| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767125
Identifier: 66767125
GI number: 66767125
Start: 946617
End: 947885
Strand: Reverse
Name: 66767125
Synonym: XC_0792
Alternate gene names: NA
Gene position: 947885-946617 (Counterclockwise)
Preceding gene: 66767126
Following gene: 66767124
Centisome position: 18.41
GC content: 69.58
Gene sequence:
>1269_bases ATGTTCCGCCGCCCGCGCCTGCGTGCGTTGTCCGCATTGGTGCTGGCTGCGCTGACATTGCCGGCAGTTGCGCAGCAGGT GCTGATTCGCGGCGCCACCGTGCATACCGCCACCAGCCAGGGCACGTTGCGCAATACCGATGTCCTGGTGCAGGGTGGCG TGATTCGCGCCATCGGCACTGGCCTTGCCGTGCCCACCCACGGCCGCGTGGTCGAGGCCAAGGGCCGCCCGCTGACGCCG GCCCTGTTTGGCGGCATCACCGAGATCGGTATCGAAGAAGTGTCTGGCGAAGCCGCCACGGTGGACAGCGGCGTCAAGCT GACCGAGCAGCCGATGCGCCCGGAATTCGACGTCACCCTGGCCTACAACCCGGACTCGGTGCTGATCCCGGTGGCACGCG TGGAAGGCATCGGCTTCACCGCGCTCGGGGCGACCACCAGCGGCGCGTTCATCGCCGGCCAAGGCGGCATCGTGCGCCTG GATGGCGGCCCGGATCCGGTCGGCCCGCATGCCCTGTTCGTTCGTCTGGGTGCGGCCGCGTCGGACCTGACCGGCAGCTC GCGCGCCGCGCAGTGGATGCTGCTCGATCAACTGGTGGCCGAAGCACGCGGGCGCGTGCCGGCAGACTCGCCGCATGCCT TGCTGACCCCGGTTGGCCGCAGCGTGCTGGCCAACTATTTGGCCGGCCGGGGCCGCATCGTGGTGCAGGTGGAACGGGCT GCGGACATCCGCCAGCTGTTGCGTTGGGCGCAGCGCGAGAAGGTGCGCATTGCCATTGCCGGCGGCACCGAAGCGTGGAA GCTCGCCCCGCAGCTGGCGCAGGCCAAGGTGCCGGTGCTGGTGGATGCGTTGGCAGATCTGCCTTCCACCTTCGACCAGA TCGGCGCCACGCTGGAAAACGCCGCACGCCTGCGCGCGGCCGGCGTGGAGGTGAGCTTCACCCAGAGCGGCGATGCCTCG CACAACGCACGCAAGCTGCGTCAGCTGGCCGGTAATGCCGTGGCCAATGGCCTGCCATGGGAATCCGGCCTGGCCGGGCT GACCCGCGTGCCGGCGGAAATCTTTGGCGTGGGCGATCGCATCGGCAGCATTGCGGTGGGCAAGCAGGCCGACCTGGTGC TGTGGGACGGCGACCCGCTGGATGTGGCGCATTACGCCGAACAGGTCTGGATGGGCGGGCGCGACATGCCGATGCGCTCG CGCCAGACCGATCTGCGCGACCGCTATCTGCAGCAGGCCGGCCCGTTGCCACGCGCCTACCAACGCTGA
Upstream 100 bases:
>100_bases TGTATATCGACGGCGCGCAGGTGTACGACCGCCACGACCGCAGGTTGCAACCGGTCTCCGACTTCATGCTGGGCCAGGAG GTGGCACGATGAGCCGCGCC
Downstream 100 bases:
>100_bases GCTGCGCGGCGCGGCGCCGCGCACGGCTGCGTCGCTGACAGTGGTCGCAGCACGCTGTAAGCGCCGCATCGCGGCGCCGC GCAGTGCAACACACTGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Imidazolonepropionase; Amidohydrolase Imidazolonepropionase; Metal-Dependent Hydrolase Superfamily Protein; Imidazolonepropionase And Related Amidohydrolases; Dihydroorotase; Amidohydrolase Protein; Metallo-Dependent Hydrolase; Aminohydrolase; N-Acetylglucosamine-6-Phosphate Deacetylase; Imidazolonepropionase Or Related Amidohydrolase; Secreted Protein
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MFRRPRLRALSALVLAALTLPAVAQQVLIRGATVHTATSQGTLRNTDVLVQGGVIRAIGTGLAVPTHGRVVEAKGRPLTP ALFGGITEIGIEEVSGEAATVDSGVKLTEQPMRPEFDVTLAYNPDSVLIPVARVEGIGFTALGATTSGAFIAGQGGIVRL DGGPDPVGPHALFVRLGAAASDLTGSSRAAQWMLLDQLVAEARGRVPADSPHALLTPVGRSVLANYLAGRGRIVVQVERA ADIRQLLRWAQREKVRIAIAGGTEAWKLAPQLAQAKVPVLVDALADLPSTFDQIGATLENAARLRAAGVEVSFTQSGDAS HNARKLRQLAGNAVANGLPWESGLAGLTRVPAEIFGVGDRIGSIAVGKQADLVLWDGDPLDVAHYAEQVWMGGRDMPMRS RQTDLRDRYLQQAGPLPRAYQR
Sequences:
>Translated_422_residues MFRRPRLRALSALVLAALTLPAVAQQVLIRGATVHTATSQGTLRNTDVLVQGGVIRAIGTGLAVPTHGRVVEAKGRPLTP ALFGGITEIGIEEVSGEAATVDSGVKLTEQPMRPEFDVTLAYNPDSVLIPVARVEGIGFTALGATTSGAFIAGQGGIVRL DGGPDPVGPHALFVRLGAAASDLTGSSRAAQWMLLDQLVAEARGRVPADSPHALLTPVGRSVLANYLAGRGRIVVQVERA ADIRQLLRWAQREKVRIAIAGGTEAWKLAPQLAQAKVPVLVDALADLPSTFDQIGATLENAARLRAAGVEVSFTQSGDAS HNARKLRQLAGNAVANGLPWESGLAGLTRVPAEIFGVGDRIGSIAVGKQADLVLWDGDPLDVAHYAEQVWMGGRDMPMRS RQTDLRDRYLQQAGPLPRAYQR >Mature_422_residues MFRRPRLRALSALVLAALTLPAVAQQVLIRGATVHTATSQGTLRNTDVLVQGGVIRAIGTGLAVPTHGRVVEAKGRPLTP ALFGGITEIGIEEVSGEAATVDSGVKLTEQPMRPEFDVTLAYNPDSVLIPVARVEGIGFTALGATTSGAFIAGQGGIVRL DGGPDPVGPHALFVRLGAAASDLTGSSRAAQWMLLDQLVAEARGRVPADSPHALLTPVGRSVLANYLAGRGRIVVQVERA ADIRQLLRWAQREKVRIAIAGGTEAWKLAPQLAQAKVPVLVDALADLPSTFDQIGATLENAARLRAAGVEVSFTQSGDAS HNARKLRQLAGNAVANGLPWESGLAGLTRVPAEIFGVGDRIGSIAVGKQADLVLWDGDPLDVAHYAEQVWMGGRDMPMRS RQTDLRDRYLQQAGPLPRAYQR
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44513; Mature: 44513
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRPRLRALSALVLAALTLPAVAQQVLIRGATVHTATSQGTLRNTDVLVQGGVIRAIGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCEEEECCC GLAVPTHGRVVEAKGRPLTPALFGGITEIGIEEVSGEAATVDSGVKLTEQPMRPEFDVTL CCCCCCCCCEEECCCCCCCHHHHCCHHHHHHHHHCCCCEECCCCCEECCCCCCCCEEEEE AYNPDSVLIPVARVEGIGFTALGATTSGAFIAGQGGIVRLDGGPDPVGPHALFVRLGAAA EECCCCEEEEEEHCCCCCEEEECCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEECCCH SDLTGSSRAAQWMLLDQLVAEARGRVPADSPHALLTPVGRSVLANYLAGRGRIVVQVERA HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHH ADIRQLLRWAQREKVRIAIAGGTEAWKLAPQLAQAKVPVLVDALADLPSTFDQIGATLEN HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHH AARLRAAGVEVSFTQSGDASHNARKLRQLAGNAVANGLPWESGLAGLTRVPAEIFGVGDR HHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHCCHHHHCCCHH IGSIAVGKQADLVLWDGDPLDVAHYAEQVWMGGRDMPMRSRQTDLRDRYLQQAGPLPRAY HCCEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH QR CC >Mature Secondary Structure MFRRPRLRALSALVLAALTLPAVAQQVLIRGATVHTATSQGTLRNTDVLVQGGVIRAIGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCEEEECCC GLAVPTHGRVVEAKGRPLTPALFGGITEIGIEEVSGEAATVDSGVKLTEQPMRPEFDVTL CCCCCCCCCEEECCCCCCCHHHHCCHHHHHHHHHCCCCEECCCCCEECCCCCCCCEEEEE AYNPDSVLIPVARVEGIGFTALGATTSGAFIAGQGGIVRLDGGPDPVGPHALFVRLGAAA EECCCCEEEEEEHCCCCCEEEECCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEECCCH SDLTGSSRAAQWMLLDQLVAEARGRVPADSPHALLTPVGRSVLANYLAGRGRIVVQVERA HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHH ADIRQLLRWAQREKVRIAIAGGTEAWKLAPQLAQAKVPVLVDALADLPSTFDQIGATLEN HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHH AARLRAAGVEVSFTQSGDASHNARKLRQLAGNAVANGLPWESGLAGLTRVPAEIFGVGDR HHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHCCHHHHCCCHH IGSIAVGKQADLVLWDGDPLDVAHYAEQVWMGGRDMPMRSRQTDLRDRYLQQAGPLPRAY HCCEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH QR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA