| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yecE [H]
Identifier: 66766970
GI number: 66766970
Start: 752672
End: 753463
Strand: Reverse
Name: yecE [H]
Synonym: XC_0632
Alternate gene names: 66766970
Gene position: 753463-752672 (Counterclockwise)
Preceding gene: 66766973
Following gene: 77761100
Centisome position: 14.63
GC content: 71.46
Gene sequence:
>792_bases GTGTCCACCTCCGCACCGCCCCCGCAGCCCGCTGCCACCGCCCTGCCACGGGTGTATTGCGGCTGCGCGGGCTGGTCGAT TCCCGCAGCCGAGCGCGCACAGTTCGGCGCCGGCAGCAGCGTGCTGCAGCGCTATGCCACGCGCCTGAATGCAGTGGAGA TCAACTCCTCGTTCTATCGCCCGCATCGCACGTCGACCTACGCGCGTTGGGCCGACAGCGTGCCGACGCACTTCCGCTTC TCGGTCAAGCTGCCGCGCAGCATCAGCCACGATGCGCGCCTGCACCAGGCCGGTCCATTGCTGGATGCGTTCCTGGCGCA GGCGGGCGCGCTGGGCGAGCGCCTGGGCTGCCTGCTGCTGCAGTTGCCGCCCAGTGCGGTGTTCGATGCACGCGTGGCGG CCAGCTTCTTTGCCGTCCTGCGCCGGCGCTGGGACGGCGCAGTGGTGTGCGAGCCGCGCCATCCCAGCTGGTTCACCGCC CAGGCGCAGGCGCTGCTGCACCGCCACCGCATCGCGCGGTGTGCGGCCGACCCGGCACCGGTGCCTGCCGCCGCGCTGCC CGACGCGCCAGGCATGCCCGGCGCGCCGGCATATTGGCGCTGGCACGGCACCCCCAAGGTCTATTACAGCGGATACGACA ACGCCGCCTTGCAGCGCCTGGCGGCCGCGGTCCGCAGCGGCATGGCCGCGCATGCGGCGAACGAGCAGTGGGTGATCTTC GACAACACCGCTGCCGGGCTGGCCGTGCCCAATGCCTTGCAGCTGCAGAAGCTGTTGGGAATCGGCCGCTAG
Upstream 100 bases:
>100_bases GGGACCTTCAGGCATGCCATCAGTATCGAAGCGCGGCGTGAGTCGGCCGTGAGCGCAGTGCAGACATCGTGCAGACGCGC CTGCCTGCATACAGTGCGGC
Downstream 100 bases:
>100_bases CGCGCGGTGGCGCGCATCTTGCAGCAGCCATGACGTGTGACACGCACCGCCGTGTGCTCAAGCTGCGCTGGCACGGGCCG ATAGGCCTGAATCGGCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSTSAPPPQPAATALPRVYCGCAGWSIPAAERAQFGAGSSVLQRYATRLNAVEINSSFYRPHRTSTYARWADSVPTHFRF SVKLPRSISHDARLHQAGPLLDAFLAQAGALGERLGCLLLQLPPSAVFDARVAASFFAVLRRRWDGAVVCEPRHPSWFTA QAQALLHRHRIARCAADPAPVPAAALPDAPGMPGAPAYWRWHGTPKVYYSGYDNAALQRLAAAVRSGMAAHAANEQWVIF DNTAAGLAVPNALQLQKLLGIGR
Sequences:
>Translated_263_residues MSTSAPPPQPAATALPRVYCGCAGWSIPAAERAQFGAGSSVLQRYATRLNAVEINSSFYRPHRTSTYARWADSVPTHFRF SVKLPRSISHDARLHQAGPLLDAFLAQAGALGERLGCLLLQLPPSAVFDARVAASFFAVLRRRWDGAVVCEPRHPSWFTA QAQALLHRHRIARCAADPAPVPAAALPDAPGMPGAPAYWRWHGTPKVYYSGYDNAALQRLAAAVRSGMAAHAANEQWVIF DNTAAGLAVPNALQLQKLLGIGR >Mature_262_residues STSAPPPQPAATALPRVYCGCAGWSIPAAERAQFGAGSSVLQRYATRLNAVEINSSFYRPHRTSTYARWADSVPTHFRFS VKLPRSISHDARLHQAGPLLDAFLAQAGALGERLGCLLLQLPPSAVFDARVAASFFAVLRRRWDGAVVCEPRHPSWFTAQ AQALLHRHRIARCAADPAPVPAAALPDAPGMPGAPAYWRWHGTPKVYYSGYDNAALQRLAAAVRSGMAAHAANEQWVIFD NTAAGLAVPNALQLQKLLGIGR
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
Organism=Escherichia coli, GI1788175, Length=217, Percent_Identity=31.3364055299539, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 28337; Mature: 28205
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSAPPPQPAATALPRVYCGCAGWSIPAAERAQFGAGSSVLQRYATRLNAVEINSSFYR CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCEEEECCCCCC PHRTSTYARWADSVPTHFRFSVKLPRSISHDARLHQAGPLLDAFLAQAGALGERLGCLLL CCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEE QLPPSAVFDARVAASFFAVLRRRWDGAVVCEPRHPSWFTAQAQALLHRHRIARCAADPAP ECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC VPAAALPDAPGMPGAPAYWRWHGTPKVYYSGYDNAALQRLAAAVRSGMAAHAANEQWVIF CCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHCHHHHCCCCCEEEE DNTAAGLAVPNALQLQKLLGIGR ECCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure STSAPPPQPAATALPRVYCGCAGWSIPAAERAQFGAGSSVLQRYATRLNAVEINSSFYR CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCEEEECCCCCC PHRTSTYARWADSVPTHFRFSVKLPRSISHDARLHQAGPLLDAFLAQAGALGERLGCLLL CCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEE QLPPSAVFDARVAASFFAVLRRRWDGAVVCEPRHPSWFTAQAQALLHRHRIARCAADPAP ECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC VPAAALPDAPGMPGAPAYWRWHGTPKVYYSGYDNAALQRLAAAVRSGMAAHAANEQWVIF CCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHCHHHHCCCCCEEEE DNTAAGLAVPNALQLQKLLGIGR ECCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]