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The map label for this gene is yfnB [H]

Identifier: 71910602

GI number: 71910602

Start: 792783

End: 793472

Strand: Direct

Name: yfnB [H]

Synonym: M5005_Spy_0789

Alternate gene names: 71910602

Gene position: 792783-793472 (Clockwise)

Preceding gene: 71910601

Following gene: 71910603

Centisome position: 43.12

GC content: 42.03

Gene sequence:

>690_bases
GTGCATTACAACTTTCTTTTTTTCGACCTTGACCATACCCTACTTGATTTTGATGCGGCAGAAGAGGTTGCTTTGACCAA
GTTGCTAGAAGAGTACCAGGTTATTGATATTAAGGCTTACAAGGACTACTATAAGCCGATGAATCAGAACTTATGGAAAC
AGTTAGAAGGTGGGGATATTAGTAAAGCTGATTTGGTTAACTCTCGCTTTGCTCTGCTATTTGCTCATTTTGGAGTGACG
GTTGATGGCAGGCAGTTAGCAGAAGGTTATCAAAAGCATTTAAAAGATCAAGGGCAAGTTTATGCTGGTGCTAAGGAGCT
GTTAGCGGACTTAACTGCCCAAGGCTATAATCTTTATGCGGCAACTAATGGCATCGCAACGATTCAACAAGGCCGATTGC
AAGCGTCTGGTTTGGCACCTTACTTCAAAGCCATTTTCATTTCGGAACAGTCGGGTAGTCAAAAACCTAAAAAAGCTTTC
TATGATTGGATGACCCAGCAGGTTTCCAATTACCAACCTGATCAAGCTTTGATGATTGGTGATAGTTTATCGGCTGATGT
TCAAGGTGGAATTAATGCTGGCATGGATACCTTATGGTACAACCCAAAGCATCTCCTGAATAACAGCCCTGTTCATCCTA
CCTATGAGGTGTCAGATTATCAAGCTCTGCTGAATTGTATTGCGGAGTAA

Upstream 100 bases:

>100_bases
ATCAGTTGTTACCCATGATATTCCAGTCAATTCCCTTGCGGCAGGTGTTCCTTGCCAAGTTGTACGGAAAATTGAGCAGG
AGTAGAAAGTGAGGCAAAAA

Downstream 100 bases:

>100_bases
CAGACAATAGCCTTTAAAAATAGCGTAGTCATTTTTTGAAATCGATTTCATAATCTGGTAGACTAAGGTTATCACGAAAA
GGAGGCTATATGTGATGGCT

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MHYNFLFFDLDHTLLDFDAAEEVALTKLLEEYQVIDIKAYKDYYKPMNQNLWKQLEGGDISKADLVNSRFALLFAHFGVT
VDGRQLAEGYQKHLKDQGQVYAGAKELLADLTAQGYNLYAATNGIATIQQGRLQASGLAPYFKAIFISEQSGSQKPKKAF
YDWMTQQVSNYQPDQALMIGDSLSADVQGGINAGMDTLWYNPKHLLNNSPVHPTYEVSDYQALLNCIAE

Sequences:

>Translated_229_residues
MHYNFLFFDLDHTLLDFDAAEEVALTKLLEEYQVIDIKAYKDYYKPMNQNLWKQLEGGDISKADLVNSRFALLFAHFGVT
VDGRQLAEGYQKHLKDQGQVYAGAKELLADLTAQGYNLYAATNGIATIQQGRLQASGLAPYFKAIFISEQSGSQKPKKAF
YDWMTQQVSNYQPDQALMIGDSLSADVQGGINAGMDTLWYNPKHLLNNSPVHPTYEVSDYQALLNCIAE
>Mature_229_residues
MHYNFLFFDLDHTLLDFDAAEEVALTKLLEEYQVIDIKAYKDYYKPMNQNLWKQLEGGDISKADLVNSRFALLFAHFGVT
VDGRQLAEGYQKHLKDQGQVYAGAKELLADLTAQGYNLYAATNGIATIQQGRLQASGLAPYFKAIFISEQSGSQKPKKAF
YDWMTQQVSNYQPDQALMIGDSLSADVQGGINAGMDTLWYNPKHLLNNSPVHPTYEVSDYQALLNCIAE

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

Organism=Homo sapiens, GI23308749, Length=239, Percent_Identity=28.4518828451883, Blast_Score=75, Evalue=6e-14,
Organism=Escherichia coli, GI1790833, Length=223, Percent_Identity=30.9417040358744, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25737; Mature: 25737

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYNFLFFDLDHTLLDFDAAEEVALTKLLEEYQVIDIKAYKDYYKPMNQNLWKQLEGGDI
CCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHCHHHHHHHHHCCCCCC
SKADLVNSRFALLFAHFGVTVDGRQLAEGYQKHLKDQGQVYAGAKELLADLTAQGYNLYA
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHCCCEEEE
ATNGIATIQQGRLQASGLAPYFKAIFISEQSGSQKPKKAFYDWMTQQVSNYQPDQALMIG
ECCCCHHHHHCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEC
DSLSADVQGGINAGMDTLWYNPKHLLNNSPVHPTYEVSDYQALLNCIAE
CCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure
MHYNFLFFDLDHTLLDFDAAEEVALTKLLEEYQVIDIKAYKDYYKPMNQNLWKQLEGGDI
CCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHCHHHHHHHHHCCCCCC
SKADLVNSRFALLFAHFGVTVDGRQLAEGYQKHLKDQGQVYAGAKELLADLTAQGYNLYA
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHCCCEEEE
ATNGIATIQQGRLQASGLAPYFKAIFISEQSGSQKPKKAFYDWMTQQVSNYQPDQALMIG
ECCCCHHHHHCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEC
DSLSADVQGGINAGMDTLWYNPKHLLNNSPVHPTYEVSDYQALLNCIAE
CCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]