| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is tnp3506g
Identifier: 68535705
GI number: 68535705
Start: 762299
End: 763537
Strand: Direct
Name: tnp3506g
Synonym: jk0633
Alternate gene names: NA
Gene position: 762299-763537 (Clockwise)
Preceding gene: 68535703
Following gene: 68535706
Centisome position: 30.96
GC content: 57.55
Gene sequence:
>1239_bases ATGACCGCTGCACCGTATTCTATCGACCCGACAACCTATCTGGATGATTTGCTGGCCCAAGCGTCTCCGGATTTGATGCG CCAGATGCTGCAAGGGTTTATCAACCAGATCCTCTCCGCCCAGGCTGACACCGTCTGCGGCGCCGAATACGGGGTTGTAT CCACCGAGCGGGTCAACCACCGCAACGGGTATCGCCACCGCGACCTTGACACCCGTGTCGGCACGATCGACGTGGCGGTG CCGAAACTGCGCCACGGCGCGTTCTTCCCAGACTGGCTGTTAGAGCGCCGCTCACGAGCAGAACGAGCCTTATCGACTGT GATCGCCACGTGCTACCTTAAGGGGGTTTCCACCCGCAGGATGAATGATCTGGTGGCTACACTTGGGATTTCCAGCATGT CGAAATCGCAAGTCTCACGCATGTCAGAAGAACTCGACGACATGGTCGCAGACTTCAAAAACCGCCCACTAGACCCCGGC GGGTACGCCTTTTTATCGTGCGATGCGCTCACGATCAAAGTCCGTGAAGGCGGCCGGGTGGTCAAATGCTCAGTGCTGCT TGCCACCGGAGTCAACGCCGACGGGTATCGCGAAATGCTCGGCATGCACGTCGCCACCGCGGAATCCAACGCGTCGTGGA AAGGCTTCTTCCAGGACTTAAAAGCCCGCGGACTTACTGGGGTATTCCTTATCACCAGTGATGCCCACGAAGGCATCCAG CACGCCATTTCCGAAGTGCTGCCCAATGCGTCGTGGCAGCGGTGCCGCACCCATTTCGCGAAGAACCTCTACGAAAAGGT CCCGAAAACACAATGGCCGATGGTCTCTGCGATGTTCCAGACAATCTTCCAGCAACCTGACGCCACATCCACTTGGGCTC AAGCCCGCGAAGTTGTCGACCTACTGGAGCCGAAATTCCCTCACGTCGCGGCGTATTTGGAGGAATCACTCGATGAAGTA CTGGCGTTTACCGCAGTGCCGAAACCAGTCTGGACGAAGGTGTGGTCAAACAACCCCACAGAACGGTTAAACCGAGAGAT CCGCCGGCGCACCGACGTCGTCGGCATTTTCCCAAACCGTGAATCCATCATCCGGCTTGTCGGTGCGGTCCTAGCCGAGC AACACGACGATTGGATCCAACAAAAACGCTACATGTCACTGACCGCACTCGAACACACCAAGCACCTCATGCACCACCCA GGAGAACATCGTGACGACCACCACCAGCTAACCGCCTAA
Upstream 100 bases:
>100_bases GTGTAACGCTTGCTGATGGTGGATCCCGGAAAGTAGTGGGCGGCCACCGCCAGTTAGCCTTTCAACTCAACTACCACATC TCACCGAAAGGCCTATGACG
Downstream 100 bases:
>100_bases CCAAGCCCCGAACTTCATATCGAGCCGAAAGCACAAACGGCTACACCACTACACCGGACTTGACCTTCGGTAAATCCCCG TGGCGCCTGGAACCGTTCAT
Product: transposase for IS3506g
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTAAPYSIDPTTYLDDLLAQASPDLMRQMLQGFINQILSAQADTVCGAEYGVVSTERVNHRNGYRHRDLDTRVGTIDVAV PKLRHGAFFPDWLLERRSRAERALSTVIATCYLKGVSTRRMNDLVATLGISSMSKSQVSRMSEELDDMVADFKNRPLDPG GYAFLSCDALTIKVREGGRVVKCSVLLATGVNADGYREMLGMHVATAESNASWKGFFQDLKARGLTGVFLITSDAHEGIQ HAISEVLPNASWQRCRTHFAKNLYEKVPKTQWPMVSAMFQTIFQQPDATSTWAQAREVVDLLEPKFPHVAAYLEESLDEV LAFTAVPKPVWTKVWSNNPTERLNREIRRRTDVVGIFPNRESIIRLVGAVLAEQHDDWIQQKRYMSLTALEHTKHLMHHP GEHRDDHHQLTA
Sequences:
>Translated_412_residues MTAAPYSIDPTTYLDDLLAQASPDLMRQMLQGFINQILSAQADTVCGAEYGVVSTERVNHRNGYRHRDLDTRVGTIDVAV PKLRHGAFFPDWLLERRSRAERALSTVIATCYLKGVSTRRMNDLVATLGISSMSKSQVSRMSEELDDMVADFKNRPLDPG GYAFLSCDALTIKVREGGRVVKCSVLLATGVNADGYREMLGMHVATAESNASWKGFFQDLKARGLTGVFLITSDAHEGIQ HAISEVLPNASWQRCRTHFAKNLYEKVPKTQWPMVSAMFQTIFQQPDATSTWAQAREVVDLLEPKFPHVAAYLEESLDEV LAFTAVPKPVWTKVWSNNPTERLNREIRRRTDVVGIFPNRESIIRLVGAVLAEQHDDWIQQKRYMSLTALEHTKHLMHHP GEHRDDHHQLTA >Mature_411_residues TAAPYSIDPTTYLDDLLAQASPDLMRQMLQGFINQILSAQADTVCGAEYGVVSTERVNHRNGYRHRDLDTRVGTIDVAVP KLRHGAFFPDWLLERRSRAERALSTVIATCYLKGVSTRRMNDLVATLGISSMSKSQVSRMSEELDDMVADFKNRPLDPGG YAFLSCDALTIKVREGGRVVKCSVLLATGVNADGYREMLGMHVATAESNASWKGFFQDLKARGLTGVFLITSDAHEGIQH AISEVLPNASWQRCRTHFAKNLYEKVPKTQWPMVSAMFQTIFQQPDATSTWAQAREVVDLLEPKFPHVAAYLEESLDEVL AFTAVPKPVWTKVWSNNPTERLNREIRRRTDVVGIFPNRESIIRLVGAVLAEQHDDWIQQKRYMSLTALEHTKHLMHHPG EHRDDHHQLTA
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 46441; Mature: 46310
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPYSIDPTTYLDDLLAQASPDLMRQMLQGFINQILSAQADTVCGAEYGVVSTERVNH CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHC RNGYRHRDLDTRVGTIDVAVPKLRHGAFFPDWLLERRSRAERALSTVIATCYLKGVSTRR CCCCCCCCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH MNDLVATLGISSMSKSQVSRMSEELDDMVADFKNRPLDPGGYAFLSCDALTIKVREGGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEEEECCCEE VKCSVLLATGVNADGYREMLGMHVATAESNASWKGFFQDLKARGLTGVFLITSDAHEGIQ EEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHH HAISEVLPNASWQRCRTHFAKNLYEKVPKTQWPMVSAMFQTIFQQPDATSTWAQAREVVD HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH LLEPKFPHVAAYLEESLDEVLAFTAVPKPVWTKVWSNNPTERLNREIRRRTDVVGIFPNR HHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCH ESIIRLVGAVLAEQHDDWIQQKRYMSLTALEHTKHLMHHPGEHRDDHHQLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TAAPYSIDPTTYLDDLLAQASPDLMRQMLQGFINQILSAQADTVCGAEYGVVSTERVNH CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHC RNGYRHRDLDTRVGTIDVAVPKLRHGAFFPDWLLERRSRAERALSTVIATCYLKGVSTRR CCCCCCCCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH MNDLVATLGISSMSKSQVSRMSEELDDMVADFKNRPLDPGGYAFLSCDALTIKVREGGRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEEEECCCEE VKCSVLLATGVNADGYREMLGMHVATAESNASWKGFFQDLKARGLTGVFLITSDAHEGIQ EEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHH HAISEVLPNASWQRCRTHFAKNLYEKVPKTQWPMVSAMFQTIFQQPDATSTWAQAREVVD HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH LLEPKFPHVAAYLEESLDEVLAFTAVPKPVWTKVWSNNPTERLNREIRRRTDVVGIFPNR HHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCH ESIIRLVGAVLAEQHDDWIQQKRYMSLTALEHTKHLMHHPGEHRDDHHQLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972 [H]