| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is gluB [H]
Identifier: 68535730
GI number: 68535730
Start: 789607
End: 790503
Strand: Direct
Name: gluB [H]
Synonym: jk0655
Alternate gene names: 68535730
Gene position: 789607-790503 (Clockwise)
Preceding gene: 68535729
Following gene: 68535731
Centisome position: 32.07
GC content: 61.65
Gene sequence:
>897_bases ATGTCTACCTTCAAAAGCGCACTCAAGCGCCTCACCGCTGCAGTGGTTGCCACCGCAAGTGTGGTGGCGCTGACCGCGTG CGGCTCTGGCGGTGCCCGCGACCTGCTGGCGGATATCGAATCCGGCCACGTCGTGATGGGCACCAAGTACGACCAACCGA ACCTGGGCGAGCGCACCCCGGACAAGCAGTTCGCCGGCCTGGACACCGACGTATCCCGCTACGTGGTGGAATACATCGCG AAGAAGCACGGCTGGGCCACACCAGAAATCGAATGGCGCGAAACCCCCTCCGCGCAGCGCGAGACCCTCATCAACAACGG TGAGGTCAACATGATCACCGCCACGTACTCCATCAACAAAGGCCGCCTGAAGGCCGTGGACTTCGCAGGCCCGTACGTGG TCACCCACCAGGCGCTGCTGGTTCGCGAGGATTCCGGCATCAACGGCCTGAACGACATCGCGCCGGGCACCCGCCTGTGC TCCGTATCTGGCTCCACCCCGGCACAGAAGGTGAAGGACGCGCTGCCAGAAGTGCAGCTGCAGGAGTTCGACACCTACGC CGCGTGTGCGGAAGGCCTGAAGCAGGGCGTGGTGGACGCAACCACCACGGACGCGACCATTCTGGCTGGCTTCGCACAGC GCTACAAGGAGCGATTCGACGAAGACTACAGCGTCATCCAACTAAAGAACGATGACGGCAGCTTCTGGACCAACGAAAAC TACGGCATCGGCCTGCCCAAGGGCGACGACAAAGCCAAAGCCGAGGTCAACGAAGCGCTGAACGAAATGCACGATTCCGG CGAGTTCCAAAAGATCGTCGCCAAGAACCTGGGCGACAACGTGGATATCGGCGAAAAGCCAAAGATCGGCGACCTGTCGT TCGTCGACGAGAAGTAG
Upstream 100 bases:
>100_bases GACGCCGACCCGGAGACCTTCTTCACGAACCCGCAATCCGATCGCGCCAAGGACTTCCTGGCGAAGATCGTGAACCACTA GTTCGGGAAGCGAGTTACAC
Downstream 100 bases:
>100_bases AAAGGAGGAACGCACTATGAACCCCGAACTATGGTCCGAGATGAAGCCCGAACTGCTCCCAGCATTTTGGGTGACCGTCA AGTTGACGTTCTTCTCCGCG
Product: glutamate ABC transport system, solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSTFKSALKRLTAAVVATASVVALTACGSGGARDLLADIESGHVVMGTKYDQPNLGERTPDKQFAGLDTDVSRYVVEYIA KKHGWATPEIEWRETPSAQRETLINNGEVNMITATYSINKGRLKAVDFAGPYVVTHQALLVREDSGINGLNDIAPGTRLC SVSGSTPAQKVKDALPEVQLQEFDTYAACAEGLKQGVVDATTTDATILAGFAQRYKERFDEDYSVIQLKNDDGSFWTNEN YGIGLPKGDDKAKAEVNEALNEMHDSGEFQKIVAKNLGDNVDIGEKPKIGDLSFVDEK
Sequences:
>Translated_298_residues MSTFKSALKRLTAAVVATASVVALTACGSGGARDLLADIESGHVVMGTKYDQPNLGERTPDKQFAGLDTDVSRYVVEYIA KKHGWATPEIEWRETPSAQRETLINNGEVNMITATYSINKGRLKAVDFAGPYVVTHQALLVREDSGINGLNDIAPGTRLC SVSGSTPAQKVKDALPEVQLQEFDTYAACAEGLKQGVVDATTTDATILAGFAQRYKERFDEDYSVIQLKNDDGSFWTNEN YGIGLPKGDDKAKAEVNEALNEMHDSGEFQKIVAKNLGDNVDIGEKPKIGDLSFVDEK >Mature_297_residues STFKSALKRLTAAVVATASVVALTACGSGGARDLLADIESGHVVMGTKYDQPNLGERTPDKQFAGLDTDVSRYVVEYIAK KHGWATPEIEWRETPSAQRETLINNGEVNMITATYSINKGRLKAVDFAGPYVVTHQALLVREDSGINGLNDIAPGTRLCS VSGSTPAQKVKDALPEVQLQEFDTYAACAEGLKQGVVDATTTDATILAGFAQRYKERFDEDYSVIQLKNDDGSFWTNENY GIGLPKGDDKAKAEVNEALNEMHDSGEFQKIVAKNLGDNVDIGEKPKIGDLSFVDEK
Specific function: Part of the binding-protein-dependent transport system for glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32270; Mature: 32139
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFKSALKRLTAAVVATASVVALTACGSGGARDLLADIESGHVVMGTKYDQPNLGERTP CCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCC DKQFAGLDTDVSRYVVEYIAKKHGWATPEIEWRETPSAQRETLINNGEVNMITATYSINK CHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECC GRLKAVDFAGPYVVTHQALLVREDSGINGLNDIAPGTRLCSVSGSTPAQKVKDALPEVQL CCEEEEECCCCCCEEEEEEEEECCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHCCCCHH QEFDTYAACAEGLKQGVVDATTTDATILAGFAQRYKERFDEDYSVIQLKNDDGSFWTNEN HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCC YGIGLPKGDDKAKAEVNEALNEMHDSGEFQKIVAKNLGDNVDIGEKPKIGDLSFVDEK CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STFKSALKRLTAAVVATASVVALTACGSGGARDLLADIESGHVVMGTKYDQPNLGERTP CHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCC DKQFAGLDTDVSRYVVEYIAKKHGWATPEIEWRETPSAQRETLINNGEVNMITATYSINK CHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECC GRLKAVDFAGPYVVTHQALLVREDSGINGLNDIAPGTRLCSVSGSTPAQKVKDALPEVQL CCEEEEECCCCCCEEEEEEEEECCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHCCCCHH QEFDTYAACAEGLKQGVVDATTTDATILAGFAQRYKERFDEDYSVIQLKNDDGSFWTNEN HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCC YGIGLPKGDDKAKAEVNEALNEMHDSGEFQKIVAKNLGDNVDIGEKPKIGDLSFVDEK CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]