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The map label for this gene is tnp3504c3 [C]

Identifier: 68535772

GI number: 68535772

Start: 832619

End: 833539

Strand: Direct

Name: tnp3504c3 [C]

Synonym: jk0697

Alternate gene names: 68535772

Gene position: 832619-833539 (Clockwise)

Preceding gene: 68535771

Following gene: 68535778

Centisome position: 33.81

GC content: 53.75

Gene sequence:

>921_bases
ATGATCCGGTTCATCGATGAATACCGGAATCGTTTCTCTGTCGAGTTCATCTGTAAGACGTTGAAGGATAACCGGGCTGG
TGGGTTCATCACCTCGCGTGGGTATCGCCAGTCCAGGGCCCGTGGATTAAGTGCTCGCTGCCTTCGTGATGCTGTGCTGG
TTGAACGCATTGGTGCTATTCATCGGGATAATTACGGTGTCTACGGTGTACGGAAAATGTGGCATGCTCTTCATCGTGAC
GGAATCGATATCGGTCGTGAACAAACCGCGCGGCTGATGCGTCTAGCCGGTGTATCAGGCAAAGGCAAAGGCCGCTCGCC
TATGACCACTCGCACACCTCAAAGGCCGGATTTGCGCCCGGACTTGGTGGAGCGAGAATTCAAAGCCGAAGGCCCGAACA
AGCTGTGGGTGGCTGACATTACCTACGTTCGCACGAAGAAAGGCTTTGTGTACGCCGCATTTGTCACCGATGTTTACTCC
CGACGGATCGTTGGGTGGGCGTTATCAGATTCCATGCGCACCGAAGCGTTGCCGCTGCAAGCTCTCAACCAGGCGATCGC
GTGTGCTGAAGAAACAACAAGTCTCATTCACCATTCAGATCACGGCTCGCAGTATGTCAGCGTTGTCTACAACGAGCGTC
TTGCCCAGCACGGGATTGCCGCTTCCACCGGAACTGTCGGGGATTCCTATGACAATGCTCTGGCTGAAAACGTTAACGGC
TCCTACAAAAACGAGCTGATCCATACTCGCAGGTGGAATGACGTTGTCGAGGTAGAAATCGCGACGTTCGAGTGGGTGTC
ATGGTGGAACGAGACGAGGCTTCACCAAAGCTTGGGATACCGAACCCCAGTCGAAGTGGAAACCGAATTTTGGGAGCAGC
ACCCGCCGCAAGCAATAATAGAAATCAAGGCAAATGCCTAG

Upstream 100 bases:

>100_bases
CGAAGCTACGCCGTGAAATTCAAGAGCTACGCGACACCAATGAACTTTTAAAGGCTGTCTCAGCTTTTTTCGCGTCGGAA
CTCGACCCACAACGTCGGAA

Downstream 100 bases:

>100_bases
GAACAAAACCCGGGGCACTTCACTAGGATTCAAAAACCTCAACCACTACATCTTGCGGTGCCTGATCCACTCCGGACAAC
TACAGGACAAAATCAACACA

Product: transposase for IS3504c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAIHRDNYGVYGVRKMWHALHRD
GIDIGREQTARLMRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYS
RRIVGWALSDSMRTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNG
SYKNELIHTRRWNDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA

Sequences:

>Translated_306_residues
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAIHRDNYGVYGVRKMWHALHRD
GIDIGREQTARLMRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYS
RRIVGWALSDSMRTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNG
SYKNELIHTRRWNDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA
>Mature_306_residues
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAIHRDNYGVYGVRKMWHALHRD
GIDIGREQTARLMRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYS
RRIVGWALSDSMRTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNG
SYKNELIHTRRWNDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=247, Percent_Identity=44.1295546558704, Blast_Score=192, Evalue=3e-49,
Organism=Escherichia coli, GI1788405, Length=289, Percent_Identity=30.1038062283737, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1787263, Length=289, Percent_Identity=30.1038062283737, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786753, Length=289, Percent_Identity=30.1038062283737, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786570, Length=289, Percent_Identity=30.1038062283737, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786490, Length=289, Percent_Identity=30.1038062283737, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1789981, Length=237, Percent_Identity=27.8481012658228, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34927; Mature: 34927

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAI
CCCCHHHHCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCHHHHHHHHHHHHHHHHHH
HRDNYGVYGVRKMWHALHRDGIDIGREQTARLMRLAGVSGKGKGRSPMTTRTPQRPDLRP
HCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
DLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYSRRIVGWALSDSMRTEALPLQ
HHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEHHHHHHHHHHHHEEECCCCHHHHCCCHH
ALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCC
SYKNELIHTRRWNDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAII
HHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCEEE
EIKANA
EEECCC
>Mature Secondary Structure
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAI
CCCCHHHHCCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCHHHHHHHHHHHHHHHHHH
HRDNYGVYGVRKMWHALHRDGIDIGREQTARLMRLAGVSGKGKGRSPMTTRTPQRPDLRP
HCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
DLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYSRRIVGWALSDSMRTEALPLQ
HHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEHHHHHHHHHHHHEEECCCCHHHHCCCHH
ALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCC
SYKNELIHTRRWNDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAII
HHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCEEE
EIKANA
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]