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The map label for this gene is nrdF [H]

Identifier: 71893573

GI number: 71893573

Start: 253940

End: 254959

Strand: Reverse

Name: nrdF [H]

Synonym: MHJ_0217

Alternate gene names: 71893573

Gene position: 254959-253940 (Counterclockwise)

Preceding gene: 71893574

Following gene: 71893572

Centisome position: 28.41

GC content: 32.55

Gene sequence:

>1020_bases
TTAAAAATAAAAAACGACTACTACCATCAATCAGTTTCGCCACTCGAATATGCGCTTAATAATTTTTCAGGAAAAATGCG
ATCAATCAACTGAAATATCATAAATGATCCAAAAGATCTTGAAGTTTGAACCCGAATAGTGCAAAATTTCTGAATTCCAG
AAAAAATTCCGCTTTCAAATGATCTTGAATCCTGAAGAACTTTATCACCTACCTGAAAAAAAGTAGTTACTCGCACTTTT
ACCGGACTTACTTTACTTGATACAATTCAGGCAACAATCGGTGATGTAGCCCAAATTAAACACTCTTTAACTGATCATGA
ACAGGTAATTTATACAAATTTCGCTTTTATGGTTGGGGTTCATGCTCGTTCTTATGGTTCAATTTTTTCTACCCTTTGCT
CAAGTGAAGAAATAGAAGAGGCGCATAACTGGGTAATCAATAACGAAAAATTGCAAAAAAGGGCCAGAATTCTTATACCT
TTTTATGTAGGTGAAGATCCTTTAAAATCAAAAGTTGCTGCTGCTTTAATGCCTGGTTTTCTCTTATATGGTGGTTTTTA
TCTTCCTTTTTATCTTTCAGCGCGTTCAAAACTGCCAAATACATCCGATATTATTCGACTGATTTTACGCGATAAAGTGA
TTCATAATTATTATTCAGGTTATAAATTTCAAAAAAAAGTGGAAAAATTAAGCCCGGAAAAACAAGACGAAATTAAAAAA
TTTACCTTTGATCTATTATATAAACTAATTGAATTAGAAAAAGATTATCTCTATGATTTATATTCTGAAGTTGGACTTGC
TGAATCAGCAATAAAATTTAGCATTTATAATGCCGGGAAATTCTTGCAAAATCTAGGATATGATTCACCTTTTTCAAAAG
AGGAAACCGAAATTGAACCTGAAATTTTTAGTCAATTATCGGCTCGAGCTGATGAAAATCATGACTTTTTTTCAGGAAAT
GGCTCTTCTTATGTAATGGCGCTTGCTGAAGAAACCGAAGATGAAGATTGGGAGTTTTAA

Upstream 100 bases:

>100_bases
AAAAATATTTTTGATTTTTTGGTAAAATTAAGGCCCAAGACACTAAAAAGAGCTAAATATGATTAATTCAAAATTAAATA
GTAATAGTAATAATAATAAA

Downstream 100 bases:

>100_bases
AATGACAAATGATGAAAAATATGATATAATAAACAAATCTAAATTAAGAGGAGAAATTTTTGTTGTTTATTTTTCCTCAA
TTTCGAATAATACCCATCGG

Product: ribonucleotide-diphosphate reductase subunit beta

Products: NA

Alternate protein names: Ribonucleotide reductase small subunit [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKIKNDYYHQSVSPLEYALNNFSGKMRSINWNIINDPKDLEVWTRIVQNFWIPEKIPLSNDLESWRTLSPTWKKVVTRTF
TGLTLLDTIQATIGDVAQIKHSLTDHEQVIYTNFAFMVGVHARSYGSIFSTLCSSEEIEEAHNWVINNEKLQKRARILIP
FYVGEDPLKSKVAAALMPGFLLYGGFYLPFYLSARSKLPNTSDIIRLILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKK
FTFDLLYKLIELEKDYLYDLYSEVGLAESAIKFSIYNAGKFLQNLGYDSPFSKEETEIEPEIFSQLSARADENHDFFSGN
GSSYVMALAEETEDEDWEF

Sequences:

>Translated_339_residues
LKIKNDYYHQSVSPLEYALNNFSGKMRSIN*NIINDPKDLEV*TRIVQNF*IPEKIPLSNDLES*RTLSPT*KKVVTRTF
TGLTLLDTIQATIGDVAQIKHSLTDHEQVIYTNFAFMVGVHARSYGSIFSTLCSSEEIEEAHNWVINNEKLQKRARILIP
FYVGEDPLKSKVAAALMPGFLLYGGFYLPFYLSARSKLPNTSDIIRLILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKK
FTFDLLYKLIELEKDYLYDLYSEVGLAESAIKFSIYNAGKFLQNLGYDSPFSKEETEIEPEIFSQLSARADENHDFFSGN
GSSYVMALAEETEDEDWEF
>Mature_339_residues
LKIKNDYYHQSVSPLEYALNNFSGKMRSIN*NIINDPKDLEV*TRIVQNF*IPEKIPLSNDLES*RTLSPT*KKVVTRTF
TGLTLLDTIQATIGDVAQIKHSLTDHEQVIYTNFAFMVGVHARSYGSIFSTLCSSEEIEEAHNWVINNEKLQKRARILIP
FYVGEDPLKSKVAAALMPGFLLYGGFYLPFYLSARSKLPNTSDIIRLILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKK
FTFDLLYKLIELEKDYLYDLYSEVGLAESAIKFSIYNAGKFLQNLGYDSPFSKEETEIEPEIFSQLSARADENHDFFSGN
GSSYVMALAEETEDEDWEF

Specific function: Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides [H]

COG id: COG0208

COG function: function code F; Ribonucleotide reductase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonucleoside diphosphate reductase small chain family [H]

Homologues:

Organism=Escherichia coli, GI1789031, Length=316, Percent_Identity=50.6329113924051, Blast_Score=317, Evalue=9e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009078
- InterPro:   IPR012348
- InterPro:   IPR000358 [H]

Pfam domain/function: PF00268 Ribonuc_red_sm [H]

EC number: =1.17.4.1 [H]

Molecular weight: Translated: 38279; Mature: 38279

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LKIKNDYYHQSVSPLEYALNNFSGKMRSINNIINDPKDLEVTRIVQNFIPEKIPLSNDLE
CCCCCCHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCH
SRTLSPTKKVVTRTFTGLTLLDTIQATIGDVAQIKHSLTDHEQVIYTNFAFMVGVHARSY
HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GSIFSTLCSSEEIEEAHNWVINNEKLQKRARILIPFYVGEDPLKSKVAAALMPGFLLYGG
HHHHHHHHCHHHHHHHHHHCCCCHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
FYLPFYLSARSKLPNTSDIIRLILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKKFTFDL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHH
LYKLIELEKDYLYDLYSEVGLAESAIKFSIYNAGKFLQNLGYDSPFSKEETEIEPEIFSQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LSARADENHDFFSGNGSSYVMALAEETEDEDWEF
HHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]