| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is mraW
Identifier: 68535817
GI number: 68535817
Start: 885124
End: 886152
Strand: Direct
Name: mraW
Synonym: jk0742
Alternate gene names: 68535817
Gene position: 885124-886152 (Clockwise)
Preceding gene: 68535816
Following gene: 68535818
Centisome position: 35.94
GC content: 61.32
Gene sequence:
>1029_bases ATGAGCGAAGAACACGGCCACACCCCAGTCATGCGCGACCGCATGGTCGAACTCGTAGGTCTGGGTGTGAACAGCGAGAA CGCGCCCGCCCGCCCCGTCATCGTCGACGGCACCCTCGGCGCCGGCGGACACAGCGAGGCTTTTCTTGACGCCTTTCCTC ACGCAATTGTCGTCGGCCTGGACCGCGACCCCAATGCACTGGCAGAAGCTAATGCGCGTCTGGCACGCTTCGGGGACCGC TTTGTGTCCTATCAAACCCGTTTCGACGGAGTAACCGAGGCGCTGGAGGACCTGATGGAACAGGGCAAGCTTCCAGCCAG CGTGCGGGAACACGGTATCTCCGGGTTCCTGTTCGACCTCGGCGTGTCCTCCATGCAGCTGGATCAGCCGGAACGTGGCT TCGCCTATGCGGTAGACGCTCCGTTGGACATGCGCATGGATCCCAGCAGTCCGCTGACCGCCGCCGAGATCCTGAACACC TACAGTCACGGCGAGATCGCGCGCATTTTGAAGACCTACGGCGATGAACGCTTCGCCGGAAAGATTGCCTCCGCAGTTGT CCGCGAGCGTGAAAAGCAGCCCTTCGAGAACTCAGCGCGTTTGGTGGAGCTGTTGTACGCAACCATTCCGGCGGCATCGC GCCGCACCGGCGGACACCCAGCGAAGCGAACCTTCCAGGCGCTGCGCGTCGAGGTAAACGCTGAACTCGAATCGCTGGAG AACCTCATTCCGGAGATTTCCCGCTGGCTACATGTTGGTGCCGTGGGAGTGTTTATGAGCTACCAGTCGCTGGAAGACAA GATCGTCAAGAAAGCGTTGGTGCAGCTCAGTACCTCGAAAACTCCGCCGGGGCTACCGATGGAGCTGCCCGGCATGGAGG CCGAGTTCGAGCTCAGAACCCGTGGGGCAGAAAAGGCCAGCGAGGCGGAGATTGAACAAAACTCCCGGGCCGCCCCTGTG CGGGTGAGGGCCTACAGCAGGGTTAGTGACAGAGGAAAAACGATATTTCCGCTGGACACGCCCAGTTAG
Upstream 100 bases:
>100_bases CACATAAGTATTTATGTGGCACATGAATTGTTTGGAGCCCCAGAAAAGGCTTGTGAACAGGGTCGAAGACAAAACGCAGT GAAGGAAGGAGGGAACATCG
Downstream 100 bases:
>100_bases CTAAGCAAAACCCCTAAATGCCACTGATAGAAACAGACCCGAACCTACCGAAACTTCGGAAGGAATCACATGACAGCACC AGGCACCATCCGCACCCGAG
Product: S-adenosyl-methyltransferase MraW
Products: NA
Alternate protein names: 16S rRNA m(4)C1402 methyltransferase; rRNA (cytosine-N(4)-)-methyltransferase RsmH
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSEEHGHTPVMRDRMVELVGLGVNSENAPARPVIVDGTLGAGGHSEAFLDAFPHAIVVGLDRDPNALAEANARLARFGDR FVSYQTRFDGVTEALEDLMEQGKLPASVREHGISGFLFDLGVSSMQLDQPERGFAYAVDAPLDMRMDPSSPLTAAEILNT YSHGEIARILKTYGDERFAGKIASAVVREREKQPFENSARLVELLYATIPAASRRTGGHPAKRTFQALRVEVNAELESLE NLIPEISRWLHVGAVGVFMSYQSLEDKIVKKALVQLSTSKTPPGLPMELPGMEAEFELRTRGAEKASEAEIEQNSRAAPV RVRAYSRVSDRGKTIFPLDTPS
Sequences:
>Translated_342_residues MSEEHGHTPVMRDRMVELVGLGVNSENAPARPVIVDGTLGAGGHSEAFLDAFPHAIVVGLDRDPNALAEANARLARFGDR FVSYQTRFDGVTEALEDLMEQGKLPASVREHGISGFLFDLGVSSMQLDQPERGFAYAVDAPLDMRMDPSSPLTAAEILNT YSHGEIARILKTYGDERFAGKIASAVVREREKQPFENSARLVELLYATIPAASRRTGGHPAKRTFQALRVEVNAELESLE NLIPEISRWLHVGAVGVFMSYQSLEDKIVKKALVQLSTSKTPPGLPMELPGMEAEFELRTRGAEKASEAEIEQNSRAAPV RVRAYSRVSDRGKTIFPLDTPS >Mature_341_residues SEEHGHTPVMRDRMVELVGLGVNSENAPARPVIVDGTLGAGGHSEAFLDAFPHAIVVGLDRDPNALAEANARLARFGDRF VSYQTRFDGVTEALEDLMEQGKLPASVREHGISGFLFDLGVSSMQLDQPERGFAYAVDAPLDMRMDPSSPLTAAEILNTY SHGEIARILKTYGDERFAGKIASAVVREREKQPFENSARLVELLYATIPAASRRTGGHPAKRTFQALRVEVNAELESLEN LIPEISRWLHVGAVGVFMSYQSLEDKIVKKALVQLSTSKTPPGLPMELPGMEAEFELRTRGAEKASEAEIEQNSRAAPVR VRAYSRVSDRGKTIFPLDTPS
Specific function: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
COG id: COG0275
COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RsmH family
Homologues:
Organism=Homo sapiens, GI165377209, Length=286, Percent_Identity=37.0629370629371, Blast_Score=158, Evalue=5e-39, Organism=Homo sapiens, GI165377202, Length=204, Percent_Identity=38.2352941176471, Blast_Score=119, Evalue=4e-27, Organism=Escherichia coli, GI1786270, Length=334, Percent_Identity=37.125748502994, Blast_Score=177, Evalue=7e-46, Organism=Drosophila melanogaster, GI62472493, Length=300, Percent_Identity=33, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI28571637, Length=300, Percent_Identity=33, Blast_Score=138, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RSMH_CORJK (Q4JWA3)
Other databases:
- EMBL: CR931997 - RefSeq: YP_250522.1 - ProteinModelPortal: Q4JWA3 - SMR: Q4JWA3 - STRING: Q4JWA3 - GeneID: 3432488 - GenomeReviews: CR931997_GR - KEGG: cjk:jk0742 - NMPDR: fig|306537.3.peg.1514 - eggNOG: COG0275 - HOGENOM: HBG302779 - OMA: RPINSTL - ProtClustDB: PRK00050 - BioCyc: CJEI306537:JK0742-MONOMER - GO: GO:0005737 - HAMAP: MF_01007 - InterPro: IPR002903 - PANTHER: PTHR11265 - PIRSF: PIRSF004486 - TIGRFAMs: TIGR00006
Pfam domain/function: PF01795 Methyltransf_5
EC number: NA
Molecular weight: Translated: 37455; Mature: 37324
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: BINDING 61-61 BINDING 88-88 BINDING 119-119 BINDING 126-126
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEHGHTPVMRDRMVELVGLGVNSENAPARPVIVDGTLGAGGHSEAFLDAFPHAIVVGL CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCEEEEEC DRDPNALAEANARLARFGDRFVSYQTRFDGVTEALEDLMEQGKLPASVREHGISGFLFDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEHHHH GVSSMQLDQPERGFAYAVDAPLDMRMDPSSPLTAAEILNTYSHGEIARILKTYGDERFAG CCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHH KIASAVVREREKQPFENSARLVELLYATIPAASRRTGGHPAKRTFQALRVEVNAELESLE HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCHHHHHHH NLIPEISRWLHVGAVGVFMSYQSLEDKIVKKALVQLSTSKTPPGLPMELPGMEAEFELRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH RGAEKASEAEIEQNSRAAPVRVRAYSRVSDRGKTIFPLDTPS CCCCHHHHHHHHHCCCCCCEEEHHHHHHHCCCCEEECCCCCC >Mature Secondary Structure SEEHGHTPVMRDRMVELVGLGVNSENAPARPVIVDGTLGAGGHSEAFLDAFPHAIVVGL CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCEEEEEC DRDPNALAEANARLARFGDRFVSYQTRFDGVTEALEDLMEQGKLPASVREHGISGFLFDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEHHHH GVSSMQLDQPERGFAYAVDAPLDMRMDPSSPLTAAEILNTYSHGEIARILKTYGDERFAG CCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHH KIASAVVREREKQPFENSARLVELLYATIPAASRRTGGHPAKRTFQALRVEVNAELESLE HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCHHHHHHH NLIPEISRWLHVGAVGVFMSYQSLEDKIVKKALVQLSTSKTPPGLPMELPGMEAEFELRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH RGAEKASEAEIEQNSRAAPVRVRAYSRVSDRGKTIFPLDTPS CCCCHHHHHHHHHCCCCCCEEEHHHHHHHCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA