Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is map [H]
Identifier: 71892052
GI number: 71892052
Start: 324077
End: 324859
Strand: Reverse
Name: map [H]
Synonym: BPEN_278
Alternate gene names: 71892052
Gene position: 324859-324077 (Counterclockwise)
Preceding gene: 71892071
Following gene: 229558494
Centisome position: 41.04
GC content: 32.57
Gene sequence:
>783_bases ATGAAAATTATTATTAAAACGCTTACAGATATAGCAAAGATGCGCGTCTCTGGGAAGTTAGCTGCAGAAGTGTTAGAAAT GATTGAAGCTTACGTGCAACCTGGTATTAGTACTGGAGAATTAGATACTATTTGCCATAATTATATTACACAAATACAAC ATGCTATTTCTGCTCCTCTTGGTTATCATGGATTTCCTAAATCTATTTGTACCTCAATTAATGAGGTAGTTTGTCATGGT ATTCCAAATAATTCACATAAATTAAAAGAAGGTGATATAATAAATATTGATATTACAGTAATTAAAGACGGATTATATGC TGATACTTCTAGAATGTTTATTGTTGGTCGACCAACAAAGTTGGGGTATCGATTATGTAAGATCACTCAAGAAAGTCTTT ATTTAGCAATTCGTATGATTAGACCAGGCATACGTTTAAAAAAAATAGGTCAATCTATCCAAAGATTTGTTGAAAGTCAA AATTTTTCAATAGTAAGAGAGTATTGTGGGCATGGAATTGGAAAATTTTTTCACGAAGCTCCCCATGTATTGCATTATGA TGCTGATGATGAAGGTGTGATATTAAAATCAGGCATGACATTAACAATAGAACCTATGGTAAATGCAGGTACTCGCCATA TTTATACTGAAAATGACGGATGGACAGTAAAAACAAAAGATCATAATTTGTCAGCGCAGTATGAACACACTATTGTTGTT ACAGAAAATGGGTGCGATGTATTAACGTTACGTTCCGATGAGTCTTTATCATCAATTATTTAA
Upstream 100 bases:
>100_bases TAATTTATCTCCATTAGTGCAATGATTTGTGTATGTAAATCATATGATGTAAAGGCAAAAATATTATGTATTTGTTAATA AAATTAATAATATATATATT
Downstream 100 bases:
>100_bases ATCATTATAATTAATAAAAAAGGTATGTGTTTTATTGCCAATCATTTTTAGAGATACTTGCATTTATATTAATAAATGAC TTTGAATAAGTACAAAAATA
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKIIIKTLTDIAKMRVSGKLAAEVLEMIEAYVQPGISTGELDTICHNYITQIQHAISAPLGYHGFPKSICTSINEVVCHG IPNNSHKLKEGDIINIDITVIKDGLYADTSRMFIVGRPTKLGYRLCKITQESLYLAIRMIRPGIRLKKIGQSIQRFVESQ NFSIVREYCGHGIGKFFHEAPHVLHYDADDEGVILKSGMTLTIEPMVNAGTRHIYTENDGWTVKTKDHNLSAQYEHTIVV TENGCDVLTLRSDESLSSII
Sequences:
>Translated_260_residues MKIIIKTLTDIAKMRVSGKLAAEVLEMIEAYVQPGISTGELDTICHNYITQIQHAISAPLGYHGFPKSICTSINEVVCHG IPNNSHKLKEGDIINIDITVIKDGLYADTSRMFIVGRPTKLGYRLCKITQESLYLAIRMIRPGIRLKKIGQSIQRFVESQ NFSIVREYCGHGIGKFFHEAPHVLHYDADDEGVILKSGMTLTIEPMVNAGTRHIYTENDGWTVKTKDHNLSAQYEHTIVV TENGCDVLTLRSDESLSSII >Mature_260_residues MKIIIKTLTDIAKMRVSGKLAAEVLEMIEAYVQPGISTGELDTICHNYITQIQHAISAPLGYHGFPKSICTSINEVVCHG IPNNSHKLKEGDIINIDITVIKDGLYADTSRMFIVGRPTKLGYRLCKITQESLYLAIRMIRPGIRLKKIGQSIQRFVESQ NFSIVREYCGHGIGKFFHEAPHVLHYDADDEGVILKSGMTLTIEPMVNAGTRHIYTENDGWTVKTKDHNLSAQYEHTIVV TENGCDVLTLRSDESLSSII
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=254, Percent_Identity=42.5196850393701, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI40385867, Length=254, Percent_Identity=37.007874015748, Blast_Score=180, Evalue=9e-46, Organism=Escherichia coli, GI1786364, Length=260, Percent_Identity=69.2307692307692, Blast_Score=395, Evalue=1e-111, Organism=Caenorhabditis elegans, GI71996291, Length=251, Percent_Identity=42.6294820717131, Blast_Score=217, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6323273, Length=254, Percent_Identity=43.3070866141732, Blast_Score=223, Evalue=3e-59, Organism=Drosophila melanogaster, GI21355531, Length=253, Percent_Identity=42.2924901185771, Blast_Score=212, Evalue=2e-55, Organism=Drosophila melanogaster, GI24583427, Length=245, Percent_Identity=41.2244897959184, Blast_Score=194, Evalue=4e-50,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29042; Mature: 29042
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIIKTLTDIAKMRVSGKLAAEVLEMIEAYVQPGISTGELDTICHNYITQIQHAISAPL CEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC GYHGFPKSICTSINEVVCHGIPNNSHKLKEGDIINIDITVIKDGLYADTSRMFIVGRPTK CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCEECCCCEEEEECCHH LGYRLCKITQESLYLAIRMIRPGIRLKKIGQSIQRFVESQNFSIVREYCGHGIGKFFHEA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHC PHVLHYDADDEGVILKSGMTLTIEPMVNAGTRHIYTENDGWTVKTKDHNLSAQYEHTIVV CCEEEECCCCCCEEEECCCEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEE TENGCDVLTLRSDESLSSII ECCCCCEEEEECCCHHHHCC >Mature Secondary Structure MKIIIKTLTDIAKMRVSGKLAAEVLEMIEAYVQPGISTGELDTICHNYITQIQHAISAPL CEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC GYHGFPKSICTSINEVVCHGIPNNSHKLKEGDIINIDITVIKDGLYADTSRMFIVGRPTK CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCEECCCCEEEEECCHH LGYRLCKITQESLYLAIRMIRPGIRLKKIGQSIQRFVESQNFSIVREYCGHGIGKFFHEA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHC PHVLHYDADDEGVILKSGMTLTIEPMVNAGTRHIYTENDGWTVKTKDHNLSAQYEHTIVV CCEEEECCCCCCEEEECCCEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEE TENGCDVLTLRSDESLSSII ECCCCCEEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]