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The map label for this gene is yybO [H]

Identifier: 68535753

GI number: 68535753

Start: 816793

End: 818091

Strand: Direct

Name: yybO [H]

Synonym: jk0678

Alternate gene names: 68535753

Gene position: 816793-818091 (Clockwise)

Preceding gene: 68535751

Following gene: 68535759

Centisome position: 33.17

GC content: 65.97

Gene sequence:

>1299_bases
GTGACTGCTAAGGATAAAGACAAACTCAGCGCTCGCGCGCTCATCGTGTGGGGAGCCGGGGTGCTGTGTTACACCCTGGC
GGTTACGGGACGCACCTCCTTCGGAGTGGCCAGCGTGGATGCGATCGATCGCTTCCACATTAACGCCGCCCAGTTGGCGG
TATTCACCTCGCTGCAGCTGGCGGTGTACGCCTTTGCGCAGATTCCAGTGGGTCTGCTGGTGGACCGCTTCGGGCCGCGC
AAGCTGATGGTCGCCGGTGCTTTCGTCATGGCGTTGGGGCAGGTCACGTTGGCTTTCACCACGAGTTATCCGGTGGCCAT
CTTCGCCCGCATGCTGATCGGCGCGGGCGATGCGACGGCCTTCCTGTCCGTGATGCGCCTGATCCCCGCGTGGATTCCGC
TGCGCCACGCGCCGCTGCTGGGGCAGCTTACGGGCGCGGTGGGGCAGTTTGGCCAGTTCCTATCCGCCGTGCCATTCCTG
AGTTTGTTGCACGCGACCAGCTGGCAGACCGGCTTCGTGAGCCTCGGCGCCGTCGGCGCGCTATTGGCACTGGCTGCGGG
CGTGCTGGTGAAGGACTCGCCGGAGCCTGAGGCAGAGCTGGAGTCGGCGGCGCACGGCAAGCCCGCCGGGTCTACTGGGC
CTACTGAGTCTGCCGAGCGCCTGGGCGTCAAGAAAGTCCTGGCCAATGTGTTGACCAACCGCGTTTGCTGGCACGGCTTC
TTCGTCCACTGGACGGGCCTGGGCGCGTTGGTGGTGTTCACCCTGCTGTGGGGTCTGCCGATCATGACCCTCGGACTCGG
CCTGCCCGCCGACCAGGCCGGGCTGGCGCTCTCGCTGGGCACGCTGGCCTCCGTGGCGGTCGGCCCGATCGTGGGCCTGC
TGTCCGCGCGCTTCTACAACCGCCGTATGCAGATTGTGATGATCTTCTCCATCACCGGCTGGCTGGGCTGGCTGTGGTTC
TTCACCTCCGCACCGACGGGCGTGCTGTGGGCAGCGTGCCTAATGAACATCGTCATGGGCTTCACCGGCCCGGTCGCGAA
CTTGGGCTTCGACTCCGTGCGCGAGAAGGTGGACCGCCGCTTCGTCGCCACCGGCACAGGCCTGGCGAATATGGGTGGCT
GGATCGCGGGAATGATCGGAGCCCAGGCCGTCGGTGTGCTGCTGAACCTGCGCGCCCCGGACGGCAACTACGACTGGGCG
GACTTCGGCATGGCCTGGATTGCGGTGGCTACCGTATGGGCCTGCGGTTTCTGCGGAATGTGGCTCACGCGCGATCGCAA
CGTGCGCCGTTACTCTTAA

Upstream 100 bases:

>100_bases
GGCCACAACGGCGGCCAGAACGCGGCGGCGATTAGTGAAGGGGCGGGTAAAGCTCATGGTGAGTAAGTCTATCCATAACC
CACGGAGTAGCGTGAGGTGA

Downstream 100 bases:

>100_bases
GCCCTTTTCCTCAGGCTTTTTCCTTAAGACGTTCTTTCTTTGTGACGCCCTCAGCCTCCCGCTTCTTCAAGGGTTGCGAC
TTGAGGCCGGCGTGGATAGT

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MTAKDKDKLSARALIVWGAGVLCYTLAVTGRTSFGVASVDAIDRFHINAAQLAVFTSLQLAVYAFAQIPVGLLVDRFGPR
KLMVAGAFVMALGQVTLAFTTSYPVAIFARMLIGAGDATAFLSVMRLIPAWIPLRHAPLLGQLTGAVGQFGQFLSAVPFL
SLLHATSWQTGFVSLGAVGALLALAAGVLVKDSPEPEAELESAAHGKPAGSTGPTESAERLGVKKVLANVLTNRVCWHGF
FVHWTGLGALVVFTLLWGLPIMTLGLGLPADQAGLALSLGTLASVAVGPIVGLLSARFYNRRMQIVMIFSITGWLGWLWF
FTSAPTGVLWAACLMNIVMGFTGPVANLGFDSVREKVDRRFVATGTGLANMGGWIAGMIGAQAVGVLLNLRAPDGNYDWA
DFGMAWIAVATVWACGFCGMWLTRDRNVRRYS

Sequences:

>Translated_432_residues
MTAKDKDKLSARALIVWGAGVLCYTLAVTGRTSFGVASVDAIDRFHINAAQLAVFTSLQLAVYAFAQIPVGLLVDRFGPR
KLMVAGAFVMALGQVTLAFTTSYPVAIFARMLIGAGDATAFLSVMRLIPAWIPLRHAPLLGQLTGAVGQFGQFLSAVPFL
SLLHATSWQTGFVSLGAVGALLALAAGVLVKDSPEPEAELESAAHGKPAGSTGPTESAERLGVKKVLANVLTNRVCWHGF
FVHWTGLGALVVFTLLWGLPIMTLGLGLPADQAGLALSLGTLASVAVGPIVGLLSARFYNRRMQIVMIFSITGWLGWLWF
FTSAPTGVLWAACLMNIVMGFTGPVANLGFDSVREKVDRRFVATGTGLANMGGWIAGMIGAQAVGVLLNLRAPDGNYDWA
DFGMAWIAVATVWACGFCGMWLTRDRNVRRYS
>Mature_431_residues
TAKDKDKLSARALIVWGAGVLCYTLAVTGRTSFGVASVDAIDRFHINAAQLAVFTSLQLAVYAFAQIPVGLLVDRFGPRK
LMVAGAFVMALGQVTLAFTTSYPVAIFARMLIGAGDATAFLSVMRLIPAWIPLRHAPLLGQLTGAVGQFGQFLSAVPFLS
LLHATSWQTGFVSLGAVGALLALAAGVLVKDSPEPEAELESAAHGKPAGSTGPTESAERLGVKKVLANVLTNRVCWHGFF
VHWTGLGALVVFTLLWGLPIMTLGLGLPADQAGLALSLGTLASVAVGPIVGLLSARFYNRRMQIVMIFSITGWLGWLWFF
TSAPTGVLWAACLMNIVMGFTGPVANLGFDSVREKVDRRFVATGTGLANMGGWIAGMIGAQAVGVLLNLRAPDGNYDWAD
FGMAWIAVATVWACGFCGMWLTRDRNVRRYS

Specific function: Uptake Of D-Galactarate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI1789515, Length=397, Percent_Identity=23.4256926952141, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45838; Mature: 45707

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKDKDKLSARALIVWGAGVLCYTLAVTGRTSFGVASVDAIDRFHINAAQLAVFTSLQL
CCCCCCHHHHHEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
AVYAFAQIPVGLLVDRFGPRKLMVAGAFVMALGQVTLAFTTSYPVAIFARMLIGAGDATA
HHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHCCCCHHH
FLSVMRLIPAWIPLRHAPLLGQLTGAVGQFGQFLSAVPFLSLLHATSWQTGFVSLGAVGA
HHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LLALAAGVLVKDSPEPEAELESAAHGKPAGSTGPTESAERLGVKKVLANVLTNRVCWHGF
HHHHHHCHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FVHWTGLGALVVFTLLWGLPIMTLGLGLPADQAGLALSLGTLASVAVGPIVGLLSARFYN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
RRMQIVMIFSITGWLGWLWFFTSAPTGVLWAACLMNIVMGFTGPVANLGFDSVREKVDRR
CCEEEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH
FVATGTGLANMGGWIAGMIGAQAVGVLLNLRAPDGNYDWADFGMAWIAVATVWACGFCGM
HHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
WLTRDRNVRRYS
HHCCCCCCCCCC
>Mature Secondary Structure 
TAKDKDKLSARALIVWGAGVLCYTLAVTGRTSFGVASVDAIDRFHINAAQLAVFTSLQL
CCCCCHHHHHEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
AVYAFAQIPVGLLVDRFGPRKLMVAGAFVMALGQVTLAFTTSYPVAIFARMLIGAGDATA
HHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHCCCCHHH
FLSVMRLIPAWIPLRHAPLLGQLTGAVGQFGQFLSAVPFLSLLHATSWQTGFVSLGAVGA
HHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LLALAAGVLVKDSPEPEAELESAAHGKPAGSTGPTESAERLGVKKVLANVLTNRVCWHGF
HHHHHHCHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FVHWTGLGALVVFTLLWGLPIMTLGLGLPADQAGLALSLGTLASVAVGPIVGLLSARFYN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
RRMQIVMIFSITGWLGWLWFFTSAPTGVLWAACLMNIVMGFTGPVANLGFDSVREKVDRR
CCEEEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH
FVATGTGLANMGGWIAGMIGAQAVGVLLNLRAPDGNYDWADFGMAWIAVATVWACGFCGM
HHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
WLTRDRNVRRYS
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]