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The map label for this gene is yfiO [H]

Identifier: 71891967

GI number: 71891967

Start: 233191

End: 233934

Strand: Reverse

Name: yfiO [H]

Synonym: BPEN_186

Alternate gene names: 71891967

Gene position: 233934-233191 (Counterclockwise)

Preceding gene: 71891972

Following gene: 71891966

Centisome position: 29.55

GC content: 26.48

Gene sequence:

>744_bases
ATGAGACGTATTCAATACTATATAATGACAATATTAATTATTAGTATCATTATGATTTCTTATGCCTCTGCTTCTGTTAA
CATTGTAAATGATGCTACTTATAATCTTTACAAATCCGCTCAAAACAAATTGTATAACGCTGATTATAAAGAAGCTACAC
AGGATTTGATAAATTTACTAAATTTATATCTATTAGATCCTTGTCCGCAACAAATTTATTTAGACTTAATTTATGCTTAT
TACAAATTAAACGATTTAAAATCTGCAAATAATTATATAGAACATTTCTTTAAATTATATCCTAATCATAAACATTTTGA
TTATGTATTATACATGCATGGCGTAATCAACATGTGCTTAGATGAAGATAATAAAAAATTAATAAAATATTTAAATATAA
ACTGGTTTGATCGTAATCCCATGTATGCATGTATAGCATTCCATACCTTTGTAAGACTTATACGCCAATATCCAGATAGT
CAATATTCTTTAGACGCTTACAAACGTTTAATTTTTTTAAAAAATAGAGTAGCTGAATATGAACTTTCCATTGTGAAATT
TTATTCTAAAAAACATGCTTATATATCAGTAATAGCTCGTGTAGAAAAAATGTTATATCACTTTCCAGATACTCAAGCAA
CTCGTAAAGCACTGTATTATATGCAGCAAGCTTATCAAAATATATATTTGCCAGATCAAGCTAACAAAGTAGCAAAAATC
ATTGCTGCTAATCCAGTATATTAA

Upstream 100 bases:

>100_bases
TTCAACCAAATTGTTGTATGCTGCATTCATTTAAATAAACGTACATACATATTATTTGCTAATATTTACATACTACTAAG
GAGTATTAATAAAAAGTTTT

Downstream 100 bases:

>100_bases
ATATATACTTTTATAAATATGATATCTATATCTATTTTTGTAGATATCAATATGATTGATACAATGTTTAAAACATGTAT
TAATTAAATTAATAATATAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRRIQYYIMTILIISIIMISYASASVNIVNDATYNLYKSAQNKLYNADYKEATQDLINLLNLYLLDPCPQQIYLDLIYAY
YKLNDLKSANNYIEHFFKLYPNHKHFDYVLYMHGVINMCLDEDNKKLIKYLNINWFDRNPMYACIAFHTFVRLIRQYPDS
QYSLDAYKRLIFLKNRVAEYELSIVKFYSKKHAYISVIARVEKMLYHFPDTQATRKALYYMQQAYQNIYLPDQANKVAKI
IAANPVY

Sequences:

>Translated_247_residues
MRRIQYYIMTILIISIIMISYASASVNIVNDATYNLYKSAQNKLYNADYKEATQDLINLLNLYLLDPCPQQIYLDLIYAY
YKLNDLKSANNYIEHFFKLYPNHKHFDYVLYMHGVINMCLDEDNKKLIKYLNINWFDRNPMYACIAFHTFVRLIRQYPDS
QYSLDAYKRLIFLKNRVAEYELSIVKFYSKKHAYISVIARVEKMLYHFPDTQATRKALYYMQQAYQNIYLPDQANKVAKI
IAANPVY
>Mature_247_residues
MRRIQYYIMTILIISIIMISYASASVNIVNDATYNLYKSAQNKLYNADYKEATQDLINLLNLYLLDPCPQQIYLDLIYAY
YKLNDLKSANNYIEHFFKLYPNHKHFDYVLYMHGVINMCLDEDNKKLIKYLNINWFDRNPMYACIAFHTFVRLIRQYPDS
QYSLDAYKRLIFLKNRVAEYELSIVKFYSKKHAYISVIARVEKMLYHFPDTQATRKALYYMQQAYQNIYLPDQANKVAKI
IAANPVY

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=244, Percent_Identity=42.2131147540984, Blast_Score=207, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29543; Mature: 29543

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIQYYIMTILIISIIMISYASASVNIVNDATYNLYKSAQNKLYNADYKEATQDLINLL
CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NLYLLDPCPQQIYLDLIYAYYKLNDLKSANNYIEHFFKLYPNHKHFDYVLYMHGVINMCL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DEDNKKLIKYLNINWFDRNPMYACIAFHTFVRLIRQYPDSQYSLDAYKRLIFLKNRVAEY
CCCCHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ELSIVKFYSKKHAYISVIARVEKMLYHFPDTQATRKALYYMQQAYQNIYLPDQANKVAKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IAANPVY
HHCCCCC
>Mature Secondary Structure
MRRIQYYIMTILIISIIMISYASASVNIVNDATYNLYKSAQNKLYNADYKEATQDLINLL
CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NLYLLDPCPQQIYLDLIYAYYKLNDLKSANNYIEHFFKLYPNHKHFDYVLYMHGVINMCL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DEDNKKLIKYLNINWFDRNPMYACIAFHTFVRLIRQYPDSQYSLDAYKRLIFLKNRVAEY
CCCCHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ELSIVKFYSKKHAYISVIARVEKMLYHFPDTQATRKALYYMQQAYQNIYLPDQANKVAKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IAANPVY
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]