Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is minD [H]
Identifier: 71892216
GI number: 71892216
Start: 540291
End: 541103
Strand: Direct
Name: minD [H]
Synonym: BPEN_454
Alternate gene names: 71892216
Gene position: 540291-541103 (Clockwise)
Preceding gene: 71892215
Following gene: 71892217
Centisome position: 68.25
GC content: 34.32
Gene sequence:
>813_bases ATGACACGAATAATAGTTATTACTTCAGGAAAAGGAGGAGTAGGTAAAACAACATCAAGCGCAGCTCTCGCTACTGGACT GGCGCGTAAAGGTAAAAAAACCGCTGTCATTGATTTCGATATCGGATTGCGTAATCTTGATTTAGTTATGGGATGCGAAC GTAGAGTAGTATATGATTTTATTAATGTCATCCAAGGTGAAGCCACTTTACATCAAGCATTAATTAAAGATAAACACACT GATTATTTATATATTCTACCTGCTTCACAAACACGTGATAAAAATTCTCTAACTCGGGTTGGAGTAGAAGAAATATTAAA TAATCTTAATAAAATGAACTTTGAATTTATAATATGTGATTCTCCTGCAGGTATTGATAGCGGAGCTTTAACAGCTCTAT ATTTTGCAGACGAAGCCATTGTTACTACCAATCCAGAAATTTCATCAGTACATGACTCAGATCGCATACTGGGTATTTTA GCATCTAAGTCTAAACGTTCCGAAAATGGTATAGACACAATCAAAGAACACCTATTACTAACTCGATATAATCCTAGCCG CGTTCGACGAGGAGATATGCTTAGTTTAGAAGATGTAATAGAGATATTAAGAATTCCTGTACTAGGTGTTATACCAGAAG ATAAATCAGTATTAAAAGCATCTAATCAAGGTGAACCAATCATTTTGGATTCAAAATCTCATGCAGGACAAGCCTATTCA GATACAGTAGATCGTTTGTTAGGTAATCCATGTCCTTTACGCTTTATTGAAGAAAAAAAACTCAATTTTTTTAAACGATT TTTCAAGAGATAA
Upstream 100 bases:
>100_bases ATTCCAAAAGAATTTTCAGGTAAACCAGTAAGACTTAGTTTAAAAGACGATATGCTTATCATTCAAAATTTATAATGTAT CCTGCAATAAGGATTTGTTT
Downstream 100 bases:
>100_bases TACTATTATGGTATTAGTAAATTTCTTTTTTTTTAGAAAAAAAACACCGGCCGACATCGCTAAAAAAAGACTACAAGAAA TTGTTTCTGACCATAACATT
Product: hypothetical protein
Products: NA
Alternate protein names: Cell division inhibitor minD [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTRIIVITSGKGGVGKTTSSAALATGLARKGKKTAVIDFDIGLRNLDLVMGCERRVVYDFINVIQGEATLHQALIKDKHT DYLYILPASQTRDKNSLTRVGVEEILNNLNKMNFEFIICDSPAGIDSGALTALYFADEAIVTTNPEISSVHDSDRILGIL ASKSKRSENGIDTIKEHLLLTRYNPSRVRRGDMLSLEDVIEILRIPVLGVIPEDKSVLKASNQGEPIILDSKSHAGQAYS DTVDRLLGNPCPLRFIEEKKLNFFKRFFKR
Sequences:
>Translated_270_residues MTRIIVITSGKGGVGKTTSSAALATGLARKGKKTAVIDFDIGLRNLDLVMGCERRVVYDFINVIQGEATLHQALIKDKHT DYLYILPASQTRDKNSLTRVGVEEILNNLNKMNFEFIICDSPAGIDSGALTALYFADEAIVTTNPEISSVHDSDRILGIL ASKSKRSENGIDTIKEHLLLTRYNPSRVRRGDMLSLEDVIEILRIPVLGVIPEDKSVLKASNQGEPIILDSKSHAGQAYS DTVDRLLGNPCPLRFIEEKKLNFFKRFFKR >Mature_269_residues TRIIVITSGKGGVGKTTSSAALATGLARKGKKTAVIDFDIGLRNLDLVMGCERRVVYDFINVIQGEATLHQALIKDKHTD YLYILPASQTRDKNSLTRVGVEEILNNLNKMNFEFIICDSPAGIDSGALTALYFADEAIVTTNPEISSVHDSDRILGILA SKSKRSENGIDTIKEHLLLTRYNPSRVRRGDMLSLEDVIEILRIPVLGVIPEDKSVLKASNQGEPIILDSKSHAGQAYSD TVDRLLGNPCPLRFIEEKKLNFFKRFFKR
Specific function: ATPase required for the correct placement of the division site. Cell division inhibitors minC and minD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to desta
COG id: COG2894
COG function: function code D; Septum formation inhibitor-activating ATPase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family. MinD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787423, Length=268, Percent_Identity=77.2388059701492, Blast_Score=435, Evalue=1e-123,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010223 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29918; Mature: 29787
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIIVITSGKGGVGKTTSSAALATGLARKGKKTAVIDFDIGLRNLDLVMGCERRVVYDF CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCHHHHHHH INVIQGEATLHQALIKDKHTDYLYILPASQTRDKNSLTRVGVEEILNNLNKMNFEFIICD HHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEC SPAGIDSGALTALYFADEAIVTTNPEISSVHDSDRILGILASKSKRSENGIDTIKEHLLL CCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHEE TRYNPSRVRRGDMLSLEDVIEILRIPVLGVIPEDKSVLKASNQGEPIILDSKSHAGQAYS EECCHHHHCCCCCCCHHHHHHHHHCCEEEECCCCHHHHHCCCCCCEEEEECCCCCCCHHH DTVDRLLGNPCPLRFIEEKKLNFFKRFFKR HHHHHHHCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TRIIVITSGKGGVGKTTSSAALATGLARKGKKTAVIDFDIGLRNLDLVMGCERRVVYDF EEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCHHHHHHH INVIQGEATLHQALIKDKHTDYLYILPASQTRDKNSLTRVGVEEILNNLNKMNFEFIICD HHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEC SPAGIDSGALTALYFADEAIVTTNPEISSVHDSDRILGILASKSKRSENGIDTIKEHLLL CCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHEE TRYNPSRVRRGDMLSLEDVIEILRIPVLGVIPEDKSVLKASNQGEPIILDSKSHAGQAYS EECCHHHHCCCCCCCHHHHHHHHHCCEEEECCCCHHHHHCCCCCCEEEEECCCCCCCHHH DTVDRLLGNPCPLRFIEEKKLNFFKRFFKR HHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]