Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893595
Identifier: 71893595
GI number: 71893595
Start: 284636
End: 287272
Strand: Reverse
Name: 71893595
Synonym: MHJ_0239
Alternate gene names: NA
Gene position: 287272-284636 (Counterclockwise)
Preceding gene: 71893596
Following gene: 71893594
Centisome position: 32.01
GC content: 29.43
Gene sequence:
>2637_bases TTACAGAATAAACGAATCAAAAATGTCCAAATTCAAATTTTTCGAAAAATCACTTTAATTGACTTACCAATCATTATGAT TATGTTTTTTATTTCAGCTAGCATCAGTTTTGCTTTGCCAGAAGACATTTTTATTTTATGAAAAATTTTAATTTCTGCCT CTTTATTCTTTATTTTTACAGTTCCGTTAATAAAACACTATAAAAATTGAGGTCTTAAGGGTTATAAAATTCTTTGATAT ATAATTTTATACACTTCGCGGCCAAAAATTTATACAAAAACTTCAAAAACTAGTGCAAATACCGGAAATTTATTACCATA TACGCGTGCAAAACAGGATTTTATCAAAGTTGGTGGCGGGTTTGTAGGAGGGATTGAGATTAATGGTCAGGATATTTTCA GTATTGGAACTGAAAAAATTGAACAGATTCTCCAGCAACTAACTGTCAGTCTTAATGCAATAAGCAATCGAATTTCAATT GTAAAAATTGCTCATCCTAATGATTTAACAAAAAATAAACTATTTTTTCTACGGTATCAAGATGAATGTCTTGAAAATTT AGGAGAAAATTTATGCTTGGAATATAAAAATGACATTGCTAATTTTGATACATATTTACATCACCGCTATTTTATTATTG TCTATGAAAAAAATGATGTTTCCTTGTTGCAACAGGTAAGTCTTCTGCGTGCAAATATTTCTTCGACTGGATTTCGTGCA CGAATTGCACCATTGCGTGATCTACTTGATTTAAATTTAAAAATTATTAATTTTAACGACTTTTTAAATGATGAAGAATT TAATAACATCAGAAATGGCGATGATATTAGCAAATATTTAGCTCAAAATAAAATTGAATGATACCCAGAAAATTTTAAGA TTAATGATATTTATTTTTCAGTTCAAAGTATCAATGAATATCCATTTAATTTACCGCTTGGCTGAGCGGCCCAACTTTTT TCGACAAACAGTAGCGTTGTTTGGCATCTAAATCGCCTAACTGCCACCGAAAAAGAAAATAGTTTTAATAAAGGGGCAAA AAATTTAGAATCAAACCTTAATGACCAAAAAAATGTTGTTCAAAAAACAAAAACAGCCACAGAACGTGCCGCTCTTGAAG AAATAATCAGCATTGCTGGCTCATCACGGGAAGAAATTTTCTATTCAACTTTTATTTTTTTAAACACCGCTGAGACAAAA AATCAACTAAAAGAAATTGAAAGTCAAAATCGGAATAATCTAAGAAATATTGGGGCAACTATCAATCCATTAAAATACCG ACAATTGCAAGGTTTTGCATCACTTTTTTTTCGTTTTAGTAATTTTTTAAAAGAAGAAATTGAAATGCCGGCTAGCAATA TTGCTTTTGGAATCCCGTTTACCTCACGAAATTTTAATGATGGAAATTATAATATCATCGGAATTAGCAAAACTGATTAT ACTCCGGTTTTTTTTGATCTTTTTCGGCAAAATCAAGACAGAAAAAATTCAAACTGTTTTATTTTAGGAACTTCGGGGGC TGGAAAATCAACGATGACAAAAAAATTACTAACATATAATAAGGCAATCAATAATTCCGTAATCGTTTTAGATCCACAAA ATGAATATTGAAAAATTGGTGATAATTTAAATGCAAATCGAATTAATTTTGGTGGAGGAGATCTAACAATTTTTAATCCC TTGCAAATCCAAAAGGTTTTCAATCCCCAATCAAAACAAGAAGAAGCAGAAGATTTTAATAATTCAGAAACAATTGCCCT TCATTTGCAAAATTTAGAAAAATTTTTTGGAATTCTACTACCAAATTTAGAACATAAAATGGTCATGGCAGTTATTGAAA CTATTAATGAAATGTATAAAAACCGCGGTTTTTATGTACTTTTTGAGGATGTTTGCCTTTTAGAACCAGATAAATTCCCT ACAATTACTGATTTAATCCAAAAATTTCAAGAGTTAAATTTTGACTATATTACCGACTTTGAAAAGACAATTATTTTATC AACTTTGCGCTATGAATTTAACCAATATGGGAAATTAAACCGATTATTTAATGGCCACAGTACAAATTTAGATATCTCAC GTGGATTGGTAATTTTTAATGTCTCGACTTTGATGCACCTGGAAAAACGAATTTACCAATCTGCTTTTTTTCTTGTTTTA TCATTTATTGAAGGAAAAATTGCAACTAATTTCTATAAAAACCAAAAAATTGTATTAATTGTCGATGAAGCACACCGTTT TATTGACGAATCCAATACAATTGCCCTTGATTTTTTATTCAAAATTGCAAAAACTATCCGGAAATACAACGGTTCTTTAA TAATTACTACGCAAAATCCGGGTGATTTTGCAATTAGTGGTGAAGCTGCTAGAAAATCTGAGGCAATTATTGAAAACTGC CAATATGCTTTCTTTTTTAACCTAAAGAGCAATGATATTGAAAAAGTTGACAAACTTTTTTCTTCCTCAGGCGGACTTAC TAATGAAGAGAAAAAATTTATTGCTCTTTCTCAAATTGGCGAATTTATTTTTTCTTCAAACCTAAATGACCGTTATATTT GCTCAGGTTATTTTAACAAAATGGAGAAAAAATTATTTTTTGATAAAGGAGATAAATCAAATAAGGAGGAAAATTAA
Upstream 100 bases:
>100_bases AAATTAAACCTGAAAATGACAATATGAAATCAGAAATTATTGATGATAAAAAAGATAAATAATGCAAAAAAATAGCTAAA AAACGGAAAAACTAATGAAA
Downstream 100 bases:
>100_bases TGATAAAAAAATTACCATTTTTTTTAACTGCTGCGGTAATTCCGTTGCCTTTTTTATCAATTAGCTTTCAAAAAAATAAT GATTATTTTGAAATTAATGA
Product: putative TRSE-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MQNKRIKNVQIQIFRKITLIDLPIIMIMFFISASISFALPEDIFILWKILISASLFFIFTVPLIKHYKNWGLKGYKILWY IILYTSRPKIYTKTSKTSANTGNLLPYTRAKQDFIKVGGGFVGGIEINGQDIFSIGTEKIEQILQQLTVSLNAISNRISI VKIAHPNDLTKNKLFFLRYQDECLENLGENLCLEYKNDIANFDTYLHHRYFIIVYEKNDVSLLQQVSLLRANISSTGFRA RIAPLRDLLDLNLKIINFNDFLNDEEFNNIRNGDDISKYLAQNKIEWYPENFKINDIYFSVQSINEYPFNLPLGWAAQLF STNSSVVWHLNRLTATEKENSFNKGAKNLESNLNDQKNVVQKTKTATERAALEEIISIAGSSREEIFYSTFIFLNTAETK NQLKEIESQNRNNLRNIGATINPLKYRQLQGFASLFFRFSNFLKEEIEMPASNIAFGIPFTSRNFNDGNYNIIGISKTDY TPVFFDLFRQNQDRKNSNCFILGTSGAGKSTMTKKLLTYNKAINNSVIVLDPQNEYWKIGDNLNANRINFGGGDLTIFNP LQIQKVFNPQSKQEEAEDFNNSETIALHLQNLEKFFGILLPNLEHKMVMAVIETINEMYKNRGFYVLFEDVCLLEPDKFP TITDLIQKFQELNFDYITDFEKTIILSTLRYEFNQYGKLNRLFNGHSTNLDISRGLVIFNVSTLMHLEKRIYQSAFFLVL SFIEGKIATNFYKNQKIVLIVDEAHRFIDESNTIALDFLFKIAKTIRKYNGSLIITTQNPGDFAISGEAARKSEAIIENC QYAFFFNLKSNDIEKVDKLFSSSGGLTNEEKKFIALSQIGEFIFSSNLNDRYICSGYFNKMEKKLFFDKGDKSNKEEN
