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The map label for this gene is yicC [H]

Identifier: 71892380

GI number: 71892380

Start: 762965

End: 763846

Strand: Direct

Name: yicC [H]

Synonym: BPEN_639

Alternate gene names: 71892380

Gene position: 762965-763846 (Clockwise)

Preceding gene: 71892379

Following gene: 71892381

Centisome position: 96.38

GC content: 27.78

Gene sequence:

>882_bases
ATGATTCATAGTATGACGGCTTTCTCAAGACATGAAGTAAAATATACATGGGGTAATGTTACCTGGGAAATTTGTTCTTT
AAATCAACGTTATTTAGATATTCATATCGATTTACCTAAATATCTTTGTGATTTGTCATGGGTAATTCGTAAAAATATTA
AAGATACTATTATTAGAGGAAGGATAGAATGCACTTTACATATCAAAATAAATAACAATTGCGACAATAATACAGAGTCA
CTTACTGTTAATAAACAATTGGTGCATGATCTTGTGTTATACGCAAAATGGGTAAAAACATTAACTAATGAAGGTGAAAT
TAATCCGATAGATATCTTATCTTGGCCAGGAGTAATAACGTATAAACAAAATAATTTAAATAATATAAATAATGTTCATT
CCGAATTATTAATATGTTTTAAAGAAACATTACATAATTTAATACAAAATAGAAAAAGAGAAGGTATTTTTTTAAAAAAT
AAAATTATAGAACGATTACATCTAATGTACGCTGAAGTGAACAAAATTCATCAACATATCCCTAATGTATTAGAGTACAA
ACGCAAAACACTTTTGGAAAAAATGAAAGATGTTTGCATTTATTCTGACTCAATACGATTGGAACAAGAATTATTAATAA
TAGCTCAAAAAATTGATATTTCAGAAGAAGTAGATCGTCTAATTATTCATATCAAAGAGATGCATCGTATTCTCGATGGG
AACGGGGCTGTTGGTAGAAAACTAGATTTTGTAATACAAGAACTACATAGAGAGGCTAACACATTAACTTCTAAATCTAT
AAATTCTTATATTACTCAATTAGCAATTTCCTTAAAAATACTTATTGAACAGATACGCGAGCAAACGCAGAACATTGAGT
AA

Upstream 100 bases:

>100_bases
ATTGATGTATATAAATTAATTAAAAAATGCATGACAAAACAGAATTCTGGCAACTTTAAAGTTTATTTTTGTACATATTA
ACGAAATTTAGGTAATTGTT

Downstream 100 bases:

>100_bases
ATATAATCAGAGTACCTACCTATAAAATATAAAATCTTTTCATATATAAAATCTATATTAGTCATATAACCTGCTAATTT
TTATAATTATTAATTATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIHSMTAFSRHEVKYTWGNVTWEICSLNQRYLDIHIDLPKYLCDLSWVIRKNIKDTIIRGRIECTLHIKINNNCDNNTES
LTVNKQLVHDLVLYAKWVKTLTNEGEINPIDILSWPGVITYKQNNLNNINNVHSELLICFKETLHNLIQNRKREGIFLKN
KIIERLHLMYAEVNKIHQHIPNVLEYKRKTLLEKMKDVCIYSDSIRLEQELLIIAQKIDISEEVDRLIIHIKEMHRILDG
NGAVGRKLDFVIQELHREANTLTSKSINSYITQLAISLKILIEQIREQTQNIE

Sequences:

>Translated_293_residues
MIHSMTAFSRHEVKYTWGNVTWEICSLNQRYLDIHIDLPKYLCDLSWVIRKNIKDTIIRGRIECTLHIKINNNCDNNTES
LTVNKQLVHDLVLYAKWVKTLTNEGEINPIDILSWPGVITYKQNNLNNINNVHSELLICFKETLHNLIQNRKREGIFLKN
KIIERLHLMYAEVNKIHQHIPNVLEYKRKTLLEKMKDVCIYSDSIRLEQELLIIAQKIDISEEVDRLIIHIKEMHRILDG
NGAVGRKLDFVIQELHREANTLTSKSINSYITQLAISLKILIEQIREQTQNIE
>Mature_293_residues
MIHSMTAFSRHEVKYTWGNVTWEICSLNQRYLDIHIDLPKYLCDLSWVIRKNIKDTIIRGRIECTLHIKINNNCDNNTES
LTVNKQLVHDLVLYAKWVKTLTNEGEINPIDILSWPGVITYKQNNLNNINNVHSELLICFKETLHNLIQNRKREGIFLKN
KIIERLHLMYAEVNKIHQHIPNVLEYKRKTLLEKMKDVCIYSDSIRLEQELLIIAQKIDISEEVDRLIIHIKEMHRILDG
NGAVGRKLDFVIQELHREANTLTSKSINSYITQLAISLKILIEQIREQTQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=293, Percent_Identity=45.3924914675768, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34479; Mature: 34479

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHSMTAFSRHEVKYTWGNVTWEICSLNQRYLDIHIDLPKYLCDLSWVIRKNIKDTIIRG
CCCCCCCHHHCCEEEEECCEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCC
RIECTLHIKINNNCDNNTESLTVNKQLVHDLVLYAKWVKTLTNEGEINPIDILSWPGVIT
EEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEE
YKQNNLNNINNVHSELLICFKETLHNLIQNRKREGIFLKNKIIERLHLMYAEVNKIHQHI
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PNVLEYKRKTLLEKMKDVCIYSDSIRLEQELLIIAQKIDISEEVDRLIIHIKEMHRILDG
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
NGAVGRKLDFVIQELHREANTLTSKSINSYITQLAISLKILIEQIREQTQNIE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIHSMTAFSRHEVKYTWGNVTWEICSLNQRYLDIHIDLPKYLCDLSWVIRKNIKDTIIRG
CCCCCCCHHHCCEEEEECCEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCC
RIECTLHIKINNNCDNNTESLTVNKQLVHDLVLYAKWVKTLTNEGEINPIDILSWPGVIT
EEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEE
YKQNNLNNINNVHSELLICFKETLHNLIQNRKREGIFLKNKIIERLHLMYAEVNKIHQHI
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PNVLEYKRKTLLEKMKDVCIYSDSIRLEQELLIIAQKIDISEEVDRLIIHIKEMHRILDG
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
NGAVGRKLDFVIQELHREANTLTSKSINSYITQLAISLKILIEQIREQTQNIE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]