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The map label for this gene is tolR [H]

Identifier: 71892114

GI number: 71892114

Start: 410217

End: 410642

Strand: Direct

Name: tolR [H]

Synonym: BPEN_346

Alternate gene names: 71892114

Gene position: 410217-410642 (Clockwise)

Preceding gene: 71892113

Following gene: 71892115

Centisome position: 51.82

GC content: 28.87

Gene sequence:

>426_bases
ATGAAGAGAAAGCGTATCAGAAACACGATTAAGTCTGATATTAATATCATACCGTTTTTAGATATATTATTAGTTCTTTT
AATGATCTTTATGTTGATACCATCTAAATGGATACAAAGCTTTGAAGTAAATTTGCCAAATAGCCCAGTAACACCAAACA
TTATCAACAATGAAAAACTTATAATTACTATTGAAATTTTAGGAATGGGATTCTATAATCTCATTATTAATACTAAACAT
GTAGAGAAAGTGCGTTTAGACCAAATTTCATCAGAAATAAGTCATCAAACACACATCGCTCCTAATATAACGTGCTTGAT
CGCTGCTTCAAAAACTGTAGAATACGACGAAATAATTAAAGTATTGAATTTGTTAAATAAGATCGGTATAAATTCAATTG
GAATGATAACAAATCCTTCCGTTTGA

Upstream 100 bases:

>100_bases
ATGGATCAAGATTATCACAACTTTATAGAAGAATTTATTACGATTCTATATCATCAAATTTTTTTTAATATTGATTCTGC
GCTAAACAAGGAAAATCAAT

Downstream 100 bases:

>100_bases
ATACGGAACGATATTCTTACACAACTTGGATGATAATTATTAAATTTGTTTAATAGATATTACAAAAAATTTAGATCTGC
TGTTATGATATCAATCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKRKRIRNTIKSDINIIPFLDILLVLLMIFMLIPSKWIQSFEVNLPNSPVTPNIINNEKLIITIEILGMGFYNLIINTKH
VEKVRLDQISSEISHQTHIAPNITCLIAASKTVEYDEIIKVLNLLNKIGINSIGMITNPSV

Sequences:

>Translated_141_residues
MKRKRIRNTIKSDINIIPFLDILLVLLMIFMLIPSKWIQSFEVNLPNSPVTPNIINNEKLIITIEILGMGFYNLIINTKH
VEKVRLDQISSEISHQTHIAPNITCLIAASKTVEYDEIIKVLNLLNKIGINSIGMITNPSV
>Mature_141_residues
MKRKRIRNTIKSDINIIPFLDILLVLLMIFMLIPSKWIQSFEVNLPNSPVTPNIINNEKLIITIEILGMGFYNLIINTKH
VEKVRLDQISSEISHQTHIAPNITCLIAASKTVEYDEIIKVLNLLNKIGINSIGMITNPSV

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1786959, Length=130, Percent_Identity=39.2307692307692, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16002; Mature: 16002

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKRIRNTIKSDINIIPFLDILLVLLMIFMLIPSKWIQSFEVNLPNSPVTPNIINNEKL
CCHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCCCEECCCEE
IITIEILGMGFYNLIINTKHVEKVRLDQISSEISHQTHIAPNITCLIAASKTVEYDEIIK
EEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH
VLNLLNKIGINSIGMITNPSV
HHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRKRIRNTIKSDINIIPFLDILLVLLMIFMLIPSKWIQSFEVNLPNSPVTPNIINNEKL
CCHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCCCEECCCEE
IITIEILGMGFYNLIINTKHVEKVRLDQISSEISHQTHIAPNITCLIAASKTVEYDEIIK
EEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH
VLNLLNKIGINSIGMITNPSV
HHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8921895 [H]