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The map label for this gene is xtmB [H]

Identifier: 71910836

GI number: 71910836

Start: 1005273

End: 1006547

Strand: Reverse

Name: xtmB [H]

Synonym: M5005_Spy_1023

Alternate gene names: 71910836

Gene position: 1006547-1005273 (Counterclockwise)

Preceding gene: 71910837

Following gene: 71910835

Centisome position: 54.75

GC content: 39.76

Gene sequence:

>1275_bases
ATGGTAGTTGATTTAGCTGATATTATCCCAATTGGTTTTAAGCCTGTCGTGCAAGCGACTTGGAATCCTCAAATACTAAA
TATCGCTTGCAAAGGCGGACGTGGTTCTGGTAAATCATCTAATATTGCTTTTATTATCTCGAGGTTAATAATACAGTATC
CTGTCAATGCGGTTTGTATCCGTAAAACAGATAATACTCTGGAGCAGTCTGTTTATGAGCAAATTAAATGGGCTATATCT
GAGCAAGGGCTAGAGCGTTACTTTAAATTTAACAAATCACCTCTAAGGATAACGTACATCCCTAGAGGTAATTACATTGT
CTTTAGAGGAGCACAAAATCCTGAACGTATCAAGTCCTTAAAAGATAGTCGTTTTCCTTTTGCTATCGGTTGGATCGAGG
AGCTTGCGGAATTTAAAACCGAGGACGAAGTCAAAACTATCACTAACTCCCTATTGCGTGGGGAACTCGGTGATGGTCTT
TTTTATAAATTTTTTTATACATACAATCCACCTAAACGTAAACAGTCTTGGGTTAACAAAAAATATGAGAGCCAATTTCA
GCCGTCTAATACGTTTGTACACGCATCTACGTATAAAGATAATCCTTTTATTGCCAAAGAGTTTATAGCCGAGGCAGAAG
CCACGAGAGAGCGTTCAGAACGTCGTTATCGTTGGGAGTATTTAGGAGAGGCCATTGGTTCGGGTGTTGTTCCATTTGAC
AACTTACGCTTCGAACGTATTACTGACGAACAAGTAGCCGATTTCGATAATATCCGTAACGGTATTGACTATGGTTATGC
AACTGACCCGCTTGCTTTTGTACGTTGGCATTATGATAAAAAGAAAAATGGTATCTATGCTATTGACGAGTATTATGGTC
AGAAGATATCAAACAGGCAGCTGGCTAAGTGGTTGACGACTAAAGGATATCAGAGTGATGAGATGTTTGCTGAAAGTGCT
GAGCCTAAAAGTAATGCTGAGCTTAAAAACGAGTTTGGCATCAAACGGATAAAAGGCGTTAAAAAAGGACCAGATTCTGT
CGAGTTTGGGGAGCGCTGGTTAGATGACTTAGATTTTATCTGTATAGACCCAAAACGGACACCAAATATCGCTCGAGAGT
TTGAAAATATCGACTATCAAGTCGATAGAGATGGCAACCCTAAACCTCGTTTAGAAGACAAGGATAACCATGCGATAGAT
GCGACAAGGTATGCTATGTCAGACGACATGAGAGCGACTAAAACCATCGTCAAAACATTTAAAGGAGGTATCTAG

Upstream 100 bases:

>100_bases
TCTCAAGATATCCTTGACCGAGCAGGTTATAAACCGACAGACAAGCAGGAAATCAGCATAGACGAGCCTATCGTACTTGC
TAATTCATGGGTGCAAGACA

Downstream 100 bases:

>100_bases
TGCCAGAATTATTTATTGTGCCATCAGATACAGAGATGACAAAAGATTTGTTAAGCGAGTTAATCCAAAAACACAGGTCG
TTTAACCTTAGTTATTCAGC

Product: terminase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MVVDLADIIPIGFKPVVQATWNPQILNIACKGGRGSGKSSNIAFIISRLIIQYPVNAVCIRKTDNTLEQSVYEQIKWAIS
EQGLERYFKFNKSPLRITYIPRGNYIVFRGAQNPERIKSLKDSRFPFAIGWIEELAEFKTEDEVKTITNSLLRGELGDGL
FYKFFYTYNPPKRKQSWVNKKYESQFQPSNTFVHASTYKDNPFIAKEFIAEAEATRERSERRYRWEYLGEAIGSGVVPFD
NLRFERITDEQVADFDNIRNGIDYGYATDPLAFVRWHYDKKKNGIYAIDEYYGQKISNRQLAKWLTTKGYQSDEMFAESA
EPKSNAELKNEFGIKRIKGVKKGPDSVEFGERWLDDLDFICIDPKRTPNIAREFENIDYQVDRDGNPKPRLEDKDNHAID
ATRYAMSDDMRATKTIVKTFKGGI

