALVCHAPGVLRHVKAQDG
SPLVKGKNVTGFTNSEEEAVGLTEVVPFLVEDMLKANGANYSKAGDWQPYVVTDGLLITGQNPASSDPAANALLTMLKHR
GGGKG
>Mature_245_residues
MLTHTAHALRRPAMKVLIVLTSHDQLGNTGEKTGFWLEELAAPYYVLKDAGVNVTLASVKGGQPPLDPKSNDPSFQTTAT
RRFEDDADAKAALSSTQKLSDVSAGDYDAVFYPGGHGPMWDLAEDADSKALIEATFASGKPVALVCHAPGVLRHVKAQDG
SPLVKGKNVTGFTNSEEEAVGLTEVVPFLVEDMLKANGANYSKAGDWQPYVVTDGLLITGQNPASSDPAANALLTMLKHR
GGGKG

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=247, Percent_Identity=31.1740890688259, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324967, Length=227, Percent_Identity=28.6343612334802, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324975, Length=227, Percent_Identity=28.6343612334802, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323984, Length=227, Percent_Identity=28.1938325991189, Blast_Score=79, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25843; Mature: 25843

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHTAHALRRPAMKVLIVLTSHDQLGNTGEKTGFWLEELAAPYYVLKDAGVNVTLASVK
CCCCHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEEECC
GGQPPLDPKSNDPSFQTTATRRFEDDADAKAALSSTQKLSDVSAGDYDAVFYPGGHGPMW
CCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
DLAEDADSKALIEATFASGKPVALVCHAPGVLRHVKAQDGSPLVKGKNVTGFTNSEEEAV
CCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCEEECCCCCCCCCCCHHHC
GLTEVVPFLVEDMLKANGANYSKAGDWQPYVVTDGLLITGQNPASSDPAANALLTMLKHR
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHHHHC
GGGKG
CCCCC
>Mature Secondary Structure
MLTHTAHALRRPAMKVLIVLTSHDQLGNTGEKTGFWLEELAAPYYVLKDAGVNVTLASVK
CCCCHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEEEEECC
GGQPPLDPKSNDPSFQTTATRRFEDDADAKAALSSTQKLSDVSAGDYDAVFYPGGHGPMW
CCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
DLAEDADSKALIEATFASGKPVALVCHAPGVLRHVKAQDGSPLVKGKNVTGFTNSEEEAV
CCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHCCCCCCEEECCCCCCCCCCCHHHC
GLTEVVPFLVEDMLKANGANYSKAGDWQPYVVTDGLLITGQNPASSDPAANALLTMLKHR
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHHHHC
GGGKG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA