Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is dfp [H]
Identifier: 71892378
GI number: 71892378
Start: 760593
End: 761801
Strand: Direct
Name: dfp [H]
Synonym: BPEN_637
Alternate gene names: 71892378
Gene position: 760593-761801 (Clockwise)
Preceding gene: 71892375
Following gene: 71892379
Centisome position: 96.08
GC content: 32.92
Gene sequence:
>1209_bases ATGACGGGATTAATTAATAAACATATCATATTAGGAGTAAGCGGTGGTATCGCAGCATATAAAACTATAGATCTTGTACG ATGTTTAAAAGAACAAGGTTCAGAAGTGAGAGTGATAATGACAAAATCTGCAAAAAAATTTGTTACCCCCTTAAGTTTAC AAACAATATCGTGTCATCCAGTTTTGGATAATTTTCTTACCCCTCAAATAGAAACCACAATGCCTCACATAAAGTTAGCT AAATGGGCTGATTTAGTTTTACTTGCTCCGGCTACAGCCAATTTATTAGCTAGATTATCTGTAGGATTAGCTAATGATTT ATTATGTAGTTTATGTTTAGCTACAACAGCTCCTATTGCTGTAGCTCCATCTATGAATCAACAAATGTATAAAGCTATTG CAACTCAAACAAATTTAGATATTCTACGAAAAAGAGGAGTTTTAATATGGGGTCCGGATTACGGATGTCAAGCTTGTAAT GATATTGGTTATGGACGCATGACGGACCCCAAAGTACTTTCTGAATACGTAAAACATTACTTTTCTCATGATAGTTCTTT AAGTCATCTTAATATCATGATTACTGCTGGTCCTACTCACGAAGCCTTAGATCCCGTTCGTTTTTTTACTAATTATAGTT CAGGAAAAATGGGATTTGCTATCGCTCAAGCCGCTGCAGATAAAGGAGCAAAAGTTACATTAATTACAGGTCCGGTGAAC TTACGTACTCCTATTCGAGTGCAACGTATTAATGTTATTTCCGCTTTAGACATGCAAGAAGCAGTTATGCGAGACATTAG TAATCAACAAATTTTTATCGGTTGTGCAGCGGTATCAGATTACCGCATTTGTCATGTTTCTCTTGACAAGATTAAAAAGA ATAAAAATACTTTAAAAATAATTATGGTTAAGAACCCCGATATTGTGGCGAAAGTAGGGTCGTTAATTGAAAACCGTCCT TATGTCGTTGGATTTGCCGCTGAAACTAATAATATACAAAAATATGCTCAAGATAAACGTATTAGTAAACATTTAGATTT AATTTGTGCTAATAATATTTCTCGTATAAACCAAGGATTCAATAGTGATAATAATGCTTTATATTTATTTTGGAATAAAG GAAGCGTTATATTGCCTTTAAGAAAAAAAAAATTGTTAGCACAACAACTTATTAACGAAATTATTGATCGTTATAATGAA AATAATTAA
Upstream 100 bases:
>100_bases CATGTGAAGATGATTTAATTTTATTTATACTAACAAAAACTAACAGTTTTTGTTAGTATAAATAAAATTAAATCATCTTC AATATCATGTGAAATATAAT
Downstream 100 bases:
>100_bases TGTTAAAATTATTGATAATCGAATTTATAAGCATTTTTATTTACCAAAATATGCTACGTCAGGATCTGCTGGATTAGATT TATCAGCTTGTTTAGATAAA
Product: 4'-phosphopantothenoylcysteine decarboxylase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTGLINKHIILGVSGGIAAYKTIDLVRCLKEQGSEVRVIMTKSAKKFVTPLSLQTISCHPVLDNFLTPQIETTMPHIKLA KWADLVLLAPATANLLARLSVGLANDLLCSLCLATTAPIAVAPSMNQQMYKAIATQTNLDILRKRGVLIWGPDYGCQACN DIGYGRMTDPKVLSEYVKHYFSHDSSLSHLNIMITAGPTHEALDPVRFFTNYSSGKMGFAIAQAAADKGAKVTLITGPVN LRTPIRVQRINVISALDMQEAVMRDISNQQIFIGCAAVSDYRICHVSLDKIKKNKNTLKIIMVKNPDIVAKVGSLIENRP YVVGFAAETNNIQKYAQDKRISKHLDLICANNISRINQGFNSDNNALYLFWNKGSVILPLRKKKLLAQQLINEIIDRYNE NN
Sequences:
>Translated_402_residues MTGLINKHIILGVSGGIAAYKTIDLVRCLKEQGSEVRVIMTKSAKKFVTPLSLQTISCHPVLDNFLTPQIETTMPHIKLA KWADLVLLAPATANLLARLSVGLANDLLCSLCLATTAPIAVAPSMNQQMYKAIATQTNLDILRKRGVLIWGPDYGCQACN DIGYGRMTDPKVLSEYVKHYFSHDSSLSHLNIMITAGPTHEALDPVRFFTNYSSGKMGFAIAQAAADKGAKVTLITGPVN LRTPIRVQRINVISALDMQEAVMRDISNQQIFIGCAAVSDYRICHVSLDKIKKNKNTLKIIMVKNPDIVAKVGSLIENRP YVVGFAAETNNIQKYAQDKRISKHLDLICANNISRINQGFNSDNNALYLFWNKGSVILPLRKKKLLAQQLINEIIDRYNE NN >Mature_401_residues TGLINKHIILGVSGGIAAYKTIDLVRCLKEQGSEVRVIMTKSAKKFVTPLSLQTISCHPVLDNFLTPQIETTMPHIKLAK WADLVLLAPATANLLARLSVGLANDLLCSLCLATTAPIAVAPSMNQQMYKAIATQTNLDILRKRGVLIWGPDYGCQACND IGYGRMTDPKVLSEYVKHYFSHDSSLSHLNIMITAGPTHEALDPVRFFTNYSSGKMGFAIAQAAADKGAKVTLITGPVNL RTPIRVQRINVISALDMQEAVMRDISNQQIFIGCAAVSDYRICHVSLDKIKKNKNTLKIIMVKNPDIVAKVGSLIENRPY VVGFAAETNNIQKYAQDKRISKHLDLICANNISRINQGFNSDNNALYLFWNKGSVILPLRKKKLLAQQLINEIIDRYNEN N
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=185, Percent_Identity=30.8108108108108, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI87082301, Length=402, Percent_Identity=60.9452736318408, Blast_Score=501, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6322762, Length=188, Percent_Identity=29.7872340425532, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24657262, Length=189, Percent_Identity=25.9259259259259, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 44434; Mature: 44302
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLINKHIILGVSGGIAAYKTIDLVRCLKEQGSEVRVIMTKSAKKFVTPLSLQTISCHP CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCCCEEEEEEECH VLDNFLTPQIETTMPHIKLAKWADLVLLAPATANLLARLSVGLANDLLCSLCLATTAPIA HHHHHCCCCHHHCCCCEEHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VAPSMNQQMYKAIATQTNLDILRKRGVLIWGPDYGCQACNDIGYGRMTDPKVLSEYVKHY ECCCCCHHHHHHHHHCCCHHHHHHCCEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHH FSHDSSLSHLNIMITAGPTHEALDPVRFFTNYSSGKMGFAIAQAAADKGAKVTLITGPVN HCCCCCCCEEEEEEEECCCCHHCCHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCC LRTPIRVQRINVISALDMQEAVMRDISNQQIFIGCAAVSDYRICHVSLDKIKKNKNTLKI CCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEHHHHHCCCCEEEE IMVKNPDIVAKVGSLIENRPYVVGFAAETNNIQKYAQDKRISKHLDLICANNISRINQGF EEEECCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC NSDNNALYLFWNKGSVILPLRKKKLLAQQLINEIIDRYNENN CCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGLINKHIILGVSGGIAAYKTIDLVRCLKEQGSEVRVIMTKSAKKFVTPLSLQTISCHP CCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCCCEEEEEEECH VLDNFLTPQIETTMPHIKLAKWADLVLLAPATANLLARLSVGLANDLLCSLCLATTAPIA HHHHHCCCCHHHCCCCEEHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VAPSMNQQMYKAIATQTNLDILRKRGVLIWGPDYGCQACNDIGYGRMTDPKVLSEYVKHY ECCCCCHHHHHHHHHCCCHHHHHHCCEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHH FSHDSSLSHLNIMITAGPTHEALDPVRFFTNYSSGKMGFAIAQAAADKGAKVTLITGPVN HCCCCCCCEEEEEEEECCCCHHCCHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCC LRTPIRVQRINVISALDMQEAVMRDISNQQIFIGCAAVSDYRICHVSLDKIKKNKNTLKI CCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEHHHHHCCCCEEEE IMVKNPDIVAKVGSLIENRPYVVGFAAETNNIQKYAQDKRISKHLDLICANNISRINQGF EEEECCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC NSDNNALYLFWNKGSVILPLRKKKLLAQQLINEIIDRYNENN CCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]