Sequences:

>Translated_424_residues
MVVDLADIIPIGFKPVVQATWNPQILNIACKGGRGSGKSSNIAFIISRLIIQYPVNAVCIRKTDNTLEQSVYEQIKWAIS
EQGLERYFKFNKSPLRITYIPRGNYIVFRGAQNPERIKSLKDSRFPFAIGWIEELAEFKTEDEVKTITNSLLRGELGDGL
FYKFFYTYNPPKRKQSWVNKKYESQFQPSNTFVHASTYKDNPFIAKEFIAEAEATRERSERRYRWEYLGEAIGSGVVPFD
NLRFERITDEQVADFDNIRNGIDYGYATDPLAFVRWHYDKKKNGIYAIDEYYGQKISNRQLAKWLTTKGYQSDEMFAESA
EPKSNAELKNEFGIKRIKGVKKGPDSVEFGERWLDDLDFICIDPKRTPNIAREFENIDYQVDRDGNPKPRLEDKDNHAID
ATRYAMSDDMRATKTIVKTFKGGI
>Mature_424_residues
MVVDLADIIPIGFKPVVQATWNPQILNIACKGGRGSGKSSNIAFIISRLIIQYPVNAVCIRKTDNTLEQSVYEQIKWAIS
EQGLERYFKFNKSPLRITYIPRGNYIVFRGAQNPERIKSLKDSRFPFAIGWIEELAEFKTEDEVKTITNSLLRGELGDGL
FYKFFYTYNPPKRKQSWVNKKYESQFQPSNTFVHASTYKDNPFIAKEFIAEAEATRERSERRYRWEYLGEAIGSGVVPFD
NLRFERITDEQVADFDNIRNGIDYGYATDPLAFVRWHYDKKKNGIYAIDEYYGQKISNRQLAKWLTTKGYQSDEMFAESA
EPKSNAELKNEFGIKRIKGVKKGPDSVEFGERWLDDLDFICIDPKRTPNIAREFENIDYQVDRDGNPKPRLEDKDNHAID
ATRYAMSDDMRATKTIVKTFKGGI

Specific function: Functions as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaT and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 49104; Mature: 49104

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVDLADIIPIGFKPVVQATWNPQILNIACKGGRGSGKSSNIAFIISRLIIQYPVNAVCI
CEECCHHHCCCCCCHHEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEE
RKTDNTLEQSVYEQIKWAISEQGLERYFKFNKSPLRITYIPRGNYIVFRGAQNPERIKSL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCHHHHHHH
KDSRFPFAIGWIEELAEFKTEDEVKTITNSLLRGELGDGLFYKFFYTYNPPKRKQSWVNK
HCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHH
KYESQFQPSNTFVHASTYKDNPFIAKEFIAEAEATRERSERRYRWEYLGEAIGSGVVPFD
HHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NLRFERITDEQVADFDNIRNGIDYGYATDPLAFVRWHYDKKKNGIYAIDEYYGQKISNRQ
CCEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCCCCCHH
LAKWLTTKGYQSDEMFAESAEPKSNAELKNEFGIKRIKGVKKGPDSVEFGERWLDDLDFI
HHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHCHHHHHCCCCCCCCHHHHHHHHCCCCEE
CIDPKRTPNIAREFENIDYQVDRDGNPKPRLEDKDNHAIDATRYAMSDDMRATKTIVKTF
EECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
KGGI
CCCC
>Mature Secondary Structure
MVVDLADIIPIGFKPVVQATWNPQILNIACKGGRGSGKSSNIAFIISRLIIQYPVNAVCI
CEECCHHHCCCCCCHHEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEE
RKTDNTLEQSVYEQIKWAISEQGLERYFKFNKSPLRITYIPRGNYIVFRGAQNPERIKSL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCHHHHHHH
KDSRFPFAIGWIEELAEFKTEDEVKTITNSLLRGELGDGLFYKFFYTYNPPKRKQSWVNK
HCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHH
KYESQFQPSNTFVHASTYKDNPFIAKEFIAEAEATRERSERRYRWEYLGEAIGSGVVPFD
HHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NLRFERITDEQVADFDNIRNGIDYGYATDPLAFVRWHYDKKKNGIYAIDEYYGQKISNRQ
CCEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCCCCCHH
LAKWLTTKGYQSDEMFAESAEPKSNAELKNEFGIKRIKGVKKGPDSVEFGERWLDDLDFI
HHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHCHHHHHCCCCCCCCHHHHHHHHCCCCEE
CIDPKRTPNIAREFENIDYQVDRDGNPKPRLEDKDNHAIDATRYAMSDDMRATKTIVKTF
EECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
KGGI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 8083174 [H]