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The map label for this gene is qcrC [H]

Identifier: 68535795

GI number: 68535795

Start: 860105

End: 861004

Strand: Direct

Name: qcrC [H]

Synonym: jk0720

Alternate gene names: 68535795

Gene position: 860105-861004 (Clockwise)

Preceding gene: 68535794

Following gene: 68535796

Centisome position: 34.93

GC content: 60.78

Gene sequence:

>900_bases
ATGGATATCAACTCCACCAACGCAACCACGGAGCAAGTCTCCAGTGGTTCGAAGGGCAGTGCCGCCAAGGCACGCCGCCG
CCGGAAGGTCCGCAAGGCCTTCGCCGGCGCGTTGGCATTGCTGTTCGCGCTTACGGGCGCGGGCTTCCTCGCCAACGCAT
TGACCCCTGATGCGCAGAACGCAGTTGCCGAGCAGAACTCGGAAGAGCTGGCGCAGCAGGGTAAGGAAATTTACGAGGTT
GCTTGTATCACCTGCCACGGTGGCAACCTGCAGGGCGTTAAGGATCGCGGTCCTTCCCTGATTGGTGTCGGTGAAGGCGC
TGTGTACTTCCAGGTACACTCCGGCCGCATGCCGATGCTGCGCAACGAGGCGCAGGCCAAGCGTAAGCCTCCGCGCTACT
CCGAGCAGCAGGCTCTGGCGCTGGCAGCTTACGTCAACGCTAATGGCGGCGGCCCGAGTATCGTCCGCGATGCTAACGGC
GAGATTGCAATGGAGTCCCTGCGTGGTGCCAACAACAAGGACGGTGAGATTGACCCGGCAGACGTTGCCCGTGGTTCCGA
TCTGTTCCGCCTGAACTGTGCATCTTGCCACAACTTCACCGGTAAGGGTGGCGCACTCTCCAGTGGTAAGTACGCACCGC
CGCTGGGCCCTGCTAACGAGCAGGAGATCTACCAGGCTATGCTGACCGGCCCGCAAAACATGCCAAAGTTCTCCGATCGC
CAGCTGACGGCTGACGAGAAGAAGGACATCATTGCCTACATCAAGTCGGCCAAGGAATCCCCGAACCCGGGTGGCTTCGG
TCTGGGCGGTATCGGCCCGGTGACTGAGGGCATGGTCATGTGGTTTATCGGCATCGTGGTTCTCGTTGCCTTCGCTATGT
GGATTGGATCGCGGTCATGA

Upstream 100 bases:

>100_bases
TACTTCATTCAGTAGGCCGGCCAGGCCGGTTCTTCTCCTGTAGAAGAGAGTCGGCCTACAGCCCATCGCAATTCCATTGA
CTAGCAAATAAGGGAACAAG

Downstream 100 bases:

>100_bases
GTGAGAACAACAAGAAGTACAGCAACGAAGAGCTGTCGAAGATGAGCAACGACGAGCTGGCCCGCCTGGGTACCGAGCTC
GACGGCGTTACGGTTGCGTA

Product: ubiquinol-cytochrome C reductase cytochrome C subunit

Products: NA

Alternate protein names: Cytochrome bc1 complex cytochrome c subunit [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MDINSTNATTEQVSSGSKGSAAKARRRRKVRKAFAGALALLFALTGAGFLANALTPDAQNAVAEQNSEELAQQGKEIYEV
ACITCHGGNLQGVKDRGPSLIGVGEGAVYFQVHSGRMPMLRNEAQAKRKPPRYSEQQALALAAYVNANGGGPSIVRDANG
EIAMESLRGANNKDGEIDPADVARGSDLFRLNCASCHNFTGKGGALSSGKYAPPLGPANEQEIYQAMLTGPQNMPKFSDR
QLTADEKKDIIAYIKSAKESPNPGGFGLGGIGPVTEGMVMWFIGIVVLVAFAMWIGSRS

Sequences:

>Translated_299_residues
MDINSTNATTEQVSSGSKGSAAKARRRRKVRKAFAGALALLFALTGAGFLANALTPDAQNAVAEQNSEELAQQGKEIYEV
ACITCHGGNLQGVKDRGPSLIGVGEGAVYFQVHSGRMPMLRNEAQAKRKPPRYSEQQALALAAYVNANGGGPSIVRDANG
EIAMESLRGANNKDGEIDPADVARGSDLFRLNCASCHNFTGKGGALSSGKYAPPLGPANEQEIYQAMLTGPQNMPKFSDR
QLTADEKKDIIAYIKSAKESPNPGGFGLGGIGPVTEGMVMWFIGIVVLVAFAMWIGSRS
>Mature_299_residues
MDINSTNATTEQVSSGSKGSAAKARRRRKVRKAFAGALALLFALTGAGFLANALTPDAQNAVAEQNSEELAQQGKEIYEV
ACITCHGGNLQGVKDRGPSLIGVGEGAVYFQVHSGRMPMLRNEAQAKRKPPRYSEQQALALAAYVNANGGGPSIVRDANG
EIAMESLRGANNKDGEIDPADVARGSDLFRLNCASCHNFTGKGGALSSGKYAPPLGPANEQEIYQAMLTGPQNMPKFSDR
QLTADEKKDIIAYIKSAKESPNPGGFGLGGIGPVTEGMVMWFIGIVVLVAFAMWIGSRS

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR009152 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 31520; Mature: 31520

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINSTNATTEQVSSGSKGSAAKARRRRKVRKAFAGALALLFALTGAGFLANALTPDAQN
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHH
AVAEQNSEELAQQGKEIYEVACITCHGGNLQGVKDRGPSLIGVGEGAVYFQVHSGRMPML
HHHHCCHHHHHHHHHHEEEEEEEEECCCCCCCHHCCCCCEEEECCCEEEEEEECCCCCHH
RNEAQAKRKPPRYSEQQALALAAYVNANGGGPSIVRDANGEIAMESLRGANNKDGEIDPA
HCHHHHHCCCCCCCHHHHEEEEEEEECCCCCCCEEECCCCCCHHHHHCCCCCCCCCCCHH
DVARGSDLFRLNCASCHNFTGKGGALSSGKYAPPLGPANEQEIYQAMLTGPQNMPKFSDR
HHCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
QLTADEKKDIIAYIKSAKESPNPGGFGLGGIGPVTEGMVMWFIGIVVLVAFAMWIGSRS
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDINSTNATTEQVSSGSKGSAAKARRRRKVRKAFAGALALLFALTGAGFLANALTPDAQN
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHH
AVAEQNSEELAQQGKEIYEVACITCHGGNLQGVKDRGPSLIGVGEGAVYFQVHSGRMPML
HHHHCCHHHHHHHHHHEEEEEEEEECCCCCCCHHCCCCCEEEECCCEEEEEEECCCCCHH
RNEAQAKRKPPRYSEQQALALAAYVNANGGGPSIVRDANGEIAMESLRGANNKDGEIDPA
HCHHHHHCCCCCCCHHHHEEEEEEEECCCCCCCEEECCCCCCHHHHHCCCCCCCCCCCHH
DVARGSDLFRLNCASCHNFTGKGGALSSGKYAPPLGPANEQEIYQAMLTGPQNMPKFSDR
HHCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
QLTADEKKDIIAYIKSAKESPNPGGFGLGGIGPVTEGMVMWFIGIVVLVAFAMWIGSRS
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14602910 [H]