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The map label for this gene is yqaK [H]

Identifier: 71911017

GI number: 71911017

Start: 1169334

End: 1170263

Strand: Reverse

Name: yqaK [H]

Synonym: M5005_Spy_1204

Alternate gene names: 71911017

Gene position: 1170263-1169334 (Counterclockwise)

Preceding gene: 71911018

Following gene: 71911016

Centisome position: 63.65

GC content: 38.17

Gene sequence:

>930_bases
ATGGCAAATCAATTATCAACATACACACACAAACAATTTTTTAACGCACCAACAATTCAAAAAGCTTTTGATGACGTTTG
GAAAGGCGCCGGGACACAGTTCGCAGTAAGCATCTTGTCAGTACTACAAGGTAGTCAAAGTTTGAAATCGGCATCTAATG
AATCTATTTATGCAGCAGCTATGAAAGCAGCCGTGTTAAATCTGCCTATTGAGCCAAGCTTAGGAAGGGCCTATTTAGTT
CCGTACAAAGGTCAAGCACAATTCCAATTAGGCTATAAAGGGTTGATTGAGTTAGCTCAGCGCAGCGGACAATACAAAAA
TATTAATGCAGGTATCGTCTATAAATCACAATTAATTTCTTACAACCCTTTGTTCGAGGAATTAATCCTTGACTTTAGCA
AGCCACAAGATGAAATTGTAGGGTATTTTGCCGCTTTTAAACTTTTAAATGGATTCGAGAAAGTTTCTTTTTGGACAGTA
GAAAAAGTAACTGCACATGGAAAGAAATTTTCAAAATCGTTTGCTAGCGGTCCTTGGAAAACAGACTTTGATGCAATGGC
TCAAAAAACTATTTTAAAAGATATTTTGAGTAAATATGGTCCGTTATCAGTTGAGATGCAGAAAGCTATCGAGGAAGATA
ATCAAGATTCAACGATTTCTACCCCAAAAGACATTACCCCACAAGAAGCAAATAGCCTTGACGACCTAATTGGTCACCAG
AACGAAAATAAGGATGCTCCTAACAATTTAAAAGACGTAACTGAAGATTTACATGACGAAGAAGAAAAAACGCTCGCAGA
CGAAAATAAGACGGCTTTAGAAGATACGTCTTATCCGGCTGATGAAATCCCTGATTTCGACCAAGAGACAGGCGAAATTA
AAGCTAGCGAAGGCAACCTCTTTGATAACCTTGGGGACTTAATGCCATGA

Upstream 100 bases:

>100_bases
AATTTATTGATGGCGAGGATGTTCCAGAGTTAACAAAAGAGCAAAAAGTTAAAAGTATGGTAAACGGAATGTTTGAGCAG
GTTTTTGGAGGTGAATAGAG

Downstream 100 bases:

>100_bases
CGAAGTTAGACTTGCTCGGAAAGGACTATTATAGCCGTGAATCAGCGATTAAATACTGGTCCATTAGTCAGTACAAGCGT
TTTAGAGAGTGCGAGGCAAG

Product: recT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MANQLSTYTHKQFFNAPTIQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNESIYAAAMKAAVLNLPIEPSLGRAYLV
PYKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLISYNPLFEELILDFSKPQDEIVGYFAAFKLLNGFEKVSFWTV
EKVTAHGKKFSKSFASGPWKTDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISTPKDITPQEANSLDDLIGHQ
NENKDAPNNLKDVTEDLHDEEEKTLADENKTALEDTSYPADEIPDFDQETGEIKASEGNLFDNLGDLMP

Sequences:

>Translated_309_residues
MANQLSTYTHKQFFNAPTIQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNESIYAAAMKAAVLNLPIEPSLGRAYLV
PYKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLISYNPLFEELILDFSKPQDEIVGYFAAFKLLNGFEKVSFWTV
EKVTAHGKKFSKSFASGPWKTDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISTPKDITPQEANSLDDLIGHQ
NENKDAPNNLKDVTEDLHDEEEKTLADENKTALEDTSYPADEIPDFDQETGEIKASEGNLFDNLGDLMP
>Mature_308_residues
ANQLSTYTHKQFFNAPTIQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNESIYAAAMKAAVLNLPIEPSLGRAYLVP
YKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLISYNPLFEELILDFSKPQDEIVGYFAAFKLLNGFEKVSFWTVE
KVTAHGKKFSKSFASGPWKTDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISTPKDITPQEANSLDDLIGHQN
ENKDAPNNLKDVTEDLHDEEEKTLADENKTALEDTSYPADEIPDFDQETGEIKASEGNLFDNLGDLMP

Specific function: Binds To Single-Stranded DNA And Also Promotes The Renaturation Of Complementary Single-Stranded DNA. Function In Recombination. Has A Function Similar To That Of Lambda Redb. [C]

COG id: COG3723

COG function: function code L; Recombinational DNA repair protein (RecE pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787611, Length=191, Percent_Identity=30.8900523560209, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004590
- InterPro:   IPR018330 [H]

Pfam domain/function: PF03837 RecT [H]

EC number: NA

Molecular weight: Translated: 34288; Mature: 34156

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQLSTYTHKQFFNAPTIQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNESIYAAA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCHHHHHH
MKAAVLNLPIEPSLGRAYLVPYKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLIS
HHHHHHCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHC
YNPLFEELILDFSKPQDEIVGYFAAFKLLNGFEKVSFWTVEKVTAHGKKFSKSFASGPWK
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISTPKDITPQEANSLDDLIGHQ
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
NENKDAPNNLKDVTEDLHDEEEKTLADENKTALEDTSYPADEIPDFDQETGEIKASEGNL
CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHCCCCCCHHHCCCCCCCCCCEECCCCCH
FDNLGDLMP
HHHHHHCCC
>Mature Secondary Structure 
ANQLSTYTHKQFFNAPTIQKAFDDVWKGAGTQFAVSILSVLQGSQSLKSASNESIYAAA
CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCHHHHHH
MKAAVLNLPIEPSLGRAYLVPYKGQAQFQLGYKGLIELAQRSGQYKNINAGIVYKSQLIS
HHHHHHCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHC
YNPLFEELILDFSKPQDEIVGYFAAFKLLNGFEKVSFWTVEKVTAHGKKFSKSFASGPWK
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISTPKDITPQEANSLDDLIGHQ
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
NENKDAPNNLKDVTEDLHDEEEKTLADENKTALEDTSYPADEIPDFDQETGEIKASEGNL
CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHCCCCCCHHHCCCCCCCCCCEECCCCCH
FDNLGDLMP
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]