Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
---|---|
Accession | NC_007292 |
Length | 791,654 |
Click here to switch to the map view.
The map label for this gene is fabI [H]
Identifier: 71892198
GI number: 71892198
Start: 512610
End: 513398
Strand: Reverse
Name: fabI [H]
Synonym: BPEN_436
Alternate gene names: 71892198
Gene position: 513398-512610 (Counterclockwise)
Preceding gene: 71892207
Following gene: 71892197
Centisome position: 64.85
GC content: 34.47
Gene sequence:
>789_bases ATGGCATTGCTTAGTAATAAGCGAATTTTAGTTACCGGTGTAGCTAACAATAAATCTATAGCTTACGGTATAGCTCAGGC CTTACATAGAGAAGGCGCTGAATTAGCTTTTACTTACCATACCGATAAATTAAAATTGAGAGTACAAAATCTGTCTAAAA ATTTTGATTCTAATATTGTATTACCGTGTGATGTATCCGAAGATTCTTATATAGATAAATTATTTGTTGAGTTGAGAAAA AAGTGGTCGACTTTCGATGGTTTTATACATGCGATAGCGTTTGCTCCTACTGATCAATTGAAAGGTGATTATGTAGATAC TGTTACTCGTGAAGGGTTTACATTATCTCATGTTATTAGTTCTTATAGCTTTGTAGGAATAGCTAAAGCATGCGAAAAAA TGCTTAACAATAGCGCATCCTTAGTTACATTGACTTATTTAGGTGCTATGCGTGCTACTCCTTATTATAATGTAATGGGA TTAGCTAAGGCTTCATTGGAAGCGAATACTCGTTATATGGCCAATACCATGGGACCAAAAAAAGGTATTCGCGTTAATGC GATTTCTTGCGGGCCTGTTCGCACTTTGGCGTCCTCTGGTATTAAGAATTTTAAAAAGATGTTGTTGTGTTATCAAAGGC AATCACCGATGCGTCGTAATATTTCTATTGACGAAATTGGAAATGTTGCTGTATTTTTATGTTCTGATTTATCATCTGGT ATTACTGGTGAAATAATTTATGTTGATGGAGGATTTAATATCGCATCTAATATAGATGATGTAGAATGA
Upstream 100 bases:
>100_bases ATGCAATAATATTTGTTACAATTAATTTTAAATGATTGATGTATTGATTATATTTTTTAAATATTGGTTATAAAAAACCT TATATTTTGGAGATACAAAC
Downstream 100 bases:
>100_bases TTAATATAAATTAGTAATGCGGGATATAGTTATTATATTTGAATGTTTGAGATCGTTCGTGTTTTTAAAAATTTTTGGTT ATAGTGAATATGTGATTTCT
Product: enoyl-[acyl-carrier-protein] reductase (NADH)
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MALLSNKRILVTGVANNKSIAYGIAQALHREGAELAFTYHTDKLKLRVQNLSKNFDSNIVLPCDVSEDSYIDKLFVELRK KWSTFDGFIHAIAFAPTDQLKGDYVDTVTREGFTLSHVISSYSFVGIAKACEKMLNNSASLVTLTYLGAMRATPYYNVMG LAKASLEANTRYMANTMGPKKGIRVNAISCGPVRTLASSGIKNFKKMLLCYQRQSPMRRNISIDEIGNVAVFLCSDLSSG ITGEIIYVDGGFNIASNIDDVE
Sequences:
>Translated_262_residues MALLSNKRILVTGVANNKSIAYGIAQALHREGAELAFTYHTDKLKLRVQNLSKNFDSNIVLPCDVSEDSYIDKLFVELRK KWSTFDGFIHAIAFAPTDQLKGDYVDTVTREGFTLSHVISSYSFVGIAKACEKMLNNSASLVTLTYLGAMRATPYYNVMG LAKASLEANTRYMANTMGPKKGIRVNAISCGPVRTLASSGIKNFKKMLLCYQRQSPMRRNISIDEIGNVAVFLCSDLSSG ITGEIIYVDGGFNIASNIDDVE >Mature_261_residues ALLSNKRILVTGVANNKSIAYGIAQALHREGAELAFTYHTDKLKLRVQNLSKNFDSNIVLPCDVSEDSYIDKLFVELRKK WSTFDGFIHAIAFAPTDQLKGDYVDTVTREGFTLSHVISSYSFVGIAKACEKMLNNSASLVTLTYLGAMRATPYYNVMGL AKASLEANTRYMANTMGPKKGIRVNAISCGPVRTLASSGIKNFKKMLLCYQRQSPMRRNISIDEIGNVAVFLCSDLSSGI TGEIIYVDGGFNIASNIDDVE
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=256, Percent_Identity=66.015625, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=26.953125, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 28795; Mature: 28664
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLSNKRILVTGVANNKSIAYGIAQALHREGAELAFTYHTDKLKLRVQNLSKNFDSNIV CCEECCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEHHCCCCCCCEE LPCDVSEDSYIDKLFVELRKKWSTFDGFIHAIAFAPTDQLKGDYVDTVTREGFTLSHVIS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHCCCCHHHHHHCCCEEHHHHHH SYSFVGIAKACEKMLNNSASLVTLTYLGAMRATPYYNVMGLAKASLEANTRYMANTMGPK HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCEEHHCCCCC KGIRVNAISCGPVRTLASSGIKNFKKMLLCYQRQSPMRRNISIDEIGNVAVFLCSDLSSG CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCEEEEEECCCCCC ITGEIIYVDGGFNIASNIDDVE CCEEEEEEECCCEECCCCCCCC >Mature Secondary Structure ALLSNKRILVTGVANNKSIAYGIAQALHREGAELAFTYHTDKLKLRVQNLSKNFDSNIV CEECCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEEEEHHCCCCCCCEE LPCDVSEDSYIDKLFVELRKKWSTFDGFIHAIAFAPTDQLKGDYVDTVTREGFTLSHVIS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHCCCCHHHHHHCCCEEHHHHHH SYSFVGIAKACEKMLNNSASLVTLTYLGAMRATPYYNVMGLAKASLEANTRYMANTMGPK HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCEEHHCCCCC KGIRVNAISCGPVRTLASSGIKNFKKMLLCYQRQSPMRRNISIDEIGNVAVFLCSDLSSG CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCEEEEEECCCCCC ITGEIIYVDGGFNIASNIDDVE CCEEEEEEECCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]