Sequences:
>Translated_878_residues LQNKRIKNVQIQIFRKITLIDLPIIMIMFFISASISFALPEDIFIL*KILISASLFFIFTVPLIKHYKN*GLKGYKIL*Y IILYTSRPKIYTKTSKTSANTGNLLPYTRAKQDFIKVGGGFVGGIEINGQDIFSIGTEKIEQILQQLTVSLNAISNRISI VKIAHPNDLTKNKLFFLRYQDECLENLGENLCLEYKNDIANFDTYLHHRYFIIVYEKNDVSLLQQVSLLRANISSTGFRA RIAPLRDLLDLNLKIINFNDFLNDEEFNNIRNGDDISKYLAQNKIE*YPENFKINDIYFSVQSINEYPFNLPLG*AAQLF STNSSVVWHLNRLTATEKENSFNKGAKNLESNLNDQKNVVQKTKTATERAALEEIISIAGSSREEIFYSTFIFLNTAETK NQLKEIESQNRNNLRNIGATINPLKYRQLQGFASLFFRFSNFLKEEIEMPASNIAFGIPFTSRNFNDGNYNIIGISKTDY TPVFFDLFRQNQDRKNSNCFILGTSGAGKSTMTKKLLTYNKAINNSVIVLDPQNEY*KIGDNLNANRINFGGGDLTIFNP LQIQKVFNPQSKQEEAEDFNNSETIALHLQNLEKFFGILLPNLEHKMVMAVIETINEMYKNRGFYVLFEDVCLLEPDKFP TITDLIQKFQELNFDYITDFEKTIILSTLRYEFNQYGKLNRLFNGHSTNLDISRGLVIFNVSTLMHLEKRIYQSAFFLVL SFIEGKIATNFYKNQKIVLIVDEAHRFIDESNTIALDFLFKIAKTIRKYNGSLIITTQNPGDFAISGEAARKSEAIIENC QYAFFFNLKSNDIEKVDKLFSSSGGLTNEEKKFIALSQIGEFIFSSNLNDRYICSGYFNKMEKKLFFDKGDKSNKEEN >Mature_878_residues LQNKRIKNVQIQIFRKITLIDLPIIMIMFFISASISFALPEDIFIL*KILISASLFFIFTVPLIKHYKN*GLKGYKIL*Y IILYTSRPKIYTKTSKTSANTGNLLPYTRAKQDFIKVGGGFVGGIEINGQDIFSIGTEKIEQILQQLTVSLNAISNRISI VKIAHPNDLTKNKLFFLRYQDECLENLGENLCLEYKNDIANFDTYLHHRYFIIVYEKNDVSLLQQVSLLRANISSTGFRA RIAPLRDLLDLNLKIINFNDFLNDEEFNNIRNGDDISKYLAQNKIE*YPENFKINDIYFSVQSINEYPFNLPLG*AAQLF STNSSVVWHLNRLTATEKENSFNKGAKNLESNLNDQKNVVQKTKTATERAALEEIISIAGSSREEIFYSTFIFLNTAETK NQLKEIESQNRNNLRNIGATINPLKYRQLQGFASLFFRFSNFLKEEIEMPASNIAFGIPFTSRNFNDGNYNIIGISKTDY TPVFFDLFRQNQDRKNSNCFILGTSGAGKSTMTKKLLTYNKAINNSVIVLDPQNEY*KIGDNLNANRINFGGGDLTIFNP LQIQKVFNPQSKQEEAEDFNNSETIALHLQNLEKFFGILLPNLEHKMVMAVIETINEMYKNRGFYVLFEDVCLLEPDKFP TITDLIQKFQELNFDYITDFEKTIILSTLRYEFNQYGKLNRLFNGHSTNLDISRGLVIFNVSTLMHLEKRIYQSAFFLVL SFIEGKIATNFYKNQKIVLIVDEAHRFIDESNTIALDFLFKIAKTIRKYNGSLIITTQNPGDFAISGEAARKSEAIIENC QYAFFFNLKSNDIEKVDKLFSSSGGLTNEEKKFIALSQIGEFIFSSNLNDRYICSGYFNKMEKKLFFDKGDKSNKEEN
Specific function: Unknown
COG id: COG3451
COG function: function code U; Type IV secretory pathway, VirB4 components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100095; Mature: 100095
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LQNKRIKNVQIQIFRKITLIDLPIIMIMFFISASISFALPEDIFILKILISASLFFIFTV CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH PLIKHYKNGLKGYKILYIILYTSRPKIYTKTSKTSANTGNLLPYTRAKQDFIKVGGGFVG HHHHHHHCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEE GIEINGQDIFSIGTEKIEQILQQLTVSLNAISNRISIVKIAHPNDLTKNKLFFLRYQDEC EEEECCCHHECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEHHHH LENLGENLCLEYKNDIANFDTYLHHRYFIIVYEKNDVSLLQQVSLLRANISSTGFRARIA HHHCCHHHEEHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEHH PLRDLLDLNLKIINFNDFLNDEEFNNIRNGDDISKYLAQNKIEYPENFKINDIYFSVQSI HHHHHHCCCEEEEEEHHCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEECC NEYPFNLPLGAAQLFSTNSSVVWHLNRLTATEKENSFNKGAKNLESNLNDQKNVVQKTKT CCCCCCCCCCHHHHHCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH ATERAALEEIISIAGSSREEIFYSTFIFLNTAETKNQLKEIESQNRNNLRNIGATINPLK HHHHHHHHHHHHHHCCCCHHEEEEEEEEEECHHHHHHHHHHHHCCCCCHHHCCCCCCCHH YRQLQGFASLFFRFSNFLKEEIEMPASNIAFGIPFTSRNFNDGNYNIIGISKTDYTPVFF HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHH DLFRQNQDRKNSNCFILGTSGAGKSTMTKKLLTYNKAINNSVIVLDPQNEYKIGDNLNAN HHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCC RINFGGGDLTIFNPLQIQKVFNPQSKQEEAEDFNNSETIALHLQNLEKFFGILLPNLEHK EEEECCCCEEEECCHHHHHHCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCHHH MVMAVIETINEMYKNRGFYVLFEDVCLLEPDKFPTITDLIQKFQELNFDYITDFEKTIIL HHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHH STLRYEFNQYGKLNRLFNGHSTNLDISRGLVIFNVSTLMHLEKRIYQSAFFLVLSFIEGK HHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCH IATNFYKNQKIVLIVDEAHRFIDESNTIALDFLFKIAKTIRKYNGSLIITTQNPGDFAIS HHHHEECCCEEEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEC GEAARKSEAIIENCQYAFFFNLKSNDIEKVDKLFSSSGGLTNEEKKFIALSQIGEFIFSS CCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHEEEHHHHHHHHHCC NLNDRYICSGYFNKMEKKLFFDKGDKSNKEEN CCCCCEEECHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA