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The map label for this gene is ureF

Identifier: 71892294

GI number: 71892294

Start: 646116

End: 646802

Strand: Reverse

Name: ureF

Synonym: BPEN_541

Alternate gene names: 71892294

Gene position: 646802-646116 (Counterclockwise)

Preceding gene: 71892295

Following gene: 71892293

Centisome position: 81.7

GC content: 37.85

Gene sequence:

>687_bases
ATGTGTGCTGATCACGGTATTAGTTCAGTCTTGTCTTTAATGCAATTGGTTAGTTCTAACTTTCCTGTGGGGAGTTTTGC
TTATTCACGAGGTTTAGAGTGGGCGGTAGAAAATAATTGGGTTAATTCTGTAGAAACTTTTTATTCTTGGCAACAACAAT
GGATTGATGGGCCATTAATTTATTTAGAATGGCCGATGCTTAAGCGTTGCTACTATTATGCTCAAATTAGAGATGAAATG
AATTTTTTTCAATGTGCATTAAGGATATTGTCCTATCGTGACACTCATGAGCTTAGATTAGAAGAGAGACAACGCGGGAA
AGCGTTGTCGAGAATAATATTGCAATGGTATCCATTTACGGATGGTGGCACTTGGTTATCAGCTTTAGAACATAGTGGCT
TAGCATCAATAGCATGGTTAGGGTATACGTGGAGTATTTCTTTAGAAAATTTAGCGTTAGGATATGCCTATAATATGTTG
GAATCTGCTACAATGGCAGGTTTGAAACTGGTGCCTTTTGGGCAAATAACTGCTCAGAGATTATTAAGATCCTTGATGGA
ACGCCTTCCTAATGATTGGAAGAAATCTGATATGATAGCAGATCATGAACTGGGCAATGGCTTTTTGTTGCAATCTATAG
CATCCTCCTGTCATGAGACACAATATTCACGATTATTTCGTTCCTAA

Upstream 100 bases:

>100_bases
AAGAAACAGAGTTTTTTGTGATTGTTATTTTTATAATAATTTGAGACTACAATGATATTTATGTTAATATTTTATAAATA
TTATTTATATTATTATAATT

Downstream 100 bases:

>100_bases
AAGTATTTTATTTTTAATAAAATATACGTATATAAAATGTATTATATGGATAATCAATTTTTAATTGGGGGACATGTGTT
TTGTTATTAAATCAATATAG

Product: putative urease accessory protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MCADHGISSVLSLMQLVSSNFPVGSFAYSRGLEWAVENNWVNSVETFYSWQQQWIDGPLIYLEWPMLKRCYYYAQIRDEM
NFFQCALRILSYRDTHELRLEERQRGKALSRIILQWYPFTDGGTWLSALEHSGLASIAWLGYTWSISLENLALGYAYNML
ESATMAGLKLVPFGQITAQRLLRSLMERLPNDWKKSDMIADHELGNGFLLQSIASSCHETQYSRLFRS

Sequences:

>Translated_228_residues
MCADHGISSVLSLMQLVSSNFPVGSFAYSRGLEWAVENNWVNSVETFYSWQQQWIDGPLIYLEWPMLKRCYYYAQIRDEM
NFFQCALRILSYRDTHELRLEERQRGKALSRIILQWYPFTDGGTWLSALEHSGLASIAWLGYTWSISLENLALGYAYNML
ESATMAGLKLVPFGQITAQRLLRSLMERLPNDWKKSDMIADHELGNGFLLQSIASSCHETQYSRLFRS
>Mature_228_residues
MCADHGISSVLSLMQLVSSNFPVGSFAYSRGLEWAVENNWVNSVETFYSWQQQWIDGPLIYLEWPMLKRCYYYAQIRDEM
NFFQCALRILSYRDTHELRLEERQRGKALSRIILQWYPFTDGGTWLSALEHSGLASIAWLGYTWSISLENLALGYAYNML
ESATMAGLKLVPFGQITAQRLLRSLMERLPNDWKKSDMIADHELGNGFLLQSIASSCHETQYSRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_BLOPB (Q492F0)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_278028.1
- STRING:   Q492F0
- GeneID:   3562878
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_541
- eggNOG:   COG0830
- HOGENOM:   HBG709295
- OMA:   GFAWLEG
- ProtClustDB:   CLSK280912
- BioCyc:   CBLO291272:BPEN_541-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 26408; Mature: 26408

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCADHGISSVLSLMQLVSSNFPVGSFAYSRGLEWAVENNWVNSVETFYSWQQQWIDGPLI
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCEE
YLEWPMLKRCYYYAQIRDEMNFFQCALRILSYRDTHELRLEERQRGKALSRIILQWYPFT
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
DGGTWLSALEHSGLASIAWLGYTWSISLENLALGYAYNMLESATMAGLKLVPFGQITAQR
CCCHHHHHHHHCCCHHHEEECEEEEEEHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHH
LLRSLMERLPNDWKKSDMIADHELGNGFLLQSIASSCHETQYSRLFRS
HHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCADHGISSVLSLMQLVSSNFPVGSFAYSRGLEWAVENNWVNSVETFYSWQQQWIDGPLI
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCEE
YLEWPMLKRCYYYAQIRDEMNFFQCALRILSYRDTHELRLEERQRGKALSRIILQWYPFT
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
DGGTWLSALEHSGLASIAWLGYTWSISLENLALGYAYNMLESATMAGLKLVPFGQITAQR
CCCHHHHHHHHCCCHHHEEECEEEEEEHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHH
LLRSLMERLPNDWKKSDMIADHELGNGFLLQSIASSCHETQYSRLFRS
HHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA