Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73539719
Identifier: 73539719
GI number: 73539719
Start: 17474
End: 19789
Strand: Direct
Name: 73539719
Synonym: Reut_A0013
Alternate gene names: NA
Gene position: 17474-19789 (Clockwise)
Preceding gene: 73539718
Following gene: 73539720
Centisome position: 0.46
GC content: 60.58
Gene sequence:
>2316_bases ATGGCGCAAGCAATCGACGGCAGCACGAACGCGGTGACAGGACGGCAGGCGTATTTCCTTGAAGTACCGAGCGCGCGCAG CGCCGCCGGGCTTTCTGTGGTGTCCTTCACGGCGGTGGAGAGGTTGGGCGAGCCCTACTGCGTCAAGGTGGCATTGACGC ATCCCTCGGAGCTGGCGCGTGCGGACTACCTGCGCAAGGACGCCACGTTCGTCATCGACCCGGGAGAGGATTCGGAACGC CGGACGTTCGGTGGCTGCATCATGCGGTTCTCCAAGACCAGGACGACGCGGGACTTCTGCGCCTACGAAATGGAGCTGCG GCCGAAGGTGGCCCTGCTGACGCTGGCAAAAGCCAGCCGCGTCTATCAGCACATGACCGCGCCGCAGATCATAGAAGCCA TCCTGCGTCGTCACGGCCTGGAAGGCCATCAGTTCGCATTCAAGATCCGACGGCAGTATCCCCAGCACAAGTTCCGGCTC CAGTACCAGATGTCGGATTGGGACTATATCCGCCTGCTGATGGTACAGGAGGGGCTGTACAGCTACTTCGTGCCGGGCAA GTTCGGGACGCAGTTTGGCGATCTGTTCACATTGGGCGATGACATCGACCACTACATCTACCAGCCCGAATTGCGCGTGC CCTATCGGGAGACGGCAGGTCTGGAATCAGGGCTGGAAACTGTGTTCGATCTCCAGACACACGTGGAGACCGTACCGGCC TCGTTCGTCACGGCCGATTACAACCCGGATCAGTCGTACGAGCGCTTCAGGGCCGAGGCCAACATCGCGCGCCAGGACAA GACCACGCATGGGCAGGCCTATGTCTACGGCACACACCATCTCGACATGGCAGGTGCCAAATGGGAAGCGCAACTGCGCC ACGAGGCCGCGCTGGCCGGGCAAGTCGTCTATGAAGGCCAGAGCAACATCCTGGATCTGCGTCCGGCGCGGATTCTGCGG ATGGATGTGGATCTGCCTGATGCGCCGAACGGGCAAGTCATTACTGAAGTTATCCACAGCGGTGGGCGTGACAAGGCCTA CCGAAATACCTACAAGGCCATTCCGTCGGATCGTCGCTACCGGTTGCCGATTGACGAGAACAAGTGGCCGCGCATCGCCG GCACGCTGAGCGGGCGGGTCACTTCACCACAGAACTACAAGTACGCCTACCTGACGCAGCAGGGTCACTACGTGGTCCGC CTGGACCTCGATTTCGACGAGTGGCCGAAGGGCGCGGAGAGTGTCCCGCTGCGGCTGGCCAAGCCTTTCGCAGGGGCACG ACAGACTGGGTTCCACTTTCCGCTGATTGACGGTACCGAAGTGGCCGTCGCATTTCGGGATGGCGATCCGAACAAGCCCT ATATCGCTCACGCGCTTCATCACAGTCAGCATGAAGACCTGATAACGACCAAGGATCGCTGGCTGTCGCGCAACGTCATC CGGACGCAGAGCAACAACAAGTTGCGGATGGAGGATTGGGAGGGGCAGGAGAGTATCAAGCTGTCGACGGAGTATGGGGG GAAGACGCAGCTGAACCTGGGTTATCTGGTTGATCGAAAGCGCCAGAAGCGGGGGGATGGTTTTGAGTTGAGGACGTCGG GGTATGGGGCGCTGCGTGGGGGGAAGGGGCTGTTTATCACCGCATACGACCAACGACTTGCATCCGGGCAGCAACTCGAT ATGCAGGAAACGATCGCGGAACTCGAGCGCGCGTTGAACCTTGCCAGATCACTTGCCGCCTCGACCCGCCAGACCAGAGC TGAACCGGCTGATATCGATGCGCAGCAGCAGGCGATTCGTGAGCTGAACAAGCTGGGTGCAGCGGGCTCGTTGATCAGTG CTCCGGCGTCGATTGCCCTTGCATCCGAGCGCAACATTCAACTAGCTGCCGGGAGGAACGTCTCGACCGTGGCTGGCGAG AGCGCTGACATCAGCGCGCTTAAGCGCATCACCATGGCGGCAGGGGATTTGATTTCGCTGTGTGCTCACAGACTCGGCAT CAAGCTCTTCGCGGCCAAGGGCATGGTCGAAATCCAGGCCCAAAACGACGGGCTGAACCTGTATGCAGACAAGCAACTGC ATATTGCAAGTGCCAATGCGGATGTGCTGGTCAACGCCAAGCTGAAGGCCGTGCTGGCTGCTGCGGGAGGCAGCGTGACG ATGGAGAAAGGCGGAGTGGTGATCAAGTGTCCAGGCGACTTCAGGATCGAGGCGGCGTCCTTCACGTTCGTTGGTCCGGG TGGTCAGACGCTACCCCTGCCTGCGCTTCCAAAAAGCGACCTGAAGATTGACGGCCGGTACCCTTCCTCGCACTGA
Upstream 100 bases:
>100_bases TTTTTCGAATTCGCCCTATATCCGCCGCTAGTCACGCTTGTAATCATCTTTGCGCCGGGCGCATAGCGCCCAACCCAGCA CGACTCCCTCGGGATCCACC
Downstream 100 bases:
>100_bases GGCAGTCAAAAGCATGCAAATGTTGGGGAGATTCTTCCTCTGCTTTGTTACCGCATTGAAATGTCAGTATTCATCGGCTC ATGAGAAAAGAGAGTTTAAT
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs Element Vgr Family Protein; VGR-Related Protein; Rhs Accessory Genetic Element; Rhs Family Protein; Vgr-Related Protein; VGR-Like Protein; Rhs-Family Protein; Replication/Virulence Associated Protein; Type VI Secretion System Rhs Element Vgr Protein; Rhs Element Protein VgrG-Like; Rhs Element Protein VgrE; VGR-Related Type VI Secretion System Protein; Vgr Family Type VI Secretion System; Vgr Related Protein; Rhs Element Vgr ProteinGp5-Like; VrgG Protein
Number of amino acids: Translated: 771; Mature: 770
Protein sequence:
>771_residues MAQAIDGSTNAVTGRQAYFLEVPSARSAAGLSVVSFTAVERLGEPYCVKVALTHPSELARADYLRKDATFVIDPGEDSER RTFGGCIMRFSKTRTTRDFCAYEMELRPKVALLTLAKASRVYQHMTAPQIIEAILRRHGLEGHQFAFKIRRQYPQHKFRL QYQMSDWDYIRLLMVQEGLYSYFVPGKFGTQFGDLFTLGDDIDHYIYQPELRVPYRETAGLESGLETVFDLQTHVETVPA SFVTADYNPDQSYERFRAEANIARQDKTTHGQAYVYGTHHLDMAGAKWEAQLRHEAALAGQVVYEGQSNILDLRPARILR MDVDLPDAPNGQVITEVIHSGGRDKAYRNTYKAIPSDRRYRLPIDENKWPRIAGTLSGRVTSPQNYKYAYLTQQGHYVVR LDLDFDEWPKGAESVPLRLAKPFAGARQTGFHFPLIDGTEVAVAFRDGDPNKPYIAHALHHSQHEDLITTKDRWLSRNVI RTQSNNKLRMEDWEGQESIKLSTEYGGKTQLNLGYLVDRKRQKRGDGFELRTSGYGALRGGKGLFITAYDQRLASGQQLD MQETIAELERALNLARSLAASTRQTRAEPADIDAQQQAIRELNKLGAAGSLISAPASIALASERNIQLAAGRNVSTVAGE SADISALKRITMAAGDLISLCAHRLGIKLFAAKGMVEIQAQNDGLNLYADKQLHIASANADVLVNAKLKAVLAAAGGSVT MEKGGVVIKCPGDFRIEAASFTFVGPGGQTLPLPALPKSDLKIDGRYPSSH
Sequences:
>Translated_771_residues MAQAIDGSTNAVTGRQAYFLEVPSARSAAGLSVVSFTAVERLGEPYCVKVALTHPSELARADYLRKDATFVIDPGEDSER RTFGGCIMRFSKTRTTRDFCAYEMELRPKVALLTLAKASRVYQHMTAPQIIEAILRRHGLEGHQFAFKIRRQYPQHKFRL QYQMSDWDYIRLLMVQEGLYSYFVPGKFGTQFGDLFTLGDDIDHYIYQPELRVPYRETAGLESGLETVFDLQTHVETVPA SFVTADYNPDQSYERFRAEANIARQDKTTHGQAYVYGTHHLDMAGAKWEAQLRHEAALAGQVVYEGQSNILDLRPARILR MDVDLPDAPNGQVITEVIHSGGRDKAYRNTYKAIPSDRRYRLPIDENKWPRIAGTLSGRVTSPQNYKYAYLTQQGHYVVR LDLDFDEWPKGAESVPLRLAKPFAGARQTGFHFPLIDGTEVAVAFRDGDPNKPYIAHALHHSQHEDLITTKDRWLSRNVI RTQSNNKLRMEDWEGQESIKLSTEYGGKTQLNLGYLVDRKRQKRGDGFELRTSGYGALRGGKGLFITAYDQRLASGQQLD MQETIAELERALNLARSLAASTRQTRAEPADIDAQQQAIRELNKLGAAGSLISAPASIALASERNIQLAAGRNVSTVAGE SADISALKRITMAAGDLISLCAHRLGIKLFAAKGMVEIQAQNDGLNLYADKQLHIASANADVLVNAKLKAVLAAAGGSVT MEKGGVVIKCPGDFRIEAASFTFVGPGGQTLPLPALPKSDLKIDGRYPSSH >Mature_770_residues AQAIDGSTNAVTGRQAYFLEVPSARSAAGLSVVSFTAVERLGEPYCVKVALTHPSELARADYLRKDATFVIDPGEDSERR TFGGCIMRFSKTRTTRDFCAYEMELRPKVALLTLAKASRVYQHMTAPQIIEAILRRHGLEGHQFAFKIRRQYPQHKFRLQ YQMSDWDYIRLLMVQEGLYSYFVPGKFGTQFGDLFTLGDDIDHYIYQPELRVPYRETAGLESGLETVFDLQTHVETVPAS FVTADYNPDQSYERFRAEANIARQDKTTHGQAYVYGTHHLDMAGAKWEAQLRHEAALAGQVVYEGQSNILDLRPARILRM DVDLPDAPNGQVITEVIHSGGRDKAYRNTYKAIPSDRRYRLPIDENKWPRIAGTLSGRVTSPQNYKYAYLTQQGHYVVRL DLDFDEWPKGAESVPLRLAKPFAGARQTGFHFPLIDGTEVAVAFRDGDPNKPYIAHALHHSQHEDLITTKDRWLSRNVIR TQSNNKLRMEDWEGQESIKLSTEYGGKTQLNLGYLVDRKRQKRGDGFELRTSGYGALRGGKGLFITAYDQRLASGQQLDM QETIAELERALNLARSLAASTRQTRAEPADIDAQQQAIRELNKLGAAGSLISAPASIALASERNIQLAAGRNVSTVAGES ADISALKRITMAAGDLISLCAHRLGIKLFAAKGMVEIQAQNDGLNLYADKQLHIASANADVLVNAKLKAVLAAAGGSVTM EKGGVVIKCPGDFRIEAASFTFVGPGGQTLPLPALPKSDLKIDGRYPSSH
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85556; Mature: 85425
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAIDGSTNAVTGRQAYFLEVPSARSAAGLSVVSFTAVERLGEPYCVKVALTHPSELAR CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHH ADYLRKDATFVIDPGEDSERRTFGGCIMRFSKTRTTRDFCAYEMELRPKVALLTLAKASR HHHHHCCCEEEECCCCCCCCHHHHHHHEEHHCCCCCHHHHEEEEECCCCEEEEEHHHHHH VYQHMTAPQIIEAILRRHGLEGHQFAFKIRRQYPQHKFRLQYQMSDWDYIRLLMVQEGLY HHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEHHHCHH SYFVPGKFGTQFGDLFTLGDDIDHYIYQPELRVPYRETAGLESGLETVFDLQTHVETVPA HEECCCCCCCCCCCEEEECCCCCCEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCC SFVTADYNPDQSYERFRAEANIARQDKTTHGQAYVYGTHHLDMAGAKWEAQLRHEAALAG EEEEECCCCCHHHHHHHHHCCHHHCCCCCCCCEEEEEECEEECCCCCHHHHHHHHHHHHC QVVYEGQSNILDLRPARILRMDVDLPDAPNGQVITEVIHSGGRDKAYRNTYKAIPSDRRY EEEECCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCEE RLPIDENKWPRIAGTLSGRVTSPQNYKYAYLTQQGHYVVRLDLDFDEWPKGAESVPLRLA ECCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCHHHCCCCCCCCCEEEE KPFAGARQTGFHFPLIDGTEVAVAFRDGDPNKPYIAHALHHSQHEDLITTKDRWLSRNVI CCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCEEHHHHCCCCCCCCCCHHHHHHCCCE RTQSNNKLRMEDWEGQESIKLSTEYGGKTQLNLGYLVDRKRQKRGDGFELRTSGYGALRG EECCCCEEEEECCCCCCEEEEEECCCCEEEEEEHHEECCHHHHCCCCEEEEECCCEEEEC GKGLFITAYDQRLASGQQLDMQETIAELERALNLARSLAASTRQTRAEPADIDAQQQAIR CCEEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ELNKLGAAGSLISAPASIALASERNIQLAAGRNVSTVAGESADISALKRITMAAGDLISL HHHHCCCCCCHHCCCCEEEEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHH CAHRLGIKLFAAKGMVEIQAQNDGLNLYADKQLHIASANADVLVNAKLKAVLAAAGGSVT HHHHHCEEEEEECCEEEEEECCCCEEEEECCEEEEEECCCCEEEECEEEEEEEECCCCEE MEKGGVVIKCPGDFRIEAASFTFVGPGGQTLPLPALPKSDLKIDGRYPSSH EECCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure AQAIDGSTNAVTGRQAYFLEVPSARSAAGLSVVSFTAVERLGEPYCVKVALTHPSELAR CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHH ADYLRKDATFVIDPGEDSERRTFGGCIMRFSKTRTTRDFCAYEMELRPKVALLTLAKASR HHHHHCCCEEEECCCCCCCCHHHHHHHEEHHCCCCCHHHHEEEEECCCCEEEEEHHHHHH VYQHMTAPQIIEAILRRHGLEGHQFAFKIRRQYPQHKFRLQYQMSDWDYIRLLMVQEGLY HHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEHHHCHH SYFVPGKFGTQFGDLFTLGDDIDHYIYQPELRVPYRETAGLESGLETVFDLQTHVETVPA HEECCCCCCCCCCCEEEECCCCCCEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCC SFVTADYNPDQSYERFRAEANIARQDKTTHGQAYVYGTHHLDMAGAKWEAQLRHEAALAG EEEEECCCCCHHHHHHHHHCCHHHCCCCCCCCEEEEEECEEECCCCCHHHHHHHHHHHHC QVVYEGQSNILDLRPARILRMDVDLPDAPNGQVITEVIHSGGRDKAYRNTYKAIPSDRRY EEEECCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCEE RLPIDENKWPRIAGTLSGRVTSPQNYKYAYLTQQGHYVVRLDLDFDEWPKGAESVPLRLA ECCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCHHHCCCCCCCCCEEEE KPFAGARQTGFHFPLIDGTEVAVAFRDGDPNKPYIAHALHHSQHEDLITTKDRWLSRNVI CCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCEEHHHHCCCCCCCCCCHHHHHHCCCE RTQSNNKLRMEDWEGQESIKLSTEYGGKTQLNLGYLVDRKRQKRGDGFELRTSGYGALRG EECCCCEEEEECCCCCCEEEEEECCCCEEEEEEHHEECCHHHHCCCCEEEEECCCEEEEC GKGLFITAYDQRLASGQQLDMQETIAELERALNLARSLAASTRQTRAEPADIDAQQQAIR CCEEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ELNKLGAAGSLISAPASIALASERNIQLAAGRNVSTVAGESADISALKRITMAAGDLISL HHHHCCCCCCHHCCCCEEEEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHH CAHRLGIKLFAAKGMVEIQAQNDGLNLYADKQLHIASANADVLVNAKLKAVLAAAGGSVT HHHHHCEEEEEECCEEEEEECCCCEEEEECCEEEEEECCCCEEEECEEEEEEEECCCCEE MEKGGVVIKCPGDFRIEAASFTFVGPGGQTLPLPALPKSDLKIDGRYPSSH EECCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA