| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 77761082
Identifier: 77761082
GI number: 77761082
Start: 401192
End: 401983
Strand: Reverse
Name: 77761082
Synonym: XC_0340
Alternate gene names: NA
Gene position: 401983-401192 (Counterclockwise)
Preceding gene: 66766684
Following gene: 66766682
Centisome position: 7.81
GC content: 57.95
Gene sequence:
>792_bases ATGTTCTCCATCTTCAAGAAGCAAGCCGCTCCATTACTGATTGTTCGTGCCGATGGGCGGGAGTTGTGTCGCATTAGCCA GAGTGATGTCCCGTGTGAGATCAAGCCTTCCGCATGGTTGAAAGCCGATAGCGTCCTGGAATTTACCGACTCGGCGGGAG GTGTGCATCGGCATGAACTTGGTGCTGCAACAGGATGGTTCCACTTCTCCATTCGCGTACATCCCAACCTGGGGTGCCAG GCAGACTGTGTCATTTCCCAGACCGAGCAGCTCGATCCAGACGCGTTTGCGAATGGGCACGCAGACGGGATCAGATTTCA GCCGTTCTTCCTGCCGGGCGCCAGCGTCAGCAGTACCGCACTTGCAGGCAAGGGGCTTTTTGCCAGGGGTCTGCACTTCA GTGGACTAGTCACCGGCGGCAACGTACTGCTTTCCTGTGAATGCGACCACTGCAAACGTTCTTTCCTGATCCGTTCCTAC CACGCCGGCTTCAGCAACGCGGGCTATTTCTACTCGGAATCCGGCAGGTACACCATCACGGTGGAGGACCACATTGCCGG CAGTCCGGCCGCATTGACAGAGCCGGACCCCGAGCAGCTGCATGCACTGGAAGAACGGCTTCCGCTGGCACCGGATGGGT CGGCCTATCGCTATATGAATCCGTTCCGCTGCCCACACTGCGCTGCGCCCTATATCGACTTTGCAGCACACCCCGGCCTT CGAAAGAACGAGTACTACGGCAACTACTTTGTCGGCAGCGATCTGCTGCGATATACGCCAGCCGATCCCTGA
Upstream 100 bases:
>100_bases GGGCAAGCGCGGCGTCTGACGTTTTGAAGAGCTAAAATTGTTCTGCTGCGCTCGCGCCAGCGCTCCAATCTGTCATTCCA GCATTACCGTCAAGGAACGC
Downstream 100 bases:
>100_bases GCCGCATCTGCTTACGGCGTCTCTGCTGTCGCGGTAGGCAAAGCTATTAGCGGGCTGAGGCTTGAATTTTGCGTAGCTTT GCCTGGTAATCAGAGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MFSIFKKQAAPLLIVRADGRELCRISQSDVPCEIKPSAWLKADSVLEFTDSAGGVHRHELGAATGWFHFSIRVHPNLGCQ ADCVISQTEQLDPDAFANGHADGIRFQPFFLPGASVSSTALAGKGLFARGLHFSGLVTGGNVLLSCECDHCKRSFLIRSY HAGFSNAGYFYSESGRYTITVEDHIAGSPAALTEPDPEQLHALEERLPLAPDGSAYRYMNPFRCPHCAAPYIDFAAHPGL RKNEYYGNYFVGSDLLRYTPADP
Sequences:
>Translated_263_residues MFSIFKKQAAPLLIVRADGRELCRISQSDVPCEIKPSAWLKADSVLEFTDSAGGVHRHELGAATGWFHFSIRVHPNLGCQ ADCVISQTEQLDPDAFANGHADGIRFQPFFLPGASVSSTALAGKGLFARGLHFSGLVTGGNVLLSCECDHCKRSFLIRSY HAGFSNAGYFYSESGRYTITVEDHIAGSPAALTEPDPEQLHALEERLPLAPDGSAYRYMNPFRCPHCAAPYIDFAAHPGL RKNEYYGNYFVGSDLLRYTPADP >Mature_263_residues MFSIFKKQAAPLLIVRADGRELCRISQSDVPCEIKPSAWLKADSVLEFTDSAGGVHRHELGAATGWFHFSIRVHPNLGCQ ADCVISQTEQLDPDAFANGHADGIRFQPFFLPGASVSSTALAGKGLFARGLHFSGLVTGGNVLLSCECDHCKRSFLIRSY HAGFSNAGYFYSESGRYTITVEDHIAGSPAALTEPDPEQLHALEERLPLAPDGSAYRYMNPFRCPHCAAPYIDFAAHPGL RKNEYYGNYFVGSDLLRYTPADP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28776; Mature: 28776
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIFKKQAAPLLIVRADGRELCRISQSDVPCEIKPSAWLKADSVLEFTDSAGGVHRHEL CCCCCHHCCCCEEEEECCCHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCCCCEEHHHC GAATGWFHFSIRVHPNLGCQADCVISQTEQLDPDAFANGHADGIRFQPFFLPGASVSSTA CCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCHHCCCCCCCEEEEEEECCCCCCCCCE LAGKGLFARGLHFSGLVTGGNVLLSCECDHCKRSFLIRSYHAGFSNAGYFYSESGRYTIT ECCCCCEECCCEEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEE VEDHIAGSPAALTEPDPEQLHALEERLPLAPDGSAYRYMNPFRCPHCAAPYIDFAAHPGL EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHHHCCCCC RKNEYYGNYFVGSDLLRYTPADP CCCCCCCCEEECCCCEECCCCCC >Mature Secondary Structure MFSIFKKQAAPLLIVRADGRELCRISQSDVPCEIKPSAWLKADSVLEFTDSAGGVHRHEL CCCCCHHCCCCEEEEECCCHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCCCCEEHHHC GAATGWFHFSIRVHPNLGCQADCVISQTEQLDPDAFANGHADGIRFQPFFLPGASVSSTA CCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCHHCCCCCCCEEEEEEECCCCCCCCCE LAGKGLFARGLHFSGLVTGGNVLLSCECDHCKRSFLIRSYHAGFSNAGYFYSESGRYTIT ECCCCCEECCCEEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEE VEDHIAGSPAALTEPDPEQLHALEERLPLAPDGSAYRYMNPFRCPHCAAPYIDFAAHPGL EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHHHCCCCC RKNEYYGNYFVGSDLLRYTPADP CCCCCCCCEEECCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA