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The map label for this gene is 68535981

Identifier: 68535981

GI number: 68535981

Start: 1081989

End: 1082726

Strand: Direct

Name: 68535981

Synonym: jk0904

Alternate gene names: NA

Gene position: 1081989-1082726 (Clockwise)

Preceding gene: 68535980

Following gene: 68535982

Centisome position: 43.94

GC content: 63.55

Gene sequence:

>738_bases
GTGAGCGCACAGAGAAGCCACGCTAGCGCTCCTGCACCTTCCTCCTCACCAGCCGGAAAGGTTCTTCCCACCTCGTCCAT
CGGCGATGTGCTGAAGCAGCTGAAGCCGGACTTTCCGGACGTCACCGTCTCGAAGATCCGCTTCCTGGAATCTGAAGGCT
TGGTCAGCCCGCGCCGTTCCCAGAGCGGCTACCGGCGCTTTTCCCCGGAGGATATTTCCAGGCTGCGCTACATTCTGACC
CTCCAGCGGGATAACTACCTTCCGCTGAAGGTTATCCGCGAACGCTTGGAGGCCATGGACTCCGGCAAGGTCACCCCGGT
GACCGCCGCCCGCAAGTCTGCCCCCGGTGCGATTTCTCCGGAGCAGATGCGGGCCACGCAGTCCCGCCGCCTGACTCGCG
CGGACGTTACGGCGCGCGCCAACGTGCAGGATTCCTTCACCGGATCCCTGATCCGCATGGGGCTGATCTCCGCTGACCCG
GCCGGTTTCTTCTCGGTCGATGACGTAGAGATCGTGCAGATTGCACAGAACCTGACCGACCACGGCCTGGACAACCGCCA
CCTGAAGGCACTGCTGACCATCGCGAACCGCCAGTTCGACATGGTTTCCCGCATCGCCTCCCCGCTGGCTCATGGCCGCG
ACGAGAACGCCCAGCAGCGTTCCGCCGAGACCGCCCGCGAGATGTCTGCGCTGATCATTTCCCTCAACACCGCGCTGGTG
AAGGGCAACCTTGGCTAA

Upstream 100 bases:

>100_bases
TGAGCCGAAGAACTCCTCGGTTCTGTCTAATGGCGACGAGATCCAGATCGGCAAGTTCCGCCTGGTGTTCCTGAACGGTT
CGAAGGAAGCCTAAGGAACA

Downstream 100 bases:

>100_bases
AGGCACCGAAGTCGTCTTTCTCGGCCGCGCTGTCGGTAGCTCGCTCGGCTGCGGCGCGCCCGTGCCCGACTGTCTTATTT
TTATGACCCCCCAGCGCACC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSAQRSHASAPAPSSSPAGKVLPTSSIGDVLKQLKPDFPDVTVSKIRFLESEGLVSPRRSQSGYRRFSPEDISRLRYILT
LQRDNYLPLKVIRERLEAMDSGKVTPVTAARKSAPGAISPEQMRATQSRRLTRADVTARANVQDSFTGSLIRMGLISADP
AGFFSVDDVEIVQIAQNLTDHGLDNRHLKALLTIANRQFDMVSRIASPLAHGRDENAQQRSAETAREMSALIISLNTALV
KGNLG

Sequences:

>Translated_245_residues
MSAQRSHASAPAPSSSPAGKVLPTSSIGDVLKQLKPDFPDVTVSKIRFLESEGLVSPRRSQSGYRRFSPEDISRLRYILT
LQRDNYLPLKVIRERLEAMDSGKVTPVTAARKSAPGAISPEQMRATQSRRLTRADVTARANVQDSFTGSLIRMGLISADP
AGFFSVDDVEIVQIAQNLTDHGLDNRHLKALLTIANRQFDMVSRIASPLAHGRDENAQQRSAETAREMSALIISLNTALV
KGNLG
>Mature_244_residues
SAQRSHASAPAPSSSPAGKVLPTSSIGDVLKQLKPDFPDVTVSKIRFLESEGLVSPRRSQSGYRRFSPEDISRLRYILTL
QRDNYLPLKVIRERLEAMDSGKVTPVTAARKSAPGAISPEQMRATQSRRLTRADVTARANVQDSFTGSLIRMGLISADPA
GFFSVDDVEIVQIAQNLTDHGLDNRHLKALLTIANRQFDMVSRIASPLAHGRDENAQQRSAETAREMSALIISLNTALVK
GNLG

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 26733; Mature: 26602

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQRSHASAPAPSSSPAGKVLPTSSIGDVLKQLKPDFPDVTVSKIRFLESEGLVSPRRS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC
QSGYRRFSPEDISRLRYILTLQRDNYLPLKVIRERLEAMDSGKVTPVTAARKSAPGAISP
CCCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCH
EQMRATQSRRLTRADVTARANVQDSFTGSLIRMGLISADPAGFFSVDDVEIVQIAQNLTD
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
HGLDNRHLKALLTIANRQFDMVSRIASPLAHGRDENAQQRSAETAREMSALIISLNTALV
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE
KGNLG
CCCCC
>Mature Secondary Structure 
SAQRSHASAPAPSSSPAGKVLPTSSIGDVLKQLKPDFPDVTVSKIRFLESEGLVSPRRS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC
QSGYRRFSPEDISRLRYILTLQRDNYLPLKVIRERLEAMDSGKVTPVTAARKSAPGAISP
CCCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCH
EQMRATQSRRLTRADVTARANVQDSFTGSLIRMGLISADPAGFFSVDDVEIVQIAQNLTD
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
HGLDNRHLKALLTIANRQFDMVSRIASPLAHGRDENAQQRSAETAREMSALIISLNTALV
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEE
KGNLG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]