| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66766944
Identifier: 66766944
GI number: 66766944
Start: 722239
End: 723393
Strand: Reverse
Name: 66766944
Synonym: XC_0605
Alternate gene names: NA
Gene position: 723393-722239 (Counterclockwise)
Preceding gene: 66766945
Following gene: 66766943
Centisome position: 14.05
GC content: 68.92
Gene sequence:
>1155_bases GTGGCGGTGAAGCGCCCGCGCCTGCTGTACCTGGCCACCGCCGACGCACGCGGCCACCTGATGCGCGCACAGCTGCTGAC GCATGCGTTGCAGGCGCAGGGCGCCGCGGTCGAGGTCATCACCACCTCGGCAGCCGGCGCACGGTTTCTCCACACCTTTG ACATCCAGGCGAGCGTGTTGTCGCCGCATTACGCCGTGCAGTTCGATGCGCGCCAGAACATGCGCGCGGCCGCCACCGAT GCCAACGTCGCCGCCTATTTGCTGCATCCGGCGCGGCTGCTGCGCGATGTCCTGCAACTGCAGCGACGCCTGCGTGAGGT CGACCTGGTCCTCAACGATTCCTTCCATCCGGCGCTGCTGGTGATGGGCATGCTGCCGGTCTGGCGGCACAAGATCGTGC ACATCTATGGCGGCAGCTTGCGCGCCGCACTGCAGGGCAATTTCGAAGGCCGGCTGCCGCGCGTGCTGGCTGCGCTGTTC TCAGGCGCCATCGGCTGGCAGATCGACCGCGCCGCCGCGCAACTGGAGCACGACTTCGCGCAAAGCCAACCGCAGGCCAG CGGACGACGCGTGCGGCTGCCAACGCCGGTAGCGATTGCATCCCCATCTGCCACCCCCACGGCGCCAATGGCCGCGGTCT ATCTCAACCCGCACTTCCGCGATCCCGCGCTCGCGCAGGCACTGGAGCTAGGACTGAGACGCGCGGGATTGGGCAGCCTG TGTGTCGGCGAAGGCTATGCGCAGCGCCCCGGCTGGCAGGCCGACCACCCACAGTGGATCGACCACGCCGCAACCAGCAC GCTGCTGATCTCGGCGCCCGGCATGGCCGCGCTATCGATTGCGCTGGTGTACCGGCGGCCCATCCTGCTGATCGTCACCG GGCAGCCGGAGCAGCAACGCAATGCCGCGCATGCCGCAACCTGCGGCCTGGCGCATCAAATCGTTGCGTGGACGGGCGAT GCAGACGCCTTTGCGCATGCCATCCACCACGCCTGCGACGCGTTGCGCGCAACCCCGCCCGCCGCCGGGCACGACGCGTC CACGCTGGACGCGCCACAGCGCCTGCAGCTGTGGGTCAGCCTGATCCTGGCCTTGGCACGCGGCGCACCTGCACAGGCAT GGGTGGAACTCACAGCCACCGGACAGCACGCATGA
Upstream 100 bases:
>100_bases CACTGCTGGCGAAGGTGCGGCGGATCGACCGTGCATTCGGCATCAGTGGTGCGTTCGGCATGTATGCCGCCGGTGCGGTG CTGCGTGTACGGGCTTACCT
Downstream 100 bases:
>100_bases GCGCCACGGTGCCGATAGCGCTTGCCCGCCTGCAGCCCTGGCGCAGCGGCATGGCACTGGCCGCCGACTGGGCCGTGATC GCGCTGTGCTTTGGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MAVKRPRLLYLATADARGHLMRAQLLTHALQAQGAAVEVITTSAAGARFLHTFDIQASVLSPHYAVQFDARQNMRAAATD ANVAAYLLHPARLLRDVLQLQRRLREVDLVLNDSFHPALLVMGMLPVWRHKIVHIYGGSLRAALQGNFEGRLPRVLAALF SGAIGWQIDRAAAQLEHDFAQSQPQASGRRVRLPTPVAIASPSATPTAPMAAVYLNPHFRDPALAQALELGLRRAGLGSL CVGEGYAQRPGWQADHPQWIDHAATSTLLISAPGMAALSIALVYRRPILLIVTGQPEQQRNAAHAATCGLAHQIVAWTGD ADAFAHAIHHACDALRATPPAAGHDASTLDAPQRLQLWVSLILALARGAPAQAWVELTATGQHA
Sequences:
>Translated_384_residues MAVKRPRLLYLATADARGHLMRAQLLTHALQAQGAAVEVITTSAAGARFLHTFDIQASVLSPHYAVQFDARQNMRAAATD ANVAAYLLHPARLLRDVLQLQRRLREVDLVLNDSFHPALLVMGMLPVWRHKIVHIYGGSLRAALQGNFEGRLPRVLAALF SGAIGWQIDRAAAQLEHDFAQSQPQASGRRVRLPTPVAIASPSATPTAPMAAVYLNPHFRDPALAQALELGLRRAGLGSL CVGEGYAQRPGWQADHPQWIDHAATSTLLISAPGMAALSIALVYRRPILLIVTGQPEQQRNAAHAATCGLAHQIVAWTGD ADAFAHAIHHACDALRATPPAAGHDASTLDAPQRLQLWVSLILALARGAPAQAWVELTATGQHA >Mature_383_residues AVKRPRLLYLATADARGHLMRAQLLTHALQAQGAAVEVITTSAAGARFLHTFDIQASVLSPHYAVQFDARQNMRAAATDA NVAAYLLHPARLLRDVLQLQRRLREVDLVLNDSFHPALLVMGMLPVWRHKIVHIYGGSLRAALQGNFEGRLPRVLAALFS GAIGWQIDRAAAQLEHDFAQSQPQASGRRVRLPTPVAIASPSATPTAPMAAVYLNPHFRDPALAQALELGLRRAGLGSLC VGEGYAQRPGWQADHPQWIDHAATSTLLISAPGMAALSIALVYRRPILLIVTGQPEQQRNAAHAATCGLAHQIVAWTGDA DAFAHAIHHACDALRATPPAAGHDASTLDAPQRLQLWVSLILALARGAPAQAWVELTATGQHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41253; Mature: 41122
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKRPRLLYLATADARGHLMRAQLLTHALQAQGAAVEVITTSAAGARFLHTFDIQASVL CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCHHHC SPHYAVQFDARQNMRAAATDANVAAYLLHPARLLRDVLQLQRRLREVDLVLNDSFHPALL CCCEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHH VMGMLPVWRHKIVHIYGGSLRAALQGNFEGRLPRVLAALFSGAIGWQIDRAAAQLEHDFA HHHHHHHHHHEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH QSQPQASGRRVRLPTPVAIASPSATPTAPMAAVYLNPHFRDPALAQALELGLRRAGLGSL HCCCCCCCCEEECCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE CVGEGYAQRPGWQADHPQWIDHAATSTLLISAPGMAALSIALVYRRPILLIVTGQPEQQR EECCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCHHHH NAAHAATCGLAHQIVAWTGDADAFAHAIHHACDALRATPPAAGHDASTLDAPQRLQLWVS HHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH LILALARGAPAQAWVELTATGQHA HHHHHHCCCCCHHEEEEEECCCCC >Mature Secondary Structure AVKRPRLLYLATADARGHLMRAQLLTHALQAQGAAVEVITTSAAGARFLHTFDIQASVL CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCHHHC SPHYAVQFDARQNMRAAATDANVAAYLLHPARLLRDVLQLQRRLREVDLVLNDSFHPALL CCCEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHH VMGMLPVWRHKIVHIYGGSLRAALQGNFEGRLPRVLAALFSGAIGWQIDRAAAQLEHDFA HHHHHHHHHHEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH QSQPQASGRRVRLPTPVAIASPSATPTAPMAAVYLNPHFRDPALAQALELGLRRAGLGSL HCCCCCCCCEEECCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE CVGEGYAQRPGWQADHPQWIDHAATSTLLISAPGMAALSIALVYRRPILLIVTGQPEQQR EECCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCHHHH NAAHAATCGLAHQIVAWTGDADAFAHAIHHACDALRATPPAAGHDASTLDAPQRLQLWVS HHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH LILALARGAPAQAWVELTATGQHA HHHHHHCCCCCHHEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA