Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is ybhE
Identifier: 71892119
GI number: 71892119
Start: 415746
End: 416759
Strand: Reverse
Name: ybhE
Synonym: BPEN_351
Alternate gene names: 71892119
Gene position: 416759-415746 (Counterclockwise)
Preceding gene: 71892122
Following gene: 71892402
Centisome position: 52.64
GC content: 33.63
Gene sequence:
>1014_bases ATGATACAAATTATTTATGTAGCGAGCCCGGAAAGTCAGCAAATTCACGTTTGGAAATTAGATAGTATTTATGGGCTACT AGAATTAATACAGGTGATATATACTCACGGACAGGCACAACCTATGGCTGTGCATCCTAATAAGCGATTTTTGTATGTTG GAATACGTCCCAATTTTGGAATTACTACTTATCGTATCGATCAGATAGGTTTGTTAGCGGATCATGGGACAATTGGGATC TTCAGTAGCCCCACTCATTTGATTAGCGACAAAAAGGGTGCGTTTTTGTATTGCACATCTTATAGAAATAACACGGTGAG TGTGATTCCTATAAGTATGTCAGGAATGCTTCTTGATAGCCCTATACAAATTATAGAAGGCCTGTTAGGGTGTCATTCCG CAAATATAGATAAATTCAAAAAATTACTTTGGGTTCCTTGTTTGAAGGAAAATGCTATTAGGTTATTTAACATAAATTCG TTTGGAATGTTGACATCATACGATCCATCTATTATTAAAATTAATGTTGGTTCTGGTCCGCGTCATATGATTTTCTGTGA TTTCGATTGTTACGCATATGTCATTAATGAATTAACGAGTACTGTTGATGTTATAAAATATAATAATTTTCAAAAAATTC CAAGTATCGTTCAAACAGTAAGTATAATTCCTAAAAATATCAGCATTAACCGATGTTGGGCAGCTGATATACATATCACT CCTAATGGGCGTTGGTTATATTGTACTGATAGATCTATTAATATTATTAGTTGTTTGGAGATCTCTAAAAAGACAAAAAA ATTAAAATTTGTTGGTTATCAACTCACTGAAGAACAGCCGCGTGGTTTTGCAATTGATTATCAGGGAAAATTTTTAGTGG TCGCAGGTCAAAAATCAAATTGTATCTCTTTATATAAGATTGATTCAGATAATGGAACATTAACTATGTTGTCTCGTTAT TCATCAGGAAAGGGTCCTATGTGGGTTAGTATTATTACGTTGAATTGCAAATGA
Upstream 100 bases:
>100_bases AAAAATTAAAATAGGTTTGTAGTCCCATACTGAAATACGGTCACATACAGTATGATTTTTTATTTATATTTAATTACATT GTTATAAAACGAATAAATAT
Downstream 100 bases:
>100_bases GTATACAACAAAATCATTCATTCTTACACGATGATGGTCATGTAAAGCATAATTTTTTATAAGTATGATTTTTTATGTAC TTATAAATTAATAGTAAATT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6-P-gluconolactonase
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFGITTYRIDQIGLLADHGTIGI FSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDSPIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINS FGMLTSYDPSIIKINVGSGPRHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSNCISLYKIDSDNGTLTMLSRY SSGKGPMWVSIITLNCK
Sequences:
>Translated_337_residues MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFGITTYRIDQIGLLADHGTIGI FSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDSPIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINS FGMLTSYDPSIIKINVGSGPRHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSNCISLYKIDSDNGTLTMLSRY SSGKGPMWVSIITLNCK >Mature_337_residues MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFGITTYRIDQIGLLADHGTIGI FSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDSPIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINS FGMLTSYDPSIIKINVGSGPRHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSNCISLYKIDSDNGTLTMLSRY SSGKGPMWVSIITLNCK
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family
Homologues:
Organism=Escherichia coli, GI1786983, Length=332, Percent_Identity=45.4819277108434, Blast_Score=295, Evalue=2e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): 6PGL_BLOPB (Q492W6)
Other databases:
- EMBL: CP000016 - RefSeq: YP_277851.1 - ProteinModelPortal: Q492W6 - STRING: Q492W6 - GeneID: 3562808 - GenomeReviews: CP000016_GR - KEGG: bpn:BPEN_351 - eggNOG: COG2706 - HOGENOM: HBG741123 - OMA: NIEGCHA - ProtClustDB: PRK11028 - BioCyc: CBLO291272:BPEN_351-MONOMER - HAMAP: MF_01605 - InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR011045 - InterPro: IPR015943 - Gene3D: G3DSA:2.130.10.10
Pfam domain/function: PF10282 DUF2394; SSF50974 N2O_reductase_N
EC number: =3.1.1.31
Molecular weight: Translated: 37953; Mature: 37953
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFG CEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCC ITTYRIDQIGLLADHGTIGIFSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDS EEEEEEEEEEEEECCCEEEEECCCCHHCCCCCCCEEEEEECCCCEEEEEEEEECCEEECC PIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINSFGMLTSYDPSIIKINVGSGP HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCC RHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT CEEEEECCHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEC PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSN CCCCEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEECCEEEEEECCCCC CISLYKIDSDNGTLTMLSRYSSGKGPMWVSIITLNCK EEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECC >Mature Secondary Structure MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFG CEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCC ITTYRIDQIGLLADHGTIGIFSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDS EEEEEEEEEEEEECCCEEEEECCCCHHCCCCCCCEEEEEECCCCEEEEEEEEECCEEECC PIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINSFGMLTSYDPSIIKINVGSGP HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCC RHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT CEEEEECCHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEC PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSN CCCCEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEECCEEEEEECCCCC CISLYKIDSDNGTLTMLSRYSSGKGPMWVSIITLNCK EEